RNA–Protein interactions for RNA: ENST00000423575.5

LINC00539-202, long intergenic non-protein coding RNA 539, humanhuman

TSL 3 BASIC

Gene LINC00539, Length 699 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-202ENST00000423575 TMEM167BQ9NRX6 74 aa8.93□□□□□ -0.98
LINC00539-202ENST00000423575 A0A0J9YX75 114 aa8.92□□□□□ -0.98
LINC00539-202ENST00000423575 H3BMM0 161 aa8.92□□□□□ -0.98
LINC00539-202ENST00000423575 H2AFB1P0C5Y9 115 aa8.92□□□□□ -0.98
LINC00539-202ENST00000423575 HLA-DRB4P13762 266 aa8.92□□□□□ -0.98
LINC00539-202ENST00000423575 RPL35AP18077 110 aaKnown RBP8.92□□□□□ -0.98
LINC00539-202ENST00000423575 TRPT1Q86TN4 253 aaKnown RBP8.92□□□□□ -0.98
LINC00539-202ENST00000423575 LYPD1Q8N2G4 141 aa8.92□□□□□ -0.98
LINC00539-202ENST00000423575 MRPL53Q96EL3 112 aaKnown RBP8.92□□□□□ -0.98
LINC00539-202ENST00000423575 SAV1Q9H4B6 383 aaPredicted RBP8.92□□□□□ -0.98
LINC00539-202ENST00000423575 AAMDCQ9H7C9 122 aa8.92□□□□□ -0.98
LINC00539-202ENST00000423575 OTORQ9NRC9 128 aa8.92□□□□□ -0.98
LINC00539-202ENST00000423575 CLEC5AQ9NY25 188 aa8.92□□□□□ -0.98
LINC00539-202ENST00000423575 HLA-DRB4X5D2U9 266 aa8.92□□□□□ -0.98
LINC00539-202ENST00000423575 LOC102724200A0A096LPH7 203 aaPredicted RBP8.91□□□□□ -0.98
LINC00539-202ENST00000423575 ZNF705EA8MWA4 302 aaPredicted RBP8.91□□□□□ -0.98
LINC00539-202ENST00000423575 ZNF705DP0CH99 300 aaPredicted RBP8.91□□□□□ -0.98
LINC00539-202ENST00000423575 ZNF705BP0CI00 300 aaPredicted RBP8.91□□□□□ -0.98
LINC00539-202ENST00000423575 EBLN2Q6P2I7 272 aa8.91□□□□□ -0.98
LINC00539-202ENST00000423575 STHQ8IWL8 128 aa8.91□□□□□ -0.98
LINC00539-202ENST00000423575 OR8A1Q8NGG7 326 aa8.91□□□□□ -0.98
LINC00539-202ENST00000423575 PRELID1Q9Y255 219 aa8.91□□□□□ -0.98
LINC00539-202ENST00000423575 TRAV1-1A0A0B4J248 108 aa8.9□□□□□ -0.98
LINC00539-202ENST00000423575 GGTLC3B5MD39 225 aa8.9□□□□□ -0.98
LINC00539-202ENST00000423575 CNN1P51911 297 aaKnown RBP8.9□□□□□ -0.98
LINC00539-202ENST00000423575 UBE2G2P60604 165 aa8.9□□□□□ -0.98
LINC00539-202ENST00000423575 CCL20P78556 96 aa8.9□□□□□ -0.98
LINC00539-202ENST00000423575 HIST1H1AQ02539 215 aaPredicted RBP8.9□□□□□ -0.98
LINC00539-202ENST00000423575 YTHDF2Q9Y5A9 579 aaKnown RBP8.9□□□□□ -0.98
LINC00539-202ENST00000423575 AGRNO00468 2067 aa8.89□□□□□ -0.99
LINC00539-202ENST00000423575 IGKV2-40A0A087WW87 121 aaPredicted RBP8.89□□□□□ -0.99
LINC00539-202ENST00000423575 A0A1W2PRE2 83 aa8.89□□□□□ -0.99
LINC00539-202ENST00000423575 PGPA6NDG6 321 aa8.89□□□□□ -0.99
LINC00539-202ENST00000423575 FAM74A7A6NL05 159 aa8.89□□□□□ -0.99
LINC00539-202ENST00000423575 A8MTW9 85 aa8.89□□□□□ -0.99
LINC00539-202ENST00000423575 IGKV2D-40P01614 121 aaPredicted RBP8.89□□□□□ -0.99
LINC00539-202ENST00000423575 IGKV3-20P01619 116 aa8.89□□□□□ -0.99
LINC00539-202ENST00000423575 HAGHQ16775 308 aa8.89□□□□□ -0.99
LINC00539-202ENST00000423575 TEX261Q6UWH6 196 aa8.89□□□□□ -0.99
LINC00539-202ENST00000423575 OR4B1Q8NGF8 309 aa8.89□□□□□ -0.99
LINC00539-202ENST00000423575 NPIPB6E9PJ23 425 aa8.88□□□□□ -0.99
LINC00539-202ENST00000423575 DUSP14O95147 198 aaKnown RBP8.88□□□□□ -0.99
LINC00539-202ENST00000423575 HBE1P02100 147 aa8.88□□□□□ -0.99
LINC00539-202ENST00000423575 GIG44P09565 113 aaPredicted RBP8.88□□□□□ -0.99
LINC00539-202ENST00000423575 GNG5P63218 68 aa8.88□□□□□ -0.99
LINC00539-202ENST00000423575 AMTNQ6UX39 209 aa8.88□□□□□ -0.99
LINC00539-202ENST00000423575 SBSPONQ8IVN8 264 aa8.88□□□□□ -0.99
LINC00539-202ENST00000423575 ZNF680Q8NEM1 530 aa8.88□□□□□ -0.99
LINC00539-202ENST00000423575 OR10J6PQ8NGY7 276 aa8.88□□□□□ -0.99
LINC00539-202ENST00000423575 CLUHP3Q96NS8 147 aa8.88□□□□□ -0.99
LINC00539-202ENST00000423575 ASCL2Q99929 193 aa8.88□□□□□ -0.99
LINC00539-202ENST00000423575 B9D2Q9BPU9 175 aa8.88□□□□□ -0.99
LINC00539-202ENST00000423575 HUWE1Q7Z6Z7 4374 aaKnown RBP8.87□□□□□ -0.99
LINC00539-202ENST00000423575 KIR2DL5BA0A0G2JN68 375 aa8.87□□□□□ -0.99
LINC00539-202ENST00000423575 KIR2DL5BA0A0G2JPC4 375 aa8.87□□□□□ -0.99
LINC00539-202ENST00000423575 PAGE4O60829 102 aa8.87□□□□□ -0.99
LINC00539-202ENST00000423575 SLC25A5P05141 298 aaKnown RBP8.87□□□□□ -0.99
LINC00539-202ENST00000423575 CSN1S1P47710 185 aa8.87□□□□□ -0.99
LINC00539-202ENST00000423575 APOC4P55056 127 aa8.87□□□□□ -0.99
LINC00539-202ENST00000423575 SUMO1P63165 101 aaKnown RBP8.87□□□□□ -0.99
LINC00539-202ENST00000423575 BLOC1S1P78537 153 aa8.87□□□□□ -0.99
LINC00539-202ENST00000423575 ERCC8Q13216 396 aa8.87□□□□□ -0.99
LINC00539-202ENST00000423575 KIR2DL5AQ8N109 375 aa8.87□□□□□ -0.99
LINC00539-202ENST00000423575 C5orf17Q8NAS9 161 aa8.87□□□□□ -0.99
LINC00539-202ENST00000423575 KIR2DL5BQ8NHK3 375 aa8.87□□□□□ -0.99
LINC00539-202ENST00000423575 CMTM2Q8TAZ6 248 aa8.87□□□□□ -0.99
LINC00539-202ENST00000423575 RXFP4Q8TDU9 374 aa8.87□□□□□ -0.99
LINC00539-202ENST00000423575 CSTL1Q9H114 145 aa8.87□□□□□ -0.99
LINC00539-202ENST00000423575 SLC35B3Q9H1N7 401 aa8.87□□□□□ -0.99
LINC00539-202ENST00000423575 RPH3ALQ9UNE2 315 aa8.87□□□□□ -0.99
LINC00539-202ENST00000423575 ARL2-SNX15V9GYD0 113 aa8.87□□□□□ -0.99
LINC00539-202ENST00000423575 DIRC3C9JPN6 131 aa8.86□□□□□ -0.99
LINC00539-202ENST00000423575 TEX46H3BTG2 121 aa8.86□□□□□ -0.99
LINC00539-202ENST00000423575 CA1P00915 261 aaPredicted RBP8.86□□□□□ -0.99
LINC00539-202ENST00000423575 IFNA7P01567 189 aa8.86□□□□□ -0.99
LINC00539-202ENST00000423575 ATP5G3P48201 142 aa8.86□□□□□ -0.99
LINC00539-202ENST00000423575 FXYD7P58549 80 aa8.86□□□□□ -0.99
LINC00539-202ENST00000423575 MORN3Q6PF18 240 aaPredicted RBP8.86□□□□□ -0.99
LINC00539-202ENST00000423575 GOLT1AQ6ZVE7 132 aa8.86□□□□□ -0.99
LINC00539-202ENST00000423575 PCNPQ8WW12 178 aaKnown RBP8.86□□□□□ -0.99
LINC00539-202ENST00000423575 VGLL1Q99990 258 aa8.86□□□□□ -0.99
LINC00539-202ENST00000423575 GNG13Q9P2W3 67 aa8.86□□□□□ -0.99
LINC00539-202ENST00000423575 NBEAL2Q6ZNJ1 2754 aa8.86□□□□□ -0.99
LINC00539-202ENST00000423575 M0R2Z0 102 aa8.85□□□□□ -0.99
LINC00539-202ENST00000423575 TCRAP04437 139 aa8.85□□□□□ -0.99
LINC00539-202ENST00000423575 CT45A10P0DMU9 189 aa8.85□□□□□ -0.99
LINC00539-202ENST00000423575 PPT1P50897 306 aa8.85□□□□□ -0.99
LINC00539-202ENST00000423575 CST9LP1Q5W188 147 aa8.85□□□□□ -0.99
LINC00539-202ENST00000423575 C9orf47Q6ZRZ4 202 aa8.85□□□□□ -0.99
LINC00539-202ENST00000423575 CCDC28AQ8IWP9 274 aa8.85□□□□□ -0.99
LINC00539-202ENST00000423575 ARL6IP6Q8N6S5 226 aa8.85□□□□□ -0.99
LINC00539-202ENST00000423575 Q8TAT8 98 aa8.85□□□□□ -0.99
LINC00539-202ENST00000423575 AGPAT4-IT1Q9H0P7 198 aa8.85□□□□□ -0.99
LINC00539-202ENST00000423575 RETNQ9HD89 108 aa8.85□□□□□ -0.99
LINC00539-202ENST00000423575 MANBALQ9NQG1 85 aa8.85□□□□□ -0.99
LINC00539-202ENST00000423575 EPDR1Q9UM22 224 aa8.85□□□□□ -0.99
LINC00539-202ENST00000423575 TENM3Q9P273 2699 aa8.84□□□□□ -0.99
LINC00539-202ENST00000423575 RBAKDNA6NC62 111 aa8.84□□□□□ -0.99
LINC00539-202ENST00000423575 UBE2CO00762 179 aa8.84□□□□□ -0.99
LINC00539-202ENST00000423575 NUTF2P61970 127 aaKnown RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms