RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 APOHP02749 345 aaPredicted RBP11.25□□□□□ -0.61
HLA-DPA1-242ENST00000419277 FRMD6-AS1P0C7T7 363 aa11.25□□□□□ -0.61
HLA-DPA1-242ENST00000419277 PMCHP20382 165 aa11.25□□□□□ -0.61
HLA-DPA1-242ENST00000419277 PPIFP30405 207 aaKnown RBP11.25□□□□□ -0.61
HLA-DPA1-242ENST00000419277 CAMPP49913 170 aa11.25□□□□□ -0.61
HLA-DPA1-242ENST00000419277 LOXL1Q08397 574 aaPredicted RBP11.25□□□□□ -0.61
HLA-DPA1-242ENST00000419277 SPTAN1Q13813 2472 aaKnown RBP11.25□□□□□ -0.61
HLA-DPA1-242ENST00000419277 MYO18BQ8IUG5 2567 aa11.25□□□□□ -0.61
HLA-DPA1-242ENST00000419277 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.24□□□□□ -0.61
HLA-DPA1-242ENST00000419277 SCGB1D1O95968 90 aa11.24□□□□□ -0.61
HLA-DPA1-242ENST00000419277 DDTP30046 118 aa11.24□□□□□ -0.61
HLA-DPA1-242ENST00000419277 DEFA6Q01524 100 aa11.24□□□□□ -0.61
HLA-DPA1-242ENST00000419277 LBHQ53QV2 105 aaPredicted RBP11.24□□□□□ -0.61
HLA-DPA1-242ENST00000419277 C9orf139Q6ZV77 190 aa11.24□□□□□ -0.61
HLA-DPA1-242ENST00000419277 PGLYRP4Q96LB8 373 aa11.24□□□□□ -0.61
HLA-DPA1-242ENST00000419277 LENEPQ9Y5L5 61 aa11.24□□□□□ -0.61
HLA-DPA1-242ENST00000419277 SMAD5-AS1Q9Y6J3 95 aa11.24□□□□□ -0.61
HLA-DPA1-242ENST00000419277 NUPR1O60356 82 aa11.23□□□□□ -0.61
HLA-DPA1-242ENST00000419277 HSBP1O75506 76 aa11.23□□□□□ -0.61
HLA-DPA1-242ENST00000419277 ARL3P36405 182 aa11.23□□□□□ -0.61
HLA-DPA1-242ENST00000419277 LCN12Q6JVE5 192 aa11.23□□□□□ -0.61
HLA-DPA1-242ENST00000419277 ZNF493Q6ZR52 646 aa11.23□□□□□ -0.61
HLA-DPA1-242ENST00000419277 ZNF843Q8N446 348 aa11.23□□□□□ -0.61
HLA-DPA1-242ENST00000419277 LOC102724200A0A096LPH7 203 aaPredicted RBP11.23□□□□□ -0.61
HLA-DPA1-242ENST00000419277 A0A1B0GUS0 222 aa11.23□□□□□ -0.61
HLA-DPA1-242ENST00000419277 TMEM189A5PLL7 270 aa11.23□□□□□ -0.61
HLA-DPA1-242ENST00000419277 CDPF1Q6NVV7 123 aa11.23□□□□□ -0.61
HLA-DPA1-242ENST00000419277 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.23□□□□□ -0.61
HLA-DPA1-242ENST00000419277 TEX43Q6ZNM6 134 aa11.23□□□□□ -0.61
HLA-DPA1-242ENST00000419277 Q6ZWC4 215 aa11.23□□□□□ -0.61
HLA-DPA1-242ENST00000419277 BCL6BQ8N143 479 aaPredicted RBP11.23□□□□□ -0.61
HLA-DPA1-242ENST00000419277 A0A096LNT2 108 aa11.22□□□□□ -0.61
HLA-DPA1-242ENST00000419277 KIR2DL5BA0A0G2JN68 375 aa11.22□□□□□ -0.61
HLA-DPA1-242ENST00000419277 KIR2DL5BA0A0G2JPC4 375 aa11.22□□□□□ -0.61
HLA-DPA1-242ENST00000419277 IGLV1-40P01703 118 aa11.22□□□□□ -0.61
HLA-DPA1-242ENST00000419277 CTRLP40313 264 aa11.22□□□□□ -0.61
HLA-DPA1-242ENST00000419277 KIAA1644Q3SXP7 199 aa11.22□□□□□ -0.61
HLA-DPA1-242ENST00000419277 GDF5OSQ5U4N7 250 aa11.22□□□□□ -0.61
HLA-DPA1-242ENST00000419277 KIR2DL5AQ8N109 375 aa11.22□□□□□ -0.61
HLA-DPA1-242ENST00000419277 ASCL2Q99929 193 aa11.22□□□□□ -0.61
HLA-DPA1-242ENST00000419277 FLNCQ14315 2725 aa11.22□□□□□ -0.61
HLA-DPA1-242ENST00000419277 LINC01548A6NM66 108 aa11.21□□□□□ -0.61
HLA-DPA1-242ENST00000419277 RNF224P0DH78 156 aa11.21□□□□□ -0.61
HLA-DPA1-242ENST00000419277 C9orf152Q5JTZ5 239 aa11.21□□□□□ -0.61
HLA-DPA1-242ENST00000419277 MRPL52Q86TS9 123 aaKnown RBP11.21□□□□□ -0.61
HLA-DPA1-242ENST00000419277 TEX29Q8N6K0 151 aa11.21□□□□□ -0.61
HLA-DPA1-242ENST00000419277 NRN1Q9NPD7 142 aa11.21□□□□□ -0.61
HLA-DPA1-242ENST00000419277 IGHV3OR16-10A0A075B7F0 116 aa11.21□□□□□ -0.62
HLA-DPA1-242ENST00000419277 IGKV2-40A0A087WW87 121 aaPredicted RBP11.21□□□□□ -0.62
HLA-DPA1-242ENST00000419277 SH2D1AO60880 128 aa11.21□□□□□ -0.62
HLA-DPA1-242ENST00000419277 IGKV2D-40P01614 121 aaPredicted RBP11.21□□□□□ -0.62
HLA-DPA1-242ENST00000419277 OR5AL1P0C617 328 aa11.21□□□□□ -0.62
HLA-DPA1-242ENST00000419277 ZNF664Q8N3J9 261 aa11.21□□□□□ -0.62
HLA-DPA1-242ENST00000419277 GLMPQ8WWB7 406 aa11.21□□□□□ -0.62
HLA-DPA1-242ENST00000419277 RCHY1Q96PM5 261 aa11.21□□□□□ -0.62
HLA-DPA1-242ENST00000419277 CNFNQ9BYD5 112 aa11.21□□□□□ -0.62
HLA-DPA1-242ENST00000419277 FABP5P3A8MUU1 101 aa11.2□□□□□ -0.62
HLA-DPA1-242ENST00000419277 F2Z2F3 143 aa11.2□□□□□ -0.62
HLA-DPA1-242ENST00000419277 IGHG4P01861 327 aa11.2□□□□□ -0.62
HLA-DPA1-242ENST00000419277 CRIP1P50238 77 aa11.2□□□□□ -0.62
HLA-DPA1-242ENST00000419277 HIST1H1AQ02539 215 aaPredicted RBP11.2□□□□□ -0.62
HLA-DPA1-242ENST00000419277 CFHR3Q02985 330 aa11.2□□□□□ -0.62
HLA-DPA1-242ENST00000419277 TMEM78Q5T7P6 136 aa11.2□□□□□ -0.62
HLA-DPA1-242ENST00000419277 C9orf47Q6ZRZ4 202 aa11.2□□□□□ -0.62
HLA-DPA1-242ENST00000419277 TRBV7-9A0A0J9YWB2 115 aa11.19□□□□□ -0.62
HLA-DPA1-242ENST00000419277 PMCHL1Q16048 86 aa11.19□□□□□ -0.62
HLA-DPA1-242ENST00000419277 LINC01559Q495D7 138 aa11.19□□□□□ -0.62
HLA-DPA1-242ENST00000419277 C8orf86Q6ZUL3 223 aa11.19□□□□□ -0.62
HLA-DPA1-242ENST00000419277 REC114Q7Z4M0 266 aa11.19□□□□□ -0.62
HLA-DPA1-242ENST00000419277 C20orf144Q9BQM9 153 aa11.19□□□□□ -0.62
HLA-DPA1-242ENST00000419277 NDUFAF3Q9BU61 184 aa11.19□□□□□ -0.62
HLA-DPA1-242ENST00000419277 SSBP4Q9BWG4 385 aaPredicted RBP11.19□□□□□ -0.62
HLA-DPA1-242ENST00000419277 UBR5O95071 2799 aaPredicted RBP11.19□□□□□ -0.62
HLA-DPA1-242ENST00000419277 COL12A1Q99715 3063 aa11.19□□□□□ -0.62
HLA-DPA1-242ENST00000419277 C8orf49Q96NF6 230 aa11.18□□□□□ -0.62
HLA-DPA1-242ENST00000419277 ZNF705FA8MVS1 300 aaPredicted RBP11.18□□□□□ -0.62
HLA-DPA1-242ENST00000419277 K7EMT4 169 aa11.18□□□□□ -0.62
HLA-DPA1-242ENST00000419277 ARMS2P0C7Q2 107 aa11.18□□□□□ -0.62
HLA-DPA1-242ENST00000419277 ZNF705DP0CH99 300 aaPredicted RBP11.18□□□□□ -0.62
HLA-DPA1-242ENST00000419277 ZNF705BP0CI00 300 aaPredicted RBP11.18□□□□□ -0.62
HLA-DPA1-242ENST00000419277 ZNF138P52744 262 aa11.18□□□□□ -0.62
HLA-DPA1-242ENST00000419277 LY6EQ16553 131 aa11.18□□□□□ -0.62
HLA-DPA1-242ENST00000419277 PRSS57Q6UWY2 283 aa11.18□□□□□ -0.62
HLA-DPA1-242ENST00000419277 VAMP8Q9BV40 100 aa11.18□□□□□ -0.62
HLA-DPA1-242ENST00000419277 NPFFR1Q9GZQ6 430 aa11.18□□□□□ -0.62
HLA-DPA1-242ENST00000419277 M0R2Z0 102 aa11.17□□□□□ -0.62
HLA-DPA1-242ENST00000419277 IGLC6P0CF74 106 aa11.17□□□□□ -0.62
HLA-DPA1-242ENST00000419277 FER1L6-AS1Q8NA97 138 aa11.17□□□□□ -0.62
HLA-DPA1-242ENST00000419277 BBC3Q96PG8 261 aaPredicted RBP11.17□□□□□ -0.62
HLA-DPA1-242ENST00000419277 VGLL1Q99990 258 aa11.17□□□□□ -0.62
HLA-DPA1-242ENST00000419277 DAZ1Q9NQZ3 744 aaKnown RBP11.17□□□□□ -0.62
HLA-DPA1-242ENST00000419277 ANKRD17O75179 2603 aaKnown RBP11.17□□□□□ -0.62
HLA-DPA1-242ENST00000419277 IGHV3-35A0A0C4DH35 117 aa11.16□□□□□ -0.62
HLA-DPA1-242ENST00000419277 C20orf202A1L168 122 aa11.16□□□□□ -0.62
HLA-DPA1-242ENST00000419277 FSHBP01225 129 aa11.16□□□□□ -0.62
HLA-DPA1-242ENST00000419277 PF4V1P10720 104 aa11.16□□□□□ -0.62
HLA-DPA1-242ENST00000419277 RNASEKQ6P5S7 137 aaKnown RBP11.16□□□□□ -0.62
HLA-DPA1-242ENST00000419277 NIT1Q86X76 327 aa11.16□□□□□ -0.62
HLA-DPA1-242ENST00000419277 LAMTOR2Q9Y2Q5 125 aa11.16□□□□□ -0.62
HLA-DPA1-242ENST00000419277 OVOL1O14753 267 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms