RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 SLC25A31Q9H0C2 315 aa17.93■□□□□ 0.46
VEGFA-208ENST00000417285 TRAV5A0A0B4J249 113 aa17.92■□□□□ 0.46
VEGFA-208ENST00000417285 E5RGE8 158 aa17.92■□□□□ 0.46
VEGFA-208ENST00000417285 H3BQ15 152 aa17.92■□□□□ 0.46
VEGFA-208ENST00000417285 PRM2P04554 102 aa17.92■□□□□ 0.46
VEGFA-208ENST00000417285 PRB4P10163 310 aaPredicted RBP17.92■□□□□ 0.46
VEGFA-208ENST00000417285 TAS2R60P59551 318 aa17.92■□□□□ 0.46
VEGFA-208ENST00000417285 CYCSP99999 105 aaKnown RBP17.92■□□□□ 0.46
VEGFA-208ENST00000417285 TMEM88Q6PEY1 159 aa17.92■□□□□ 0.46
VEGFA-208ENST00000417285 C15orf53Q8NAA6 179 aa17.92■□□□□ 0.46
VEGFA-208ENST00000417285 SAT2Q96F10 170 aaPredicted RBP17.92■□□□□ 0.46
VEGFA-208ENST00000417285 M0R2N4 97 aa17.9■□□□□ 0.46
VEGFA-208ENST00000417285 AZU1P20160 251 aa17.9■□□□□ 0.46
VEGFA-208ENST00000417285 DEFA1P59665 94 aa17.9■□□□□ 0.46
VEGFA-208ENST00000417285 DEFA3P59666 94 aa17.9■□□□□ 0.46
VEGFA-208ENST00000417285 NHLH2Q02577 135 aa17.9■□□□□ 0.46
VEGFA-208ENST00000417285 LRRC37A5PQ49AS3 106 aa17.9■□□□□ 0.46
VEGFA-208ENST00000417285 ZNF493Q6ZR52 646 aa17.9■□□□□ 0.46
VEGFA-208ENST00000417285 NPCDR1Q9BY65 106 aa17.9■□□□□ 0.46
VEGFA-208ENST00000417285 ZNF253O75346 499 aa17.89■□□□□ 0.45
VEGFA-208ENST00000417285 DEFB130BP0DP73 79 aa17.89■□□□□ 0.45
VEGFA-208ENST00000417285 DEFB130AP0DP74 79 aa17.89■□□□□ 0.45
VEGFA-208ENST00000417285 OR5C1Q8NGR4 320 aa17.89■□□□□ 0.45
VEGFA-208ENST00000417285 C20orf144Q9BQM9 153 aa17.89■□□□□ 0.45
VEGFA-208ENST00000417285 MARVELD1Q9BSK0 173 aa17.89■□□□□ 0.45
VEGFA-208ENST00000417285 OR5AC2Q9NZP5 309 aa17.89■□□□□ 0.45
VEGFA-208ENST00000417285 PRAC2D3DTV9 90 aa17.88■□□□□ 0.45
VEGFA-208ENST00000417285 FAM3BP58499 235 aaPredicted RBP17.88■□□□□ 0.45
VEGFA-208ENST00000417285 C16orf74Q96GX8 76 aa17.88■□□□□ 0.45
VEGFA-208ENST00000417285 ZNF586Q9NXT0 402 aa17.88■□□□□ 0.45
VEGFA-208ENST00000417285 TMEM14CQ9P0S9 112 aa17.88■□□□□ 0.45
VEGFA-208ENST00000417285 PLAC8L1A1L4L8 177 aa17.87■□□□□ 0.45
VEGFA-208ENST00000417285 CBY3A6NI87 242 aa17.87■□□□□ 0.45
VEGFA-208ENST00000417285 H7BYZ3 331 aa17.87■□□□□ 0.45
VEGFA-208ENST00000417285 HTN1P15515 57 aa17.87■□□□□ 0.45
VEGFA-208ENST00000417285 TIMM8BQ9Y5J9 83 aaPredicted RBP17.87■□□□□ 0.45
VEGFA-208ENST00000417285 PRSS29PA6NIE9 313 aa17.86■□□□□ 0.45
VEGFA-208ENST00000417285 ATP5G1P05496 136 aa17.86■□□□□ 0.45
VEGFA-208ENST00000417285 ATP5G3P48201 142 aa17.86■□□□□ 0.45
VEGFA-208ENST00000417285 THAP6Q8TBB0 222 aa17.86■□□□□ 0.45
VEGFA-208ENST00000417285 TRBV19A0A075B6N1 114 aa17.85■□□□□ 0.45
VEGFA-208ENST00000417285 H0YIZ8 118 aa17.85■□□□□ 0.45
VEGFA-208ENST00000417285 RTL8CO15255 209 aa17.85■□□□□ 0.45
VEGFA-208ENST00000417285 HIST1H1EP10412 219 aaKnown RBP17.85■□□□□ 0.45
VEGFA-208ENST00000417285 Q6ZR54 194 aa17.85■□□□□ 0.45
VEGFA-208ENST00000417285 MRPL53Q96EL3 112 aaKnown RBP17.85■□□□□ 0.45
VEGFA-208ENST00000417285 KCNIP2Q9NS61 270 aa17.85■□□□□ 0.45
VEGFA-208ENST00000417285 DNAH17Q9UFH2 4485 aa17.84■□□□□ 0.45
VEGFA-208ENST00000417285 SSNA1O43805 119 aa17.84■□□□□ 0.45
VEGFA-208ENST00000417285 PDE6HQ13956 83 aa17.84■□□□□ 0.45
VEGFA-208ENST00000417285 CLINT1Q14677 625 aa17.84■□□□□ 0.45
VEGFA-208ENST00000417285 FCN2Q15485 313 aa17.84■□□□□ 0.45
VEGFA-208ENST00000417285 SOHLH1Q5JUK2 328 aa17.84■□□□□ 0.45
VEGFA-208ENST00000417285 ODF3Q96PU9 254 aa17.84■□□□□ 0.45
VEGFA-208ENST00000417285 TIMM9Q9Y5J7 89 aa17.84■□□□□ 0.45
VEGFA-208ENST00000417285 HERC2O95714 4834 aa17.84■□□□□ 0.45
VEGFA-208ENST00000417285 DNAH2Q9P225 4427 aa17.83■□□□□ 0.45
VEGFA-208ENST00000417285 IGLV2-18A0A075B6J9 118 aa17.83■□□□□ 0.44
VEGFA-208ENST00000417285 A0A1B0GVY2 172 aa17.83■□□□□ 0.44
VEGFA-208ENST00000417285 NPIPB6E9PJ23 425 aa17.83■□□□□ 0.44
VEGFA-208ENST00000417285 F5H768 121 aa17.83■□□□□ 0.44
VEGFA-208ENST00000417285 LEPP41159 167 aa17.83■□□□□ 0.44
VEGFA-208ENST00000417285 H2BFSP57053 126 aa17.83■□□□□ 0.44
VEGFA-208ENST00000417285 GCSAMLQ5JQS6 135 aa17.83■□□□□ 0.44
VEGFA-208ENST00000417285 GFI1BQ5VTD9 330 aa17.83■□□□□ 0.44
VEGFA-208ENST00000417285 CCDC28AQ8IWP9 274 aa17.83■□□□□ 0.44
VEGFA-208ENST00000417285 TMEM263Q8WUH6 116 aaKnown RBP17.83■□□□□ 0.44
VEGFA-208ENST00000417285 PPP1R1CQ8WVI7 109 aa17.83■□□□□ 0.44
VEGFA-208ENST00000417285 PARD6GQ9BYG4 376 aaPredicted RBP17.83■□□□□ 0.44
VEGFA-208ENST00000417285 BATF3Q9NR55 127 aa17.83■□□□□ 0.44
VEGFA-208ENST00000417285 PRELID1Q9Y255 219 aa17.83■□□□□ 0.44
VEGFA-208ENST00000417285 PET100P0DJ07 73 aa17.82■□□□□ 0.44
VEGFA-208ENST00000417285 ATG101Q9BSB4 218 aa17.82■□□□□ 0.44
VEGFA-208ENST00000417285 WDR61Q9GZS3 305 aaKnown RBP17.82■□□□□ 0.44
VEGFA-208ENST00000417285 CT45A10P0DMU9 189 aa17.81■□□□□ 0.44
VEGFA-208ENST00000417285 PYYP10082 97 aa17.81■□□□□ 0.44
VEGFA-208ENST00000417285 KIR3DS1Q14943 382 aa17.81■□□□□ 0.44
VEGFA-208ENST00000417285 RNASE8Q8TDE3 154 aaKnown RBP17.81■□□□□ 0.44
VEGFA-208ENST00000417285 C17orf112F2Z3M2 114 aa17.8■□□□□ 0.44
VEGFA-208ENST00000417285 BLNKQ8WV28 456 aa17.8■□□□□ 0.44
VEGFA-208ENST00000417285 SLC25A2Q9BXI2 301 aa17.8■□□□□ 0.44
VEGFA-208ENST00000417285 AAMDCQ9H7C9 122 aa17.8■□□□□ 0.44
VEGFA-208ENST00000417285 NOP10Q9NPE3 64 aaKnown RBP17.8■□□□□ 0.44
VEGFA-208ENST00000417285 FAT2Q9NYQ8 4349 aa17.8■□□□□ 0.44
VEGFA-208ENST00000417285 J3KRW8 73 aa17.79■□□□□ 0.44
VEGFA-208ENST00000417285 M0R3E3 92 aa17.79■□□□□ 0.44
VEGFA-208ENST00000417285 NDUFB4O95168 129 aa17.79■□□□□ 0.44
VEGFA-208ENST00000417285 ATP5SQ99766 215 aa17.79■□□□□ 0.44
VEGFA-208ENST00000417285 MRPL32Q9BYC8 188 aaKnown RBP17.79■□□□□ 0.44
VEGFA-208ENST00000417285 MPC2O95563 127 aa17.78■□□□□ 0.44
VEGFA-208ENST00000417285 MIR17HGQ75NE6 70 aa17.78■□□□□ 0.44
VEGFA-208ENST00000417285 NUDT3O95989 172 aa17.77■□□□□ 0.44
VEGFA-208ENST00000417285 C1orf134Q5TEV5 83 aa17.77■□□□□ 0.44
VEGFA-208ENST00000417285 EXOC3-AS1Q8N2X6 119 aa17.77■□□□□ 0.44
VEGFA-208ENST00000417285 FAM167A-AS1Q96KT0 104 aa17.77■□□□□ 0.44
VEGFA-208ENST00000417285 LINC00477Q96M19 166 aa17.77■□□□□ 0.44
VEGFA-208ENST00000417285 HSPB11Q9Y547 144 aa17.77■□□□□ 0.44
VEGFA-208ENST00000417285 TRAV12-3A0A0B4J271 114 aa17.76■□□□□ 0.43
VEGFA-208ENST00000417285 CCL18P55774 89 aa17.76■□□□□ 0.43
VEGFA-208ENST00000417285 OR51M1Q9H341 326 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms