RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 TCTAP57738 103 aa12.71□□□□□ -0.37
SBDSP1-202ENST00000423945 KIR3DS1Q14943 382 aa12.71□□□□□ -0.37
SBDSP1-202ENST00000423945 RRN3P1Q2M238 152 aa12.71□□□□□ -0.37
SBDSP1-202ENST00000423945 FAM167A-AS1Q96KT0 104 aa12.71□□□□□ -0.37
SBDSP1-202ENST00000423945 PARD6GQ9BYG4 376 aaPredicted RBP12.71□□□□□ -0.37
SBDSP1-202ENST00000423945 TMEM14CQ9P0S9 112 aa12.71□□□□□ -0.37
SBDSP1-202ENST00000423945 HSPB11Q9Y547 144 aa12.71□□□□□ -0.37
SBDSP1-202ENST00000423945 YTHDF2Q9Y5A9 579 aaKnown RBP12.71□□□□□ -0.37
SBDSP1-202ENST00000423945 DNAH10Q8IVF4 4471 aa12.7□□□□□ -0.38
SBDSP1-202ENST00000423945 TRBV19A0A075B6N1 114 aa12.7□□□□□ -0.38
SBDSP1-202ENST00000423945 ZNF705GA8MUZ8 300 aaPredicted RBP12.7□□□□□ -0.38
SBDSP1-202ENST00000423945 GUK1Q16774 197 aa12.7□□□□□ -0.38
SBDSP1-202ENST00000423945 MIR17HGQ75NE6 70 aa12.7□□□□□ -0.38
SBDSP1-202ENST00000423945 TMEM208Q9BTX3 173 aa12.7□□□□□ -0.38
SBDSP1-202ENST00000423945 SLC25A2Q9BXI2 301 aa12.7□□□□□ -0.38
SBDSP1-202ENST00000423945 MBD2Q9UBB5 411 aa12.7□□□□□ -0.38
SBDSP1-202ENST00000423945 FRAS1Q86XX4 4008 aa12.7□□□□□ -0.38
SBDSP1-202ENST00000423945 PLAC8L1A1L4L8 177 aa12.69□□□□□ -0.38
SBDSP1-202ENST00000423945 ZNF253O75346 499 aa12.69□□□□□ -0.38
SBDSP1-202ENST00000423945 PTTG1O95997 202 aa12.69□□□□□ -0.38
SBDSP1-202ENST00000423945 AZU1P20160 251 aa12.69□□□□□ -0.38
SBDSP1-202ENST00000423945 ATP5SQ99766 215 aa12.69□□□□□ -0.38
SBDSP1-202ENST00000423945 M0R3E3 92 aa12.68□□□□□ -0.38
SBDSP1-202ENST00000423945 HIST1H1EP10412 219 aaKnown RBP12.68□□□□□ -0.38
SBDSP1-202ENST00000423945 RPL12P30050 165 aaKnown RBP12.68□□□□□ -0.38
SBDSP1-202ENST00000423945 CDKN1BP46527 198 aa12.68□□□□□ -0.38
SBDSP1-202ENST00000423945 WFDC1Q9HC57 220 aa12.68□□□□□ -0.38
SBDSP1-202ENST00000423945 PET100P0DJ07 73 aa12.67□□□□□ -0.38
SBDSP1-202ENST00000423945 NIPSNAP3BQ9BS92 247 aa12.67□□□□□ -0.38
SBDSP1-202ENST00000423945 SMIM3Q9BZL3 60 aa12.67□□□□□ -0.38
SBDSP1-202ENST00000423945 PPP1R14DQ9NXH3 145 aa12.67□□□□□ -0.38
SBDSP1-202ENST00000423945 TEX48A0A1B0GUV7 120 aa12.66□□□□□ -0.38
SBDSP1-202ENST00000423945 NPIPB6E9PJ23 425 aa12.66□□□□□ -0.38
SBDSP1-202ENST00000423945 CT45A10P0DMU9 189 aa12.66□□□□□ -0.38
SBDSP1-202ENST00000423945 TSPOP30536 169 aa12.66□□□□□ -0.38
SBDSP1-202ENST00000423945 OXA1LQ15070 435 aa12.66□□□□□ -0.38
SBDSP1-202ENST00000423945 FCN2Q15485 313 aa12.66□□□□□ -0.38
SBDSP1-202ENST00000423945 OR10J6PQ8NGY7 276 aa12.66□□□□□ -0.38
SBDSP1-202ENST00000423945 PDE6HQ13956 83 aa12.65□□□□□ -0.38
SBDSP1-202ENST00000423945 GFI1BQ5VTD9 330 aa12.65□□□□□ -0.38
SBDSP1-202ENST00000423945 EXOC3-AS1Q8N2X6 119 aa12.65□□□□□ -0.38
SBDSP1-202ENST00000423945 BLNKQ8WV28 456 aa12.65□□□□□ -0.38
SBDSP1-202ENST00000423945 FXYD5Q96DB9 178 aa12.65□□□□□ -0.38
SBDSP1-202ENST00000423945 MRPL53Q96EL3 112 aaKnown RBP12.65□□□□□ -0.38
SBDSP1-202ENST00000423945 ZNF503Q96F45 646 aa12.65□□□□□ -0.38
SBDSP1-202ENST00000423945 LINC01587Q99440 93 aa12.65□□□□□ -0.38
SBDSP1-202ENST00000423945 MRPL32Q9BYC8 188 aaKnown RBP12.65□□□□□ -0.38
SBDSP1-202ENST00000423945 C17orf112F2Z3M2 114 aa12.64□□□□□ -0.39
SBDSP1-202ENST00000423945 ERCC8Q13216 396 aa12.64□□□□□ -0.39
SBDSP1-202ENST00000423945 TMEM256Q8N2U0 113 aa12.64□□□□□ -0.39
SBDSP1-202ENST00000423945 KCNIP2Q9NS61 270 aa12.64□□□□□ -0.39
SBDSP1-202ENST00000423945 FUT9Q9Y231 359 aa12.64□□□□□ -0.39
SBDSP1-202ENST00000423945 TIMM9Q9Y5J7 89 aa12.64□□□□□ -0.39
SBDSP1-202ENST00000423945 TAS2R60P59551 318 aa12.63□□□□□ -0.39
SBDSP1-202ENST00000423945 ODF3Q96PU9 254 aa12.63□□□□□ -0.39
SBDSP1-202ENST00000423945 OR51M1Q9H341 326 aa12.63□□□□□ -0.39
SBDSP1-202ENST00000423945 LYRM9A8MSI8 78 aa12.62□□□□□ -0.39
SBDSP1-202ENST00000423945 OR10J4P0C629 311 aa12.62□□□□□ -0.39
SBDSP1-202ENST00000423945 NBEAP1P0C6P0 100 aa12.62□□□□□ -0.39
SBDSP1-202ENST00000423945 DAD1P61803 113 aa12.62□□□□□ -0.39
SBDSP1-202ENST00000423945 ICAM4Q14773 271 aa12.62□□□□□ -0.39
SBDSP1-202ENST00000423945 Q5BKY6 102 aa12.62□□□□□ -0.39
SBDSP1-202ENST00000423945 FFAR4Q5NUL3 377 aa12.62□□□□□ -0.39
SBDSP1-202ENST00000423945 PHYHIPLQ96FC7 376 aa12.62□□□□□ -0.39
SBDSP1-202ENST00000423945 FAM19A4Q96LR4 140 aa12.62□□□□□ -0.39
SBDSP1-202ENST00000423945 C20orf144Q9BQM9 153 aa12.62□□□□□ -0.39
SBDSP1-202ENST00000423945 NDUFAF3Q9BU61 184 aa12.62□□□□□ -0.39
SBDSP1-202ENST00000423945 PAXXQ9BUH6 204 aa12.62□□□□□ -0.39
SBDSP1-202ENST00000423945 PRELID1Q9Y255 219 aa12.62□□□□□ -0.39
SBDSP1-202ENST00000423945 J3KRW8 73 aa12.61□□□□□ -0.39
SBDSP1-202ENST00000423945 EIF3GO75821 320 aaKnown RBP eCLIP12.61□□□□□ -0.39
SBDSP1-202ENST00000423945 IFNA5P01569 189 aa12.61□□□□□ -0.39
SBDSP1-202ENST00000423945 RNASE8Q8TDE3 154 aaKnown RBP12.61□□□□□ -0.39
SBDSP1-202ENST00000423945 AGPAT4-IT1Q9H0P7 198 aa12.61□□□□□ -0.39
SBDSP1-202ENST00000423945 MED28Q9H204 178 aa12.61□□□□□ -0.39
SBDSP1-202ENST00000423945 H7BYZ3 331 aa12.6□□□□□ -0.39
SBDSP1-202ENST00000423945 HTN1P15515 57 aa12.6□□□□□ -0.39
SBDSP1-202ENST00000423945 HTN3P15516 51 aa12.6□□□□□ -0.39
SBDSP1-202ENST00000423945 SCGB1C1Q8TD33 95 aa12.6□□□□□ -0.39
SBDSP1-202ENST00000423945 RNF141Q8WVD5 230 aa12.6□□□□□ -0.39
SBDSP1-202ENST00000423945 IGKV2-40A0A087WW87 121 aaPredicted RBP12.59□□□□□ -0.39
SBDSP1-202ENST00000423945 TRAV12-3A0A0B4J271 114 aa12.59□□□□□ -0.39
SBDSP1-202ENST00000423945 IGKV2D-40P01614 121 aaPredicted RBP12.59□□□□□ -0.39
SBDSP1-202ENST00000423945 LEPP41159 167 aa12.59□□□□□ -0.39
SBDSP1-202ENST00000423945 FAM122CQ6P4D5 195 aa12.59□□□□□ -0.39
SBDSP1-202ENST00000423945 TMEM263Q8WUH6 116 aaKnown RBP12.59□□□□□ -0.39
SBDSP1-202ENST00000423945 C16orf74Q96GX8 76 aa12.59□□□□□ -0.39
SBDSP1-202ENST00000423945 KLLNB2CW77 178 aa12.58□□□□□ -0.4
SBDSP1-202ENST00000423945 OR7C2O60412 319 aa12.58□□□□□ -0.4
SBDSP1-202ENST00000423945 DEFB130BP0DP73 79 aa12.58□□□□□ -0.4
SBDSP1-202ENST00000423945 DEFB130AP0DP74 79 aa12.58□□□□□ -0.4
SBDSP1-202ENST00000423945 C9orf47Q6ZRZ4 202 aa12.58□□□□□ -0.4
SBDSP1-202ENST00000423945 FAM210BQ96KR6 192 aa12.58□□□□□ -0.4
SBDSP1-202ENST00000423945 LINC00477Q96M19 166 aa12.58□□□□□ -0.4
SBDSP1-202ENST00000423945 VGLL1Q99990 258 aa12.58□□□□□ -0.4
SBDSP1-202ENST00000423945 AAMDCQ9H7C9 122 aa12.58□□□□□ -0.4
SBDSP1-202ENST00000423945 RAB2AP61019 212 aa12.57□□□□□ -0.4
SBDSP1-202ENST00000423945 CD300CQ08708 224 aa12.57□□□□□ -0.4
SBDSP1-202ENST00000423945 PRR9Q5T870 116 aa12.57□□□□□ -0.4
SBDSP1-202ENST00000423945 TMEM88Q6PEY1 159 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms