RNA–Protein interactions for RNA: ENST00000423463.6

VPS13A-208, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,702 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-208ENST00000423463 HELTA6NFD8 242 aa1.82□□□□□ -2.12
VPS13A-208ENST00000423463 OR4C46A6NHA9 309 aa1.82□□□□□ -2.12
VPS13A-208ENST00000423463 SSSCA1O60232 199 aa1.82□□□□□ -2.12
VPS13A-208ENST00000423463 NUP62P37198 522 aaPredicted RBP1.82□□□□□ -2.12
VPS13A-208ENST00000423463 EIF2B2P49770 351 aaKnown RBP1.82□□□□□ -2.12
VPS13A-208ENST00000423463 CNN1P51911 297 aaKnown RBP1.82□□□□□ -2.12
VPS13A-208ENST00000423463 AP2S1P53680 142 aaPredicted RBP1.82□□□□□ -2.12
VPS13A-208ENST00000423463 SELENOTP62341 195 aa1.82□□□□□ -2.12
VPS13A-208ENST00000423463 ATP6V1FQ16864 119 aa1.82□□□□□ -2.12
VPS13A-208ENST00000423463 OR8G2PQ6IF36 304 aa1.82□□□□□ -2.12
VPS13A-208ENST00000423463 TCF24Q7RTU0 167 aa1.82□□□□□ -2.12
VPS13A-208ENST00000423463 Q8NBF4 154 aa1.82□□□□□ -2.12
VPS13A-208ENST00000423463 OR51G1Q8NGK1 321 aa1.82□□□□□ -2.12
VPS13A-208ENST00000423463 C11orf52Q96A22 123 aa1.82□□□□□ -2.12
VPS13A-208ENST00000423463 RNF2Q99496 336 aa1.82□□□□□ -2.12
VPS13A-208ENST00000423463 NMES1Q9C002 83 aa1.82□□□□□ -2.12
VPS13A-208ENST00000423463 C11orf1Q9H5F2 150 aa1.82□□□□□ -2.12
VPS13A-208ENST00000423463 TUBA4BQ9H853 241 aa1.82□□□□□ -2.12
VPS13A-208ENST00000423463 NPVFQ9HCQ7 196 aa1.82□□□□□ -2.12
VPS13A-208ENST00000423463 RPS10P5Q9NQ39 176 aa1.82□□□□□ -2.12
VPS13A-208ENST00000423463 RABAC1Q9UI14 185 aa1.82□□□□□ -2.12
VPS13A-208ENST00000423463 RCL1Q9Y2P8 373 aaKnown RBP1.82□□□□□ -2.12
VPS13A-208ENST00000423463 LSM5Q9Y4Y9 91 aaKnown RBP1.82□□□□□ -2.12
VPS13A-208ENST00000423463 IGHV3OR16-13A0A075B7E8 117 aa1.82□□□□□ -2.12
VPS13A-208ENST00000423463 IGHV3-49A0A0A0MS15 119 aa1.82□□□□□ -2.12
VPS13A-208ENST00000423463 IGHV3-74A0A0B4J1X5 117 aa1.82□□□□□ -2.12
VPS13A-208ENST00000423463 FAM24AA6NFZ4 105 aa1.82□□□□□ -2.12
VPS13A-208ENST00000423463 OR11H12B2RN74 326 aa1.82□□□□□ -2.12
VPS13A-208ENST00000423463 H3BP45 60 aa1.82□□□□□ -2.12
VPS13A-208ENST00000423463 DNASE2O00115 360 aaPredicted RBP1.82□□□□□ -2.12
VPS13A-208ENST00000423463 SOCS3O14543 225 aa1.82□□□□□ -2.12
VPS13A-208ENST00000423463 GOSR2O14653 212 aa1.82□□□□□ -2.12
VPS13A-208ENST00000423463 SSNA1O43805 119 aa1.82□□□□□ -2.12
VPS13A-208ENST00000423463 SIX6O95475 246 aa1.82□□□□□ -2.12
VPS13A-208ENST00000423463 IL4P05112 153 aa1.82□□□□□ -2.12
VPS13A-208ENST00000423463 CD7P09564 240 aa1.82□□□□□ -2.12
VPS13A-208ENST00000423463 METTL15P1P0C7V9 234 aa1.82□□□□□ -2.12
VPS13A-208ENST00000423463 S100A11P31949 105 aa1.82□□□□□ -2.12
VPS13A-208ENST00000423463 P2RY1P47900 373 aa1.82□□□□□ -2.12
VPS13A-208ENST00000423463 FHITP49789 147 aa1.82□□□□□ -2.12
VPS13A-208ENST00000423463 SULT1A1P50225 295 aa1.82□□□□□ -2.12
VPS13A-208ENST00000423463 BCAP31P51572 246 aa1.82□□□□□ -2.12
VPS13A-208ENST00000423463 CAV2P51636 162 aa1.82□□□□□ -2.12
VPS13A-208ENST00000423463 AKR1C1Q04828 323 aa1.82□□□□□ -2.12
VPS13A-208ENST00000423463 C1orf194Q5T5A4 169 aa1.82□□□□□ -2.12
VPS13A-208ENST00000423463 LINC00322Q6ZN03 302 aaPredicted RBP1.82□□□□□ -2.12
VPS13A-208ENST00000423463 S100A7AQ86SG5 101 aa1.82□□□□□ -2.12
VPS13A-208ENST00000423463 TMEM252Q8N6L7 170 aa1.82□□□□□ -2.12
VPS13A-208ENST00000423463 BPIFCQ8NFQ6 507 aa1.82□□□□□ -2.12
VPS13A-208ENST00000423463 SLC25A31Q9H0C2 315 aa1.82□□□□□ -2.12
VPS13A-208ENST00000423463 PARLQ9H300 379 aa1.82□□□□□ -2.12
VPS13A-208ENST00000423463 SORL1Q92673 2214 aa1.82□□□□□ -2.12
VPS13A-208ENST00000423463 IGKV1OR2-108A0A075B7D4 117 aa1.81□□□□□ -2.12
VPS13A-208ENST00000423463 SMCO3A2RU48 225 aa1.81□□□□□ -2.12
VPS13A-208ENST00000423463 CCNKO75909 580 aa1.81□□□□□ -2.12
VPS13A-208ENST00000423463 PLP1P60201 277 aa1.81□□□□□ -2.12
VPS13A-208ENST00000423463 S100A10P60903 97 aa1.81□□□□□ -2.12
VPS13A-208ENST00000423463 HBG1P69891 147 aa1.81□□□□□ -2.12
VPS13A-208ENST00000423463 HBG2P69892 147 aa1.81□□□□□ -2.12
VPS13A-208ENST00000423463 ZNF90Q03938 601 aa1.81□□□□□ -2.12
VPS13A-208ENST00000423463 RIGQ13278 110 aa1.81□□□□□ -2.12
VPS13A-208ENST00000423463 OR2F1Q13607 317 aa1.81□□□□□ -2.12
VPS13A-208ENST00000423463 RAB31Q13636 194 aa1.81□□□□□ -2.12
VPS13A-208ENST00000423463 USF2Q15853 346 aaPredicted RBP1.81□□□□□ -2.12
VPS13A-208ENST00000423463 RGS21Q2M5E4 152 aa1.81□□□□□ -2.12
VPS13A-208ENST00000423463 CYP2G1PQ6ZSU1 146 aa1.81□□□□□ -2.12
VPS13A-208ENST00000423463 ACOT7LQ6ZUV0 252 aa1.81□□□□□ -2.12
VPS13A-208ENST00000423463 STX12Q86Y82 276 aa1.81□□□□□ -2.12
VPS13A-208ENST00000423463 DEFB125Q8N687 156 aa1.81□□□□□ -2.12
VPS13A-208ENST00000423463 MED28Q9H204 178 aa1.81□□□□□ -2.12
VPS13A-208ENST00000423463 LYRM2Q9NU23 88 aaPredicted RBP1.81□□□□□ -2.12
VPS13A-208ENST00000423463 RNF24Q9Y225 148 aa1.81□□□□□ -2.12
VPS13A-208ENST00000423463 ALG5Q9Y673 324 aa1.81□□□□□ -2.12
VPS13A-208ENST00000423463 NOTCH1P46531 2555 aa1.81□□□□□ -2.12
VPS13A-208ENST00000423463 LOC102724200A0A096LPH7 203 aaPredicted RBP1.81□□□□□ -2.12
VPS13A-208ENST00000423463 IGHV3-38A0A0C4DH36 116 aa1.81□□□□□ -2.12
VPS13A-208ENST00000423463 IGHV3-66A0A0C4DH42 116 aa1.81□□□□□ -2.12
VPS13A-208ENST00000423463 KIR2DL5BA0A0G2JN68 375 aa1.81□□□□□ -2.12
VPS13A-208ENST00000423463 KIR2DL5BA0A0G2JPC4 375 aa1.81□□□□□ -2.12
VPS13A-208ENST00000423463 IGSF23A1L1A6 192 aa1.81□□□□□ -2.12
VPS13A-208ENST00000423463 RBMY1BA6NDE4 496 aaKnown RBP1.81□□□□□ -2.12
VPS13A-208ENST00000423463 RBMY1EA6NEQ0 496 aaKnown RBP1.81□□□□□ -2.12
VPS13A-208ENST00000423463 EPM2AB3EWF7 344 aa1.81□□□□□ -2.12
VPS13A-208ENST00000423463 K7EQG2 157 aa1.81□□□□□ -2.12
VPS13A-208ENST00000423463 MPDU1O75352 247 aa1.81□□□□□ -2.12
VPS13A-208ENST00000423463 HYPMO75409 117 aa1.81□□□□□ -2.12
VPS13A-208ENST00000423463 CST7O76096 145 aa1.81□□□□□ -2.12
VPS13A-208ENST00000423463 MPC2O95563 127 aa1.81□□□□□ -2.12
VPS13A-208ENST00000423463 RBMY1DP0C7P1 496 aaKnown RBP1.81□□□□□ -2.12
VPS13A-208ENST00000423463 PET100P0DJ07 73 aa1.81□□□□□ -2.12
VPS13A-208ENST00000423463 H2BFSP57053 126 aa1.81□□□□□ -2.12
VPS13A-208ENST00000423463 LYZP61626 148 aa1.81□□□□□ -2.12
VPS13A-208ENST00000423463 RRAS2P62070 204 aaPredicted RBP1.81□□□□□ -2.12
VPS13A-208ENST00000423463 SLC38A11Q08AI6 406 aa1.81□□□□□ -2.12
VPS13A-208ENST00000423463 OXA1LQ15070 435 aa1.81□□□□□ -2.12
VPS13A-208ENST00000423463 HAGHQ16775 308 aa1.81□□□□□ -2.12
VPS13A-208ENST00000423463 SAMD13Q5VXD3 122 aa1.81□□□□□ -2.12
VPS13A-208ENST00000423463 ZNF546Q86UE3 836 aa1.81□□□□□ -2.12
VPS13A-208ENST00000423463 SBSPONQ8IVN8 264 aa1.81□□□□□ -2.12
VPS13A-208ENST00000423463 KIR2DL5AQ8N109 375 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms