RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 PRR27Q6MZM9 219 aa6.95□□□□□ -1.3
LINCMD1-201ENST00000418518 Q71RC1 249 aaPredicted RBP6.95□□□□□ -1.3
LINCMD1-201ENST00000418518 PRNTQ86SH4 94 aa6.95□□□□□ -1.3
LINCMD1-201ENST00000418518 TEX29Q8N6K0 151 aa6.95□□□□□ -1.3
LINCMD1-201ENST00000418518 MAPK1IP1LQ8NDC0 245 aa6.95□□□□□ -1.3
LINCMD1-201ENST00000418518 MYOZ3Q8TDC0 251 aa6.95□□□□□ -1.3
LINCMD1-201ENST00000418518 ZC2HC1AQ96GY0 325 aa6.95□□□□□ -1.3
LINCMD1-201ENST00000418518 SGK494Q96LW2 274 aa6.95□□□□□ -1.3
LINCMD1-201ENST00000418518 GPR61Q9BZJ8 451 aa6.95□□□□□ -1.3
LINCMD1-201ENST00000418518 KLK15Q9H2R5 256 aa6.95□□□□□ -1.3
LINCMD1-201ENST00000418518 SVEP1Q4LDE5 3571 aa6.95□□□□□ -1.3
LINCMD1-201ENST00000418518 HELZ2Q9BYK8 2649 aaKnown RBP6.95□□□□□ -1.3
LINCMD1-201ENST00000418518 MAP1AP78559 2803 aaPredicted RBP6.94□□□□□ -1.3
LINCMD1-201ENST00000418518 IGHV3-35A0A0C4DH35 117 aa6.94□□□□□ -1.3
LINCMD1-201ENST00000418518 HIGD1CA8MV81 97 aa6.94□□□□□ -1.3
LINCMD1-201ENST00000418518 TRBV12-3P01733 135 aa6.94□□□□□ -1.3
LINCMD1-201ENST00000418518 PF4V1P10720 104 aa6.94□□□□□ -1.3
LINCMD1-201ENST00000418518 S100A2P29034 98 aa6.94□□□□□ -1.3
LINCMD1-201ENST00000418518 SRSF2Q01130 221 aaKnown RBP6.94□□□□□ -1.3
LINCMD1-201ENST00000418518 Q0VG73 95 aa6.94□□□□□ -1.3
LINCMD1-201ENST00000418518 Q8N2B8 174 aa6.94□□□□□ -1.3
LINCMD1-201ENST00000418518 CIARTQ8N365 385 aaPredicted RBP6.94□□□□□ -1.3
LINCMD1-201ENST00000418518 RNF152Q8N8N0 203 aa6.94□□□□□ -1.3
LINCMD1-201ENST00000418518 HIST1H2BLQ99880 126 aa6.94□□□□□ -1.3
LINCMD1-201ENST00000418518 ZNF702PQ9H963 129 aa6.94□□□□□ -1.3
LINCMD1-201ENST00000418518 PPP1R14DQ9NXH3 145 aa6.94□□□□□ -1.3
LINCMD1-201ENST00000418518 CSMD1Q96PZ7 3565 aa6.94□□□□□ -1.3
LINCMD1-201ENST00000418518 NBPF19A0A087WUL8 3843 aa6.94□□□□□ -1.3
LINCMD1-201ENST00000418518 ZFHX3Q15911 3703 aa6.93□□□□□ -1.3
LINCMD1-201ENST00000418518 IGHV3OR16-8A0A075B7F1 116 aa6.93□□□□□ -1.3
LINCMD1-201ENST00000418518 IGKV2-40A0A087WW87 121 aaPredicted RBP6.93□□□□□ -1.3
LINCMD1-201ENST00000418518 TRAV8-2A0A0B4J237 113 aa6.93□□□□□ -1.3
LINCMD1-201ENST00000418518 IGKV2D-40P01614 121 aaPredicted RBP6.93□□□□□ -1.3
LINCMD1-201ENST00000418518 APOHP02749 345 aaPredicted RBP6.93□□□□□ -1.3
LINCMD1-201ENST00000418518 AMBPP02760 352 aa6.93□□□□□ -1.3
LINCMD1-201ENST00000418518 CRIP1P50238 77 aa6.93□□□□□ -1.3
LINCMD1-201ENST00000418518 SAPCD1Q5SSQ6 148 aa6.93□□□□□ -1.3
LINCMD1-201ENST00000418518 LCN12Q6JVE5 192 aa6.93□□□□□ -1.3
LINCMD1-201ENST00000418518 MRPL54Q6P161 138 aaKnown RBP6.93□□□□□ -1.3
LINCMD1-201ENST00000418518 RBPMS2Q6ZRY4 209 aaKnown RBP6.93□□□□□ -1.3
LINCMD1-201ENST00000418518 TMEM86BQ8N661 226 aa6.93□□□□□ -1.3
LINCMD1-201ENST00000418518 GATD1Q8NB37 220 aa6.93□□□□□ -1.3
LINCMD1-201ENST00000418518 OR4X2Q8NGF9 303 aa6.93□□□□□ -1.3
LINCMD1-201ENST00000418518 GTSF1Q8WW33 167 aa6.93□□□□□ -1.3
LINCMD1-201ENST00000418518 DAZAP1Q96EP5 407 aaKnown RBP6.93□□□□□ -1.3
LINCMD1-201ENST00000418518 PRR25Q96S07 402 aa6.93□□□□□ -1.3
LINCMD1-201ENST00000418518 TP53TG3Q9ULZ0 132 aa6.93□□□□□ -1.3
LINCMD1-201ENST00000418518 CELSR1Q9NYQ6 3014 aa6.93□□□□□ -1.3
LINCMD1-201ENST00000418518 K7EMT4 169 aa6.92□□□□□ -1.3
LINCMD1-201ENST00000418518 SOCS3O14543 225 aa6.92□□□□□ -1.3
LINCMD1-201ENST00000418518 ELANEP08246 267 aa6.92□□□□□ -1.3
LINCMD1-201ENST00000418518 LINC00310P59036 64 aa6.92□□□□□ -1.3
LINCMD1-201ENST00000418518 FOXE3Q13461 319 aa6.92□□□□□ -1.3
LINCMD1-201ENST00000418518 TMEM95Q3KNT9 176 aa6.92□□□□□ -1.3
LINCMD1-201ENST00000418518 OR10J3Q5JRS4 329 aa6.92□□□□□ -1.3
LINCMD1-201ENST00000418518 GDF5OSQ5U4N7 250 aa6.92□□□□□ -1.3
LINCMD1-201ENST00000418518 Q6AWC8 147 aa6.92□□□□□ -1.3
LINCMD1-201ENST00000418518 UNQ9165/PRO28630Q6UXU0 137 aa6.92□□□□□ -1.3
LINCMD1-201ENST00000418518 C8orf86Q6ZUL3 223 aa6.92□□□□□ -1.3
LINCMD1-201ENST00000418518 OR2D3Q8NGH3 330 aa6.92□□□□□ -1.3
LINCMD1-201ENST00000418518 PACRGQ96M98 296 aaPredicted RBP6.92□□□□□ -1.3
LINCMD1-201ENST00000418518 NPFFR1Q9GZQ6 430 aa6.92□□□□□ -1.3
LINCMD1-201ENST00000418518 TEX15Q9BXT5 2789 aa6.92□□□□□ -1.3
LINCMD1-201ENST00000418518 TLN2Q9Y4G6 2542 aa6.92□□□□□ -1.3
LINCMD1-201ENST00000418518 FLNAP21333 2647 aaKnown RBP6.91□□□□□ -1.3
LINCMD1-201ENST00000418518 IGHV7-4-1A0A0J9YVY3 117 aa6.91□□□□□ -1.3
LINCMD1-201ENST00000418518 A0A1B0GW15 77 aa6.91□□□□□ -1.3
LINCMD1-201ENST00000418518 A0A1W2PS18 150 aa6.91□□□□□ -1.3
LINCMD1-201ENST00000418518 HAX1O00165 279 aa6.91□□□□□ -1.3
LINCMD1-201ENST00000418518 SMAD7O15105 426 aaKnown RBP6.91□□□□□ -1.3
LINCMD1-201ENST00000418518 CT45A10P0DMU9 189 aa6.91□□□□□ -1.3
LINCMD1-201ENST00000418518 FABP4P15090 132 aa6.91□□□□□ -1.3
LINCMD1-201ENST00000418518 CRISP2P16562 243 aa6.91□□□□□ -1.3
LINCMD1-201ENST00000418518 HLA-DMBP28068 263 aa6.91□□□□□ -1.3
LINCMD1-201ENST00000418518 HBBP68871 147 aa6.91□□□□□ -1.3
LINCMD1-201ENST00000418518 SLC35B1P78383 322 aa6.91□□□□□ -1.3
LINCMD1-201ENST00000418518 PYY3Q5JQD4 70 aa6.91□□□□□ -1.3
LINCMD1-201ENST00000418518 FAM162BQ5T6X4 162 aa6.91□□□□□ -1.3
LINCMD1-201ENST00000418518 C9orf47Q6ZRZ4 202 aa6.91□□□□□ -1.3
LINCMD1-201ENST00000418518 TCF24Q7RTU0 167 aa6.91□□□□□ -1.3
LINCMD1-201ENST00000418518 GPHB5Q86YW7 130 aa6.91□□□□□ -1.3
LINCMD1-201ENST00000418518 OR10D4PQ8NGN7 298 aa6.91□□□□□ -1.3
LINCMD1-201ENST00000418518 TMEM18Q96B42 140 aa6.91□□□□□ -1.3
LINCMD1-201ENST00000418518 C8orf49Q96NF6 230 aa6.91□□□□□ -1.3
LINCMD1-201ENST00000418518 VGLL1Q99990 258 aa6.91□□□□□ -1.3
LINCMD1-201ENST00000418518 PEF1Q9UBV8 284 aaKnown RBP6.91□□□□□ -1.3
LINCMD1-201ENST00000418518 CCDC168Q8NDH2 2452 aa6.91□□□□□ -1.3
LINCMD1-201ENST00000418518 ANK3Q12955 4377 aaKnown RBP6.9□□□□□ -1.3
LINCMD1-201ENST00000418518 CSMD2Q7Z408 3487 aa6.9□□□□□ -1.3
LINCMD1-201ENST00000418518 PDZD2O15018 2839 aa6.9□□□□□ -1.3
LINCMD1-201ENST00000418518 ZNF705FA8MVS1 300 aaPredicted RBP6.9□□□□□ -1.3
LINCMD1-201ENST00000418518 A8MWP6 167 aa6.9□□□□□ -1.3
LINCMD1-201ENST00000418518 PRAC2D3DTV9 90 aa6.9□□□□□ -1.3
LINCMD1-201ENST00000418518 HOXA3O43365 443 aaPredicted RBP6.9□□□□□ -1.3
LINCMD1-201ENST00000418518 ZNF207O43670 478 aaKnown RBP6.9□□□□□ -1.3
LINCMD1-201ENST00000418518 SH2D1AO60880 128 aa6.9□□□□□ -1.3
LINCMD1-201ENST00000418518 IGHV3-11P01762 117 aa6.9□□□□□ -1.3
LINCMD1-201ENST00000418518 APCSP02743 223 aa6.9□□□□□ -1.3
LINCMD1-201ENST00000418518 S100A12P80511 92 aa6.9□□□□□ -1.3
LINCMD1-201ENST00000418518 KRTAP1-1Q07627 177 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms