RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 TRAV12-2A0A075B6T6 113 aa15.69■□□□□ 0.1
TRAF4-204ENST00000422344 CRXO43186 299 aaPredicted RBP15.69■□□□□ 0.1
TRAF4-204ENST00000422344 GCSAMLQ5JQS6 135 aa15.69■□□□□ 0.1
TRAF4-204ENST00000422344 LGALS9CQ6DKI2 356 aa15.69■□□□□ 0.1
TRAF4-204ENST00000422344 SAT2Q96F10 170 aaPredicted RBP15.69■□□□□ 0.1
TRAF4-204ENST00000422344 ZNF586Q9NXT0 402 aa15.69■□□□□ 0.1
TRAF4-204ENST00000422344 TMEM14CQ9P0S9 112 aa15.69■□□□□ 0.1
TRAF4-204ENST00000422344 MBD2Q9UBB5 411 aa15.69■□□□□ 0.1
TRAF4-204ENST00000422344 HSPB11Q9Y547 144 aa15.69■□□□□ 0.1
TRAF4-204ENST00000422344 ZNF253O75346 499 aa15.68■□□□□ 0.1
TRAF4-204ENST00000422344 RPL12P30050 165 aaKnown RBP15.68■□□□□ 0.1
TRAF4-204ENST00000422344 FAM222AQ5U5X8 452 aa15.68■□□□□ 0.1
TRAF4-204ENST00000422344 DKK2Q9UBU2 259 aa15.68■□□□□ 0.1
TRAF4-204ENST00000422344 YTHDF2Q9Y5A9 579 aaKnown RBP15.68■□□□□ 0.1
TRAF4-204ENST00000422344 TIMM9Q9Y5J7 89 aa15.68■□□□□ 0.1
TRAF4-204ENST00000422344 IFNA5P01569 189 aa15.67■□□□□ 0.1
TRAF4-204ENST00000422344 HIST1H1EP10412 219 aaKnown RBP15.67■□□□□ 0.1
TRAF4-204ENST00000422344 CDKN1BP46527 198 aa15.67■□□□□ 0.1
TRAF4-204ENST00000422344 SCGB1C1Q8TD33 95 aa15.67■□□□□ 0.1
TRAF4-204ENST00000422344 NIPSNAP3BQ9BS92 247 aa15.67■□□□□ 0.1
TRAF4-204ENST00000422344 TRBV19A0A075B6N1 114 aa15.66■□□□□ 0.1
TRAF4-204ENST00000422344 IGHV4-4A0A075B6R2 117 aa15.66■□□□□ 0.1
TRAF4-204ENST00000422344 ZNF705GA8MUZ8 300 aaPredicted RBP15.66■□□□□ 0.1
TRAF4-204ENST00000422344 PRAC2D3DTV9 90 aa15.66■□□□□ 0.1
TRAF4-204ENST00000422344 TSPOP30536 169 aa15.66■□□□□ 0.1
TRAF4-204ENST00000422344 TMEM256Q8N2U0 113 aa15.66■□□□□ 0.1
TRAF4-204ENST00000422344 LINC01587Q99440 93 aa15.66■□□□□ 0.1
TRAF4-204ENST00000422344 SMIM3Q9BZL3 60 aa15.66■□□□□ 0.1
TRAF4-204ENST00000422344 APLNQ9ULZ1 77 aa15.66■□□□□ 0.1
TRAF4-204ENST00000422344 PYYP10082 97 aa15.65■□□□□ 0.1
TRAF4-204ENST00000422344 BLNKQ8WV28 456 aa15.65■□□□□ 0.1
TRAF4-204ENST00000422344 SLC25A2Q9BXI2 301 aa15.65■□□□□ 0.1
TRAF4-204ENST00000422344 MRPL32Q9BYC8 188 aaKnown RBP15.65■□□□□ 0.1
TRAF4-204ENST00000422344 MED28Q9H204 178 aa15.65■□□□□ 0.1
TRAF4-204ENST00000422344 PDE6HQ13956 83 aa15.64■□□□□ 0.09
TRAF4-204ENST00000422344 MIR17HGQ75NE6 70 aa15.64■□□□□ 0.09
TRAF4-204ENST00000422344 MRPL53Q96EL3 112 aaKnown RBP15.64■□□□□ 0.09
TRAF4-204ENST00000422344 AAMDCQ9H7C9 122 aa15.64■□□□□ 0.09
TRAF4-204ENST00000422344 PRELID1Q9Y255 219 aa15.63■□□□□ 0.09
TRAF4-204ENST00000422344 HECTD4Q9Y4D8 3996 aa15.62■□□□□ 0.09
TRAF4-204ENST00000422344 HTN1P15515 57 aa15.62■□□□□ 0.09
TRAF4-204ENST00000422344 LEPP41159 167 aa15.62■□□□□ 0.09
TRAF4-204ENST00000422344 TAS2R60P59551 318 aa15.62■□□□□ 0.09
TRAF4-204ENST00000422344 DAD1P61803 113 aa15.62■□□□□ 0.09
TRAF4-204ENST00000422344 OXA1LQ15070 435 aa15.62■□□□□ 0.09
TRAF4-204ENST00000422344 FFAR4Q5NUL3 377 aa15.62■□□□□ 0.09
TRAF4-204ENST00000422344 NDUFAF3Q9BU61 184 aa15.62■□□□□ 0.09
TRAF4-204ENST00000422344 OR51M1Q9H341 326 aa15.62■□□□□ 0.09
TRAF4-204ENST00000422344 FUT9Q9Y231 359 aa15.62■□□□□ 0.09
TRAF4-204ENST00000422344 NPIPB6E9PJ23 425 aa15.61■□□□□ 0.09
TRAF4-204ENST00000422344 NDUFB4O95168 129 aa15.61■□□□□ 0.09
TRAF4-204ENST00000422344 PRM2P04554 102 aa15.61■□□□□ 0.09
TRAF4-204ENST00000422344 HTN3P15516 51 aa15.61■□□□□ 0.09
TRAF4-204ENST00000422344 FAM167A-AS1Q96KT0 104 aa15.61■□□□□ 0.09
TRAF4-204ENST00000422344 C20orf144Q9BQM9 153 aa15.61■□□□□ 0.09
TRAF4-204ENST00000422344 PAXXQ9BUH6 204 aa15.61■□□□□ 0.09
TRAF4-204ENST00000422344 PARD6GQ9BYG4 376 aaPredicted RBP15.61■□□□□ 0.09
TRAF4-204ENST00000422344 PLA2G2EQ9NZK7 142 aa15.61■□□□□ 0.09
TRAF4-204ENST00000422344 LYRM9A8MSI8 78 aa15.6■□□□□ 0.09
TRAF4-204ENST00000422344 H7BYZ3 331 aa15.6■□□□□ 0.09
TRAF4-204ENST00000422344 M0R3E3 92 aa15.6■□□□□ 0.09
TRAF4-204ENST00000422344 OR7C2O60412 319 aa15.6■□□□□ 0.09
TRAF4-204ENST00000422344 FCN2Q15485 313 aa15.6■□□□□ 0.09
TRAF4-204ENST00000422344 ODF3Q96PU9 254 aa15.6■□□□□ 0.09
TRAF4-204ENST00000422344 J3KRW8 73 aa15.59■□□□□ 0.09
TRAF4-204ENST00000422344 NBEAP1P0C6P0 100 aa15.59■□□□□ 0.09
TRAF4-204ENST00000422344 EXOC3-AS1Q8N2X6 119 aa15.59■□□□□ 0.09
TRAF4-204ENST00000422344 C16orf74Q96GX8 76 aa15.59■□□□□ 0.09
TRAF4-204ENST00000422344 OR10J4P0C629 311 aa15.58■□□□□ 0.08
TRAF4-204ENST00000422344 CT45A10P0DMU9 189 aa15.58■□□□□ 0.08
TRAF4-204ENST00000422344 AZU1P20160 251 aa15.58■□□□□ 0.08
TRAF4-204ENST00000422344 ICAM4Q14773 271 aa15.58■□□□□ 0.08
TRAF4-204ENST00000422344 GFI1BQ5VTD9 330 aa15.58■□□□□ 0.08
TRAF4-204ENST00000422344 RNF141Q8WVD5 230 aa15.58■□□□□ 0.08
TRAF4-204ENST00000422344 VPS13DQ5THJ4 4388 aa15.58■□□□□ 0.08
TRAF4-204ENST00000422344 PCLOQ9Y6V0 5065 aa15.57■□□□□ 0.08
TRAF4-204ENST00000422344 TAS2R45P59539 299 aa15.57■□□□□ 0.08
TRAF4-204ENST00000422344 KIR3DS1Q14943 382 aa15.57■□□□□ 0.08
TRAF4-204ENST00000422344 FAM122CQ6P4D5 195 aa15.57■□□□□ 0.08
TRAF4-204ENST00000422344 CCDC28AQ8IWP9 274 aa15.57■□□□□ 0.08
TRAF4-204ENST00000422344 FAM210BQ96KR6 192 aa15.57■□□□□ 0.08
TRAF4-204ENST00000422344 WFDC1Q9HC57 220 aa15.57■□□□□ 0.08
TRAF4-204ENST00000422344 DEFB130BP0DP73 79 aa15.56■□□□□ 0.08
TRAF4-204ENST00000422344 DEFB130AP0DP74 79 aa15.56■□□□□ 0.08
TRAF4-204ENST00000422344 UBE2L3P68036 154 aaKnown RBP15.56■□□□□ 0.08
TRAF4-204ENST00000422344 ERCC8Q13216 396 aa15.56■□□□□ 0.08
TRAF4-204ENST00000422344 KHDC3LQ587J8 217 aa15.56■□□□□ 0.08
TRAF4-204ENST00000422344 ZNF493Q6ZR52 646 aa15.56■□□□□ 0.08
TRAF4-204ENST00000422344 FXYD5Q96DB9 178 aa15.56■□□□□ 0.08
TRAF4-204ENST00000422344 LINC00477Q96M19 166 aa15.56■□□□□ 0.08
TRAF4-204ENST00000422344 RGS21Q2M5E4 152 aa15.55■□□□□ 0.08
TRAF4-204ENST00000422344 ACOT6Q3I5F7 207 aaPredicted RBP15.55■□□□□ 0.08
TRAF4-204ENST00000422344 TMEM263Q8WUH6 116 aaKnown RBP15.55■□□□□ 0.08
TRAF4-204ENST00000422344 ASB13Q8WXK3 278 aa15.55■□□□□ 0.08
TRAF4-204ENST00000422344 TRAV12-3A0A0B4J271 114 aa15.54■□□□□ 0.08
TRAF4-204ENST00000422344 GIPP09681 153 aaPredicted RBP15.54■□□□□ 0.08
TRAF4-204ENST00000422344 P0DMU3 169 aa15.54■□□□□ 0.08
TRAF4-204ENST00000422344 FAM231AP0DMU4 169 aa15.54■□□□□ 0.08
TRAF4-204ENST00000422344 FAM231CP0DMU5 169 aa15.54■□□□□ 0.08
TRAF4-204ENST00000422344 ZNF266Q14584 549 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms