RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 LINC01549A6NIU2 74 aa8.56□□□□□ -1.04
PTCH1-206ENST00000421141 DNLZQ5SXM8 178 aa8.56□□□□□ -1.04
PTCH1-206ENST00000421141 C8orf86Q6ZUL3 223 aa8.56□□□□□ -1.04
PTCH1-206ENST00000421141 MDKP21741 143 aaPredicted RBP8.56□□□□□ -1.04
PTCH1-206ENST00000421141 PET117Q6UWS5 81 aa8.56□□□□□ -1.04
PTCH1-206ENST00000421141 SRP19P09132 144 aaKnown RBP8.56□□□□□ -1.04
PTCH1-206ENST00000421141 LGALS1P09382 135 aaKnown RBP8.56□□□□□ -1.04
PTCH1-206ENST00000421141 RPLP1P05386 114 aaKnown RBP8.56□□□□□ -1.04
PTCH1-206ENST00000421141 IGHV7-4-1A0A0J9YVY3 117 aa8.56□□□□□ -1.04
PTCH1-206ENST00000421141 STAG3L2P0CL84 134 aa8.56□□□□□ -1.04
PTCH1-206ENST00000421141 STAG3L3P0CL85 134 aa8.56□□□□□ -1.04
PTCH1-206ENST00000421141 FOXA3P55318 350 aaPredicted RBP8.56□□□□□ -1.04
PTCH1-206ENST00000421141 FAM90A2PQ658T7 463 aa8.56□□□□□ -1.04
PTCH1-206ENST00000421141 ZNF134P52741 427 aa8.55□□□□□ -1.04
PTCH1-206ENST00000421141 SPRNQ5BIV9 151 aa8.55□□□□□ -1.04
PTCH1-206ENST00000421141 DNAL4O96015 105 aa8.55□□□□□ -1.04
PTCH1-206ENST00000421141 CD28P10747 220 aa8.55□□□□□ -1.04
PTCH1-206ENST00000421141 OR5A1Q8NGJ0 315 aa8.55□□□□□ -1.04
PTCH1-206ENST00000421141 SPINK13Q1W4C9 94 aa8.55□□□□□ -1.04
PTCH1-206ENST00000421141 NUDT10Q8NFP7 164 aa8.55□□□□□ -1.04
PTCH1-206ENST00000421141 AGMATQ9BSE5 352 aa8.55□□□□□ -1.04
PTCH1-206ENST00000421141 CDKN1BP46527 198 aa8.55□□□□□ -1.04
PTCH1-206ENST00000421141 TMEM86BQ8N661 226 aa8.55□□□□□ -1.04
PTCH1-206ENST00000421141 ATP6V0BQ99437 205 aa8.55□□□□□ -1.04
PTCH1-206ENST00000421141 JKAMPQ9P055 326 aa8.55□□□□□ -1.04
PTCH1-206ENST00000421141 HOXA5P20719 270 aa8.55□□□□□ -1.04
PTCH1-206ENST00000421141 NPBQ8NG41 125 aa8.54□□□□□ -1.04
PTCH1-206ENST00000421141 IMMP2LQ96T52 175 aa8.54□□□□□ -1.04
PTCH1-206ENST00000421141 PARD6GQ9BYG4 376 aaPredicted RBP8.54□□□□□ -1.04
PTCH1-206ENST00000421141 IGKV3D-20A0A0C4DH25 116 aa8.54□□□□□ -1.04
PTCH1-206ENST00000421141 TCRAP04437 139 aa8.54□□□□□ -1.04
PTCH1-206ENST00000421141 EVI2AP22794 236 aa8.54□□□□□ -1.04
PTCH1-206ENST00000421141 ATP5L2Q7Z4Y8 100 aa8.54□□□□□ -1.04
PTCH1-206ENST00000421141 TSKUQ8WUA8 353 aa8.54□□□□□ -1.04
PTCH1-206ENST00000421141 CD5LO43866 347 aa8.54□□□□□ -1.04
PTCH1-206ENST00000421141 MBD3L1Q8WWY6 194 aa8.54□□□□□ -1.04
PTCH1-206ENST00000421141 CHD8Q9HCK8 2581 aa8.54□□□□□ -1.04
PTCH1-206ENST00000421141 TMEM75Q8N9X5 138 aa8.54□□□□□ -1.04
PTCH1-206ENST00000421141 Q8TAT8 98 aa8.54□□□□□ -1.04
PTCH1-206ENST00000421141 DIAPH2-AS1Q14236 149 aa8.54□□□□□ -1.04
PTCH1-206ENST00000421141 DEFB136Q30KP8 78 aa8.54□□□□□ -1.04
PTCH1-206ENST00000421141 TPSG1Q9NRR2 321 aa8.54□□□□□ -1.04
PTCH1-206ENST00000421141 TCF23Q7RTU1 214 aa8.53□□□□□ -1.04
PTCH1-206ENST00000421141 RNF182Q8N6D2 247 aa8.53□□□□□ -1.04
PTCH1-206ENST00000421141 A0A087WWC5 75 aa8.53□□□□□ -1.04
PTCH1-206ENST00000421141 CLPSL1A2RUU4 121 aa8.53□□□□□ -1.04
PTCH1-206ENST00000421141 OR11H2Q8NH07 326 aa8.53□□□□□ -1.04
PTCH1-206ENST00000421141 WFDC1Q9HC57 220 aa8.53□□□□□ -1.04
PTCH1-206ENST00000421141 COL4A2P08572 1712 aa8.53□□□□□ -1.04
PTCH1-206ENST00000421141 H0YIZ8 118 aa8.53□□□□□ -1.04
PTCH1-206ENST00000421141 C19orf84I3L1E1 186 aa8.53□□□□□ -1.04
PTCH1-206ENST00000421141 SH2D1AO60880 128 aa8.53□□□□□ -1.04
PTCH1-206ENST00000421141 TMEM95Q3KNT9 176 aa8.53□□□□□ -1.04
PTCH1-206ENST00000421141 C5orf56Q8N8D9 126 aa8.53□□□□□ -1.04
PTCH1-206ENST00000421141 ERCC8Q13216 396 aa8.53□□□□□ -1.04
PTCH1-206ENST00000421141 RPL23P62829 140 aaKnown RBP8.53□□□□□ -1.04
PTCH1-206ENST00000421141 TLN2Q9Y4G6 2542 aa8.53□□□□□ -1.04
PTCH1-206ENST00000421141 AZU1P20160 251 aa8.53□□□□□ -1.04
PTCH1-206ENST00000421141 ZNF876PQ49A33 203 aa8.52□□□□□ -1.05
PTCH1-206ENST00000421141 SPATA45Q537H7 98 aa8.52□□□□□ -1.05
PTCH1-206ENST00000421141 GP9P14770 177 aa8.52□□□□□ -1.05
PTCH1-206ENST00000421141 LAGE3Q14657 143 aa8.52□□□□□ -1.05
PTCH1-206ENST00000421141 PUSL1Q8N0Z8 303 aaKnown RBP8.52□□□□□ -1.05
PTCH1-206ENST00000421141 FOXC2Q99958 501 aa8.52□□□□□ -1.05
PTCH1-206ENST00000421141 TEX48A0A1B0GUV7 120 aa8.52□□□□□ -1.05
PTCH1-206ENST00000421141 RHODO00212 210 aa8.52□□□□□ -1.05
PTCH1-206ENST00000421141 NDUFA3O95167 84 aa8.52□□□□□ -1.05
PTCH1-206ENST00000421141 APOMO95445 188 aa8.52□□□□□ -1.05
PTCH1-206ENST00000421141 Q8NFD4 153 aa8.52□□□□□ -1.05
PTCH1-206ENST00000421141 RBMY1BA6NDE4 496 aaKnown RBP8.52□□□□□ -1.05
PTCH1-206ENST00000421141 RBMY1EA6NEQ0 496 aaKnown RBP8.52□□□□□ -1.05
PTCH1-206ENST00000421141 SLC25A20O43772 301 aa8.52□□□□□ -1.05
PTCH1-206ENST00000421141 RBMY1DP0C7P1 496 aaKnown RBP8.52□□□□□ -1.05
PTCH1-206ENST00000421141 RBMY1A1P0DJD3 496 aaKnown RBP8.52□□□□□ -1.05
PTCH1-206ENST00000421141 RBMY1CP0DJD4 496 aa8.52□□□□□ -1.05
PTCH1-206ENST00000421141 SLAQ13239 276 aa8.52□□□□□ -1.05
PTCH1-206ENST00000421141 TRAV1-1A0A0B4J248 108 aa8.52□□□□□ -1.05
PTCH1-206ENST00000421141 DNAJC9-AS1A6NH13 148 aa8.52□□□□□ -1.05
PTCH1-206ENST00000421141 IGHV4-31P0DP07 118 aa8.52□□□□□ -1.05
PTCH1-206ENST00000421141 ZFP36P26651 326 aaKnown RBP8.52□□□□□ -1.05
PTCH1-206ENST00000421141 MLANAQ16655 118 aa8.51□□□□□ -1.05
PTCH1-206ENST00000421141 Q6ZRM9 215 aa8.51□□□□□ -1.05
PTCH1-206ENST00000421141 PMCHL2Q9BQD1 86 aa8.51□□□□□ -1.05
PTCH1-206ENST00000421141 A0A0G2JRQ6 117 aa8.51□□□□□ -1.05
PTCH1-206ENST00000421141 MYO9AB2RTY4 2548 aa8.51□□□□□ -1.05
PTCH1-206ENST00000421141 GHRHP01286 108 aa8.51□□□□□ -1.05
PTCH1-206ENST00000421141 GZMBP10144 247 aa8.51□□□□□ -1.05
PTCH1-206ENST00000421141 PRB4P10163 310 aaPredicted RBP8.51□□□□□ -1.05
PTCH1-206ENST00000421141 OCC1Q8TAD7 63 aa8.51□□□□□ -1.05
PTCH1-206ENST00000421141 C4orf3Q8WVX3 66 aa8.51□□□□□ -1.05
PTCH1-206ENST00000421141 SMIM12Q96EX1 92 aa8.51□□□□□ -1.05
PTCH1-206ENST00000421141 RSPO3Q9BXY4 272 aaPredicted RBP8.51□□□□□ -1.05
PTCH1-206ENST00000421141 SS18Q15532 418 aa8.51□□□□□ -1.05
PTCH1-206ENST00000421141 RMI2Q96E14 147 aa8.51□□□□□ -1.05
PTCH1-206ENST00000421141 NUDT11Q96G61 164 aa8.51□□□□□ -1.05
PTCH1-206ENST00000421141 MS4A6AQ9H2W1 248 aa8.51□□□□□ -1.05
PTCH1-206ENST00000421141 A8MWV9 139 aa8.51□□□□□ -1.05
PTCH1-206ENST00000421141 IGFL4Q6B9Z1 124 aa8.51□□□□□ -1.05
PTCH1-206ENST00000421141 VCYO14598 125 aa8.51□□□□□ -1.05
PTCH1-206ENST00000421141 CFHR3Q02985 330 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 144.4 ms