RNA–Protein interactions for RNA: ENST00000420995.6

TRIM13-204, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-204ENST00000420995 FAM104BQ5XKR9 115 aa12.45□□□□□ -0.42
TRIM13-204ENST00000420995 AAMDCQ9H7C9 122 aa12.45□□□□□ -0.42
TRIM13-204ENST00000420995 WI2-2373I1.2A0A1W2PRP0 233 aa12.44□□□□□ -0.42
TRIM13-204ENST00000420995 TMEM97Q5BJF2 176 aa12.44□□□□□ -0.42
TRIM13-204ENST00000420995 ORMDL3Q8N138 153 aa12.44□□□□□ -0.42
TRIM13-204ENST00000420995 Q8TAT8 98 aa12.44□□□□□ -0.42
TRIM13-204ENST00000420995 RABAC1Q9UI14 185 aa12.44□□□□□ -0.42
TRIM13-204ENST00000420995 ABCA4P78363 2273 aa12.44□□□□□ -0.42
TRIM13-204ENST00000420995 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.44□□□□□ -0.42
TRIM13-204ENST00000420995 NBR2O15453 112 aa12.44□□□□□ -0.42
TRIM13-204ENST00000420995 IGHV3-23P01764 117 aa12.44□□□□□ -0.42
TRIM13-204ENST00000420995 MRPL51Q4U2R6 128 aaKnown RBP12.44□□□□□ -0.42
TRIM13-204ENST00000420995 Q8NA96 180 aa12.44□□□□□ -0.42
TRIM13-204ENST00000420995 PEF1Q9UBV8 284 aaKnown RBP12.44□□□□□ -0.42
TRIM13-204ENST00000420995 ARHGAP32A7KAX9 2087 aa12.44□□□□□ -0.42
TRIM13-204ENST00000420995 U3KQK5 164 aa12.43□□□□□ -0.42
TRIM13-204ENST00000420995 GAGE12BA1L429 117 aa12.43□□□□□ -0.42
TRIM13-204ENST00000420995 IGFL4Q6B9Z1 124 aa12.43□□□□□ -0.42
TRIM13-204ENST00000420995 WFDC3Q8IUB2 231 aa12.43□□□□□ -0.42
TRIM13-204ENST00000420995 SRSF8Q9BRL6 282 aaKnown RBP12.43□□□□□ -0.42
TRIM13-204ENST00000420995 TLN1Q9Y490 2541 aaKnown RBP12.43□□□□□ -0.42
TRIM13-204ENST00000420995 B9A039 149 aa12.42□□□□□ -0.42
TRIM13-204ENST00000420995 LY6HO94772 140 aa12.42□□□□□ -0.42
TRIM13-204ENST00000420995 RNF5Q99942 180 aa12.42□□□□□ -0.42
TRIM13-204ENST00000420995 NAA38Q9BRA0 125 aaKnown RBP12.42□□□□□ -0.42
TRIM13-204ENST00000420995 NPYP01303 97 aa12.42□□□□□ -0.42
TRIM13-204ENST00000420995 EGR2P11161 476 aaPredicted RBP12.42□□□□□ -0.42
TRIM13-204ENST00000420995 KLRD1Q13241 179 aa12.42□□□□□ -0.42
TRIM13-204ENST00000420995 HES1Q14469 280 aa12.42□□□□□ -0.42
TRIM13-204ENST00000420995 FANCD2OSQ96PS1 177 aa12.42□□□□□ -0.42
TRIM13-204ENST00000420995 VPS25Q9BRG1 176 aa12.42□□□□□ -0.42
TRIM13-204ENST00000420995 THYN1Q9P016 225 aa12.42□□□□□ -0.42
TRIM13-204ENST00000420995 ANKHD1Q8IWZ3 2542 aaKnown RBP12.42□□□□□ -0.42
TRIM13-204ENST00000420995 ASH1LQ9NR48 2969 aaKnown RBP12.42□□□□□ -0.42
TRIM13-204ENST00000420995 F8W735 103 aaPredicted RBP12.41□□□□□ -0.42
TRIM13-204ENST00000420995 PPBPP02775 128 aa12.41□□□□□ -0.42
TRIM13-204ENST00000420995 ZNF80P51504 273 aaPredicted RBP12.41□□□□□ -0.42
TRIM13-204ENST00000420995 RPS20P60866 119 aaKnown RBP12.41□□□□□ -0.42
TRIM13-204ENST00000420995 PDE6HQ13956 83 aa12.41□□□□□ -0.42
TRIM13-204ENST00000420995 IGHV3OR16-8A0A075B7F1 116 aa12.41□□□□□ -0.42
TRIM13-204ENST00000420995 NPIPB5A8MRT5 1133 aa12.41□□□□□ -0.42
TRIM13-204ENST00000420995 HBDP02042 147 aa12.41□□□□□ -0.42
TRIM13-204ENST00000420995 SEC11AP67812 179 aa12.41□□□□□ -0.42
TRIM13-204ENST00000420995 TWIST1Q15672 202 aa12.41□□□□□ -0.42
TRIM13-204ENST00000420995 LGALS9BQ3B8N2 356 aa12.41□□□□□ -0.42
TRIM13-204ENST00000420995 LGALS9CQ6DKI2 356 aa12.41□□□□□ -0.42
TRIM13-204ENST00000420995 CD3EP07766 207 aa12.41□□□□□ -0.42
TRIM13-204ENST00000420995 HLA-DMBP28068 263 aa12.41□□□□□ -0.42
TRIM13-204ENST00000420995 NDPQ00604 133 aa12.41□□□□□ -0.42
TRIM13-204ENST00000420995 PAX8Q06710 450 aa12.41□□□□□ -0.42
TRIM13-204ENST00000420995 CFHR4Q92496 578 aa12.41□□□□□ -0.42
TRIM13-204ENST00000420995 PRR25Q96S07 402 aa12.41□□□□□ -0.42
TRIM13-204ENST00000420995 RAB1BQ9H0U4 201 aa12.41□□□□□ -0.42
TRIM13-204ENST00000420995 CKS2P33552 79 aa12.4□□□□□ -0.42
TRIM13-204ENST00000420995 BOD1L2Q8IYS8 172 aa12.4□□□□□ -0.42
TRIM13-204ENST00000420995 LINC01560Q8TB33 94 aa12.4□□□□□ -0.42
TRIM13-204ENST00000420995 JMJD8Q96S16 334 aa12.4□□□□□ -0.42
TRIM13-204ENST00000420995 VGLL1Q99990 258 aa12.4□□□□□ -0.42
TRIM13-204ENST00000420995 IGLV11-55A0A075B6I3 123 aa12.4□□□□□ -0.43
TRIM13-204ENST00000420995 PRSS57Q6UWY2 283 aa12.4□□□□□ -0.43
TRIM13-204ENST00000420995 TMEM190Q8WZ59 177 aa12.4□□□□□ -0.43
TRIM13-204ENST00000420995 MSRB1Q9NZV6 116 aa12.4□□□□□ -0.43
TRIM13-204ENST00000420995 DPM3Q9P2X0 92 aa12.4□□□□□ -0.43
TRIM13-204ENST00000420995 GAS8-AS1O95177 125 aa12.39□□□□□ -0.43
TRIM13-204ENST00000420995 NMUP48645 174 aa12.39□□□□□ -0.43
TRIM13-204ENST00000420995 MFAP4P55083 255 aa12.39□□□□□ -0.43
TRIM13-204ENST00000420995 PCP2Q8IVA1 136 aa12.39□□□□□ -0.43
TRIM13-204ENST00000420995 IFI27L1Q96BM0 104 aa12.39□□□□□ -0.43
TRIM13-204ENST00000420995 IGHV3-35A0A0C4DH35 117 aa12.39□□□□□ -0.43
TRIM13-204ENST00000420995 COTL1Q14019 142 aa12.39□□□□□ -0.43
TRIM13-204ENST00000420995 ZNF672Q499Z4 452 aaPredicted RBP12.39□□□□□ -0.43
TRIM13-204ENST00000420995 FER1L6-AS1Q8NA97 138 aa12.39□□□□□ -0.43
TRIM13-204ENST00000420995 DPF1Q92782 380 aa12.39□□□□□ -0.43
TRIM13-204ENST00000420995 C18orf15Q96N68 181 aa12.39□□□□□ -0.43
TRIM13-204ENST00000420995 DKK2Q9UBU2 259 aa12.39□□□□□ -0.43
TRIM13-204ENST00000420995 WNK2Q9Y3S1 2297 aa12.39□□□□□ -0.43
TRIM13-204ENST00000420995 GAGE10A6NGK3 116 aa12.38□□□□□ -0.43
TRIM13-204ENST00000420995 SMAD7O15105 426 aaKnown RBP12.38□□□□□ -0.43
TRIM13-204ENST00000420995 NDUFA3O95167 84 aa12.38□□□□□ -0.43
TRIM13-204ENST00000420995 C5orf64Q2M2E5 130 aa12.38□□□□□ -0.43
TRIM13-204ENST00000420995 C21orf62Q9NYP8 219 aa12.38□□□□□ -0.43
TRIM13-204ENST00000420995 ZNF575Q86XF7 245 aa12.38□□□□□ -0.43
TRIM13-204ENST00000420995 OR1N2Q8NGR9 330 aa12.38□□□□□ -0.43
TRIM13-204ENST00000420995 SPTA1P02549 2419 aa12.37□□□□□ -0.43
TRIM13-204ENST00000420995 H3BUT2 72 aa12.37□□□□□ -0.43
TRIM13-204ENST00000420995 NPBQ8NG41 125 aa12.37□□□□□ -0.43
TRIM13-204ENST00000420995 A1L4Q6 167 aa12.37□□□□□ -0.43
TRIM13-204ENST00000420995 IGHG4P01861 327 aa12.37□□□□□ -0.43
TRIM13-204ENST00000420995 GRNP28799 593 aaKnown RBP12.37□□□□□ -0.43
TRIM13-204ENST00000420995 KIR3DS1Q14943 382 aa12.37□□□□□ -0.43
TRIM13-204ENST00000420995 ARPC1AQ92747 370 aa12.37□□□□□ -0.43
TRIM13-204ENST00000420995 NCBP2LA6PVI3 153 aaKnown RBP12.36□□□□□ -0.43
TRIM13-204ENST00000420995 NDUFS7O75251 213 aa12.36□□□□□ -0.43
TRIM13-204ENST00000420995 SAP30O75446 220 aa12.36□□□□□ -0.43
TRIM13-204ENST00000420995 RPL7P18124 248 aaKnown RBP12.36□□□□□ -0.43
TRIM13-204ENST00000420995 ADAMTSL5Q6ZMM2 481 aa12.36□□□□□ -0.43
TRIM13-204ENST00000420995 LY6G5BQ8NDX9 201 aa12.36□□□□□ -0.43
TRIM13-204ENST00000420995 RAB37Q96AX2 223 aa12.36□□□□□ -0.43
TRIM13-204ENST00000420995 SMAD5-AS1Q9Y6J3 95 aa12.36□□□□□ -0.43
TRIM13-204ENST00000420995 NBL1P41271 181 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms