RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 C1orf147Q96MC9 270 aaPredicted RBP9.95□□□□□ -0.82
CLCN4-203ENST00000421085 E9PQ18 207 aa9.95□□□□□ -0.82
CLCN4-203ENST00000421085 PTPRDP23468 1912 aa9.95□□□□□ -0.82
CLCN4-203ENST00000421085 DKK1O94907 266 aa9.95□□□□□ -0.82
CLCN4-203ENST00000421085 Q0VFX4 171 aa9.95□□□□□ -0.82
CLCN4-203ENST00000421085 OR11H6Q8NGC7 330 aa9.95□□□□□ -0.82
CLCN4-203ENST00000421085 PRO1854Q9UHT4 67 aa9.95□□□□□ -0.82
CLCN4-203ENST00000421085 CCL25O15444 150 aa9.95□□□□□ -0.82
CLCN4-203ENST00000421085 LYPD2Q6UXB3 125 aa9.95□□□□□ -0.82
CLCN4-203ENST00000421085 SRSF8Q9BRL6 282 aaKnown RBP9.95□□□□□ -0.82
CLCN4-203ENST00000421085 RHPN1-AS1Q9BWJ2 59 aa9.95□□□□□ -0.82
CLCN4-203ENST00000421085 TNS1Q9HBL0 1735 aaKnown RBP9.95□□□□□ -0.82
CLCN4-203ENST00000421085 TRBV19A0A075B6N1 114 aa9.94□□□□□ -0.82
CLCN4-203ENST00000421085 OOSP1A8MZH6 123 aa9.94□□□□□ -0.82
CLCN4-203ENST00000421085 LTBRP36941 435 aa9.94□□□□□ -0.82
CLCN4-203ENST00000421085 B3GALT5-AS1P59052 145 aa9.94□□□□□ -0.82
CLCN4-203ENST00000421085 MRAPQ8TCY5 172 aa9.94□□□□□ -0.82
CLCN4-203ENST00000421085 NDUFA4L2Q9NRX3 87 aa9.94□□□□□ -0.82
CLCN4-203ENST00000421085 CEACAM8P31997 349 aaPredicted RBP9.94□□□□□ -0.82
CLCN4-203ENST00000421085 SS18L2Q9UHA2 77 aa9.94□□□□□ -0.82
CLCN4-203ENST00000421085 CSRP2Q16527 193 aa9.94□□□□□ -0.82
CLCN4-203ENST00000421085 SIVA1O15304 175 aa9.93□□□□□ -0.82
CLCN4-203ENST00000421085 NPYP01303 97 aa9.93□□□□□ -0.82
CLCN4-203ENST00000421085 DKK2Q9UBU2 259 aa9.93□□□□□ -0.82
CLCN4-203ENST00000421085 KIAA2026Q5HYC2 2103 aa9.93□□□□□ -0.82
CLCN4-203ENST00000421085 ABCA7Q8IZY2 2146 aa9.93□□□□□ -0.82
CLCN4-203ENST00000421085 UTF1Q5T230 341 aa9.93□□□□□ -0.82
CLCN4-203ENST00000421085 UBE2E2Q96LR5 201 aa9.93□□□□□ -0.82
CLCN4-203ENST00000421085 K7EN84 100 aa9.93□□□□□ -0.82
CLCN4-203ENST00000421085 TAL2Q16559 108 aa9.93□□□□□ -0.82
CLCN4-203ENST00000421085 KIR2DL5BA0A0G2JN68 375 aa9.93□□□□□ -0.82
CLCN4-203ENST00000421085 KIR2DL5BA0A0G2JPC4 375 aa9.93□□□□□ -0.82
CLCN4-203ENST00000421085 NTN3O00634 580 aaPredicted RBP9.93□□□□□ -0.82
CLCN4-203ENST00000421085 C12orf74Q32Q52 190 aa9.93□□□□□ -0.82
CLCN4-203ENST00000421085 KIR2DL5AQ8N109 375 aa9.93□□□□□ -0.82
CLCN4-203ENST00000421085 HLA-DRB4P13762 266 aa9.93□□□□□ -0.82
CLCN4-203ENST00000421085 CARD19Q96LW7 228 aa9.93□□□□□ -0.82
CLCN4-203ENST00000421085 KLF2Q9Y5W3 355 aaPredicted RBP9.93□□□□□ -0.82
CLCN4-203ENST00000421085 HLA-DRB4X5D2U9 266 aa9.93□□□□□ -0.82
CLCN4-203ENST00000421085 FAM223BA6NKX1 122 aa9.92□□□□□ -0.82
CLCN4-203ENST00000421085 UNQ6494/PRO21346Q6UXR6 183 aa9.92□□□□□ -0.82
CLCN4-203ENST00000421085 FAM223AQ8IWN6 122 aa9.92□□□□□ -0.82
CLCN4-203ENST00000421085 MED12Q93074 2177 aa9.92□□□□□ -0.82
CLCN4-203ENST00000421085 GAGE12JA6NER3 117 aa9.92□□□□□ -0.82
CLCN4-203ENST00000421085 GAGE7O76087 117 aa9.92□□□□□ -0.82
CLCN4-203ENST00000421085 GAGE12FP0CL80 117 aa9.92□□□□□ -0.82
CLCN4-203ENST00000421085 GAGE12GP0CL81 117 aa9.92□□□□□ -0.82
CLCN4-203ENST00000421085 GAGE12IP0CL82 117 aa9.92□□□□□ -0.82
CLCN4-203ENST00000421085 GAGE4Q13068 117 aa9.92□□□□□ -0.82
CLCN4-203ENST00000421085 DTX1Q86Y01 620 aa9.92□□□□□ -0.82
CLCN4-203ENST00000421085 B5MCH6 92 aa9.92□□□□□ -0.82
CLCN4-203ENST00000421085 BRD3OSQ6XYD6 125 aa9.92□□□□□ -0.82
CLCN4-203ENST00000421085 KNCNA6PVL3 124 aa9.92□□□□□ -0.82
CLCN4-203ENST00000421085 NDUFS7O75251 213 aa9.92□□□□□ -0.82
CLCN4-203ENST00000421085 NSUN5P1Q3KNT7 163 aa9.92□□□□□ -0.82
CLCN4-203ENST00000421085 I3L3M4 83 aa9.91□□□□□ -0.82
CLCN4-203ENST00000421085 M0R1W7 72 aa9.91□□□□□ -0.82
CLCN4-203ENST00000421085 LYPD6BQ8NI32 183 aa9.91□□□□□ -0.82
CLCN4-203ENST00000421085 USMG5Q96IX5 58 aa9.91□□□□□ -0.82
CLCN4-203ENST00000421085 TET1Q8NFU7 2136 aa9.91□□□□□ -0.82
CLCN4-203ENST00000421085 F8WEM9 126 aa9.91□□□□□ -0.82
CLCN4-203ENST00000421085 SAP30O75446 220 aa9.91□□□□□ -0.82
CLCN4-203ENST00000421085 RPL35AP18077 110 aaKnown RBP9.91□□□□□ -0.82
CLCN4-203ENST00000421085 EFNA4P52798 201 aa9.91□□□□□ -0.82
CLCN4-203ENST00000421085 SS18Q15532 418 aa9.91□□□□□ -0.82
CLCN4-203ENST00000421085 TMEM105Q8N8V8 129 aa9.91□□□□□ -0.82
CLCN4-203ENST00000421085 ZC2HC1AQ96GY0 325 aa9.91□□□□□ -0.82
CLCN4-203ENST00000421085 PHF3Q92576 2039 aaKnown RBP9.91□□□□□ -0.82
CLCN4-203ENST00000421085 H3BUX3 64 aa9.91□□□□□ -0.82
CLCN4-203ENST00000421085 CDK2AP2O75956 126 aa9.91□□□□□ -0.82
CLCN4-203ENST00000421085 SPANXDQ9BXN6 97 aa9.91□□□□□ -0.82
CLCN4-203ENST00000421085 AKAP6Q13023 2319 aa9.91□□□□□ -0.82
CLCN4-203ENST00000421085 CRIPAKQ8N1N5 446 aa9.91□□□□□ -0.82
CLCN4-203ENST00000421085 UBL5Q9BZL1 73 aa9.91□□□□□ -0.82
CLCN4-203ENST00000421085 F8VRH5 84 aa9.91□□□□□ -0.82
CLCN4-203ENST00000421085 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.91□□□□□ -0.82
CLCN4-203ENST00000421085 C15orf53Q8NAA6 179 aa9.91□□□□□ -0.82
CLCN4-203ENST00000421085 TMEM126AQ9H061 195 aa9.91□□□□□ -0.82
CLCN4-203ENST00000421085 C11orf52Q96A22 123 aa9.9□□□□□ -0.82
CLCN4-203ENST00000421085 PRR25Q96S07 402 aa9.9□□□□□ -0.82
CLCN4-203ENST00000421085 MSRB2Q9Y3D2 182 aa9.9□□□□□ -0.82
CLCN4-203ENST00000421085 FANCMQ8IYD8 2048 aa9.9□□□□□ -0.82
CLCN4-203ENST00000421085 CEP250Q9BV73 2442 aa9.9□□□□□ -0.82
CLCN4-203ENST00000421085 SDHAF1A6NFY7 115 aa9.9□□□□□ -0.82
CLCN4-203ENST00000421085 HLA-DMBP28068 263 aa9.9□□□□□ -0.82
CLCN4-203ENST00000421085 PFN2P35080 140 aa9.9□□□□□ -0.82
CLCN4-203ENST00000421085 HAMPP81172 84 aa9.9□□□□□ -0.82
CLCN4-203ENST00000421085 DEFB125Q8N687 156 aa9.9□□□□□ -0.82
CLCN4-203ENST00000421085 C17orf82Q86X59 251 aaPredicted RBP9.9□□□□□ -0.82
CLCN4-203ENST00000421085 PIP4P2Q8N4L2 257 aa9.9□□□□□ -0.82
CLCN4-203ENST00000421085 ANKRD29Q8N6D5 301 aa9.9□□□□□ -0.82
CLCN4-203ENST00000421085 NTN5Q8WTR8 489 aaPredicted RBP9.9□□□□□ -0.82
CLCN4-203ENST00000421085 NDUFA12Q9UI09 145 aa9.9□□□□□ -0.82
CLCN4-203ENST00000421085 OVOL3O00110 214 aa9.9□□□□□ -0.83
CLCN4-203ENST00000421085 DAZ1Q9NQZ3 744 aaKnown RBP9.9□□□□□ -0.83
CLCN4-203ENST00000421085 LMO1P25800 156 aa9.89□□□□□ -0.83
CLCN4-203ENST00000421085 VOPP1Q96AW1 172 aa9.89□□□□□ -0.83
CLCN4-203ENST00000421085 GAGE5Q13069 117 aa9.89□□□□□ -0.83
CLCN4-203ENST00000421085 GAGE6Q13070 117 aa9.89□□□□□ -0.83
CLCN4-203ENST00000421085 DOCK9Q9BZ29 2069 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms