RNA–Protein interactions for RNA: ENST00000416842.1

AP001042.1-201, humanhuman

TSL 3 BASIC

Gene AP001042.1, Length 487 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001042.1-201ENST00000416842 TUBA4BQ9H853 241 aa6.1□□□□□ -1.43
AP001042.1-201ENST00000416842 TMEM242Q9NWH2 141 aa6.1□□□□□ -1.43
AP001042.1-201ENST00000416842 CLEC5AQ9NY25 188 aa6.1□□□□□ -1.43
AP001042.1-201ENST00000416842 TSSC4Q9Y5U2 329 aaPredicted RBP6.1□□□□□ -1.43
AP001042.1-201ENST00000416842 HELTA6NFD8 242 aa6.09□□□□□ -1.43
AP001042.1-201ENST00000416842 H3BTX0 84 aa6.09□□□□□ -1.43
AP001042.1-201ENST00000416842 DNASE2O00115 360 aaPredicted RBP6.09□□□□□ -1.43
AP001042.1-201ENST00000416842 PEX7O00628 323 aa6.09□□□□□ -1.43
AP001042.1-201ENST00000416842 TSPAN4O14817 238 aa6.09□□□□□ -1.43
AP001042.1-201ENST00000416842 ZNF207O43670 478 aaKnown RBP6.09□□□□□ -1.43
AP001042.1-201ENST00000416842 TCRAP04437 139 aa6.09□□□□□ -1.43
AP001042.1-201ENST00000416842 SNRPCP09234 159 aaKnown RBP6.09□□□□□ -1.43
AP001042.1-201ENST00000416842 RPL35P42766 123 aaKnown RBP6.09□□□□□ -1.43
AP001042.1-201ENST00000416842 GALR1P47211 349 aa6.09□□□□□ -1.43
AP001042.1-201ENST00000416842 RHEBQ15382 184 aa6.09□□□□□ -1.43
AP001042.1-201ENST00000416842 RPEL1Q2QD12 228 aa6.09□□□□□ -1.43
AP001042.1-201ENST00000416842 LINC01551Q86U37 167 aa6.09□□□□□ -1.43
AP001042.1-201ENST00000416842 EXOC3-AS1Q8N2X6 119 aa6.09□□□□□ -1.43
AP001042.1-201ENST00000416842 OR11H1Q8NG94 326 aa6.09□□□□□ -1.43
AP001042.1-201ENST00000416842 MRPL53Q96EL3 112 aaKnown RBP6.09□□□□□ -1.43
AP001042.1-201ENST00000416842 SMIM12Q96EX1 92 aa6.09□□□□□ -1.43
AP001042.1-201ENST00000416842 RAX2Q96IS3 184 aa6.09□□□□□ -1.43
AP001042.1-201ENST00000416842 LINC00479Q96M42 142 aa6.09□□□□□ -1.43
AP001042.1-201ENST00000416842 YPEL4Q96NS1 127 aa6.09□□□□□ -1.43
AP001042.1-201ENST00000416842 CITED2Q99967 270 aaPredicted RBP6.09□□□□□ -1.43
AP001042.1-201ENST00000416842 SMIM7Q9BQ49 75 aa6.09□□□□□ -1.43
AP001042.1-201ENST00000416842 NIPSNAP3BQ9BS92 247 aa6.09□□□□□ -1.43
AP001042.1-201ENST00000416842 ATG101Q9BSB4 218 aa6.09□□□□□ -1.43
AP001042.1-201ENST00000416842 C20orf24Q9BUV8 137 aa6.09□□□□□ -1.43
AP001042.1-201ENST00000416842 RHPN1-AS1Q9BWJ2 59 aa6.09□□□□□ -1.43
AP001042.1-201ENST00000416842 PPP1R14DQ9NXH3 145 aa6.09□□□□□ -1.43
AP001042.1-201ENST00000416842 SIGLEC8Q9NYZ4 499 aa6.09□□□□□ -1.43
AP001042.1-201ENST00000416842 PRELID1Q9Y255 219 aa6.09□□□□□ -1.43
AP001042.1-201ENST00000416842 COL7A1Q02388 2944 aa6.09□□□□□ -1.44
AP001042.1-201ENST00000416842 SERTM2A0A1B0GWG4 89 aa6.08□□□□□ -1.44
AP001042.1-201ENST00000416842 ZNF320A2RRD8 509 aa6.08□□□□□ -1.44
AP001042.1-201ENST00000416842 C2orf70A6NJV1 201 aa6.08□□□□□ -1.44
AP001042.1-201ENST00000416842 DIRC3C9JPN6 131 aa6.08□□□□□ -1.44
AP001042.1-201ENST00000416842 SCO1O75880 301 aa6.08□□□□□ -1.44
AP001042.1-201ENST00000416842 GCGP01275 180 aa6.08□□□□□ -1.44
AP001042.1-201ENST00000416842 CSN3P07498 182 aa6.08□□□□□ -1.44
AP001042.1-201ENST00000416842 CBLN1P23435 193 aa6.08□□□□□ -1.44
AP001042.1-201ENST00000416842 SYNJ2BPP57105 145 aa6.08□□□□□ -1.44
AP001042.1-201ENST00000416842 GRAMD2BQ96HH9 432 aa6.08□□□□□ -1.44
AP001042.1-201ENST00000416842 SLC50A1Q9BRV3 221 aa6.08□□□□□ -1.44
AP001042.1-201ENST00000416842 KRTAP17-1Q9BYP8 105 aa6.08□□□□□ -1.44
AP001042.1-201ENST00000416842 MLXQ9UH92 298 aa6.08□□□□□ -1.44
AP001042.1-201ENST00000416842 BIRC6Q9NR09 4857 aa6.08□□□□□ -1.44
AP001042.1-201ENST00000416842 IGHV3OR16-13A0A075B7E8 117 aa6.07□□□□□ -1.44
AP001042.1-201ENST00000416842 IGHV3-49A0A0A0MS15 119 aa6.07□□□□□ -1.44
AP001042.1-201ENST00000416842 IGHV3-74A0A0B4J1X5 117 aa6.07□□□□□ -1.44
AP001042.1-201ENST00000416842 IGHV3-66A0A0C4DH42 116 aa6.07□□□□□ -1.44
AP001042.1-201ENST00000416842 RBAKDNA6NC62 111 aa6.07□□□□□ -1.44
AP001042.1-201ENST00000416842 FBLL1A6NHQ2 334 aaKnown RBP6.07□□□□□ -1.44
AP001042.1-201ENST00000416842 K7EN84 100 aa6.07□□□□□ -1.44
AP001042.1-201ENST00000416842 CCL24O00175 119 aa6.07□□□□□ -1.44
AP001042.1-201ENST00000416842 ISLRO14498 428 aa6.07□□□□□ -1.44
AP001042.1-201ENST00000416842 LTAP01374 205 aa6.07□□□□□ -1.44
AP001042.1-201ENST00000416842 SLC25A5P05141 298 aaKnown RBP6.07□□□□□ -1.44
AP001042.1-201ENST00000416842 FOLR2P14207 255 aa6.07□□□□□ -1.44
AP001042.1-201ENST00000416842 ATF4P18848 351 aaPredicted RBP6.07□□□□□ -1.44
AP001042.1-201ENST00000416842 EDN2P20800 178 aa6.07□□□□□ -1.44
AP001042.1-201ENST00000416842 GNG5P63218 68 aa6.07□□□□□ -1.44
AP001042.1-201ENST00000416842 LCN12Q6JVE5 192 aa6.07□□□□□ -1.44
AP001042.1-201ENST00000416842 C8orf86Q6ZUL3 223 aa6.07□□□□□ -1.44
AP001042.1-201ENST00000416842 DCANP1Q8TF63 244 aa6.07□□□□□ -1.44
AP001042.1-201ENST00000416842 DLX4Q92988 240 aaPredicted RBP6.07□□□□□ -1.44
AP001042.1-201ENST00000416842 ISOC2Q96AB3 205 aa6.07□□□□□ -1.44
AP001042.1-201ENST00000416842 AURKAIP1Q9NWT8 199 aaPredicted RBP6.07□□□□□ -1.44
AP001042.1-201ENST00000416842 TRAV2A0A0B4J234 112 aa6.06□□□□□ -1.44
AP001042.1-201ENST00000416842 TRAV34A0A0B4J273 112 aa6.06□□□□□ -1.44
AP001042.1-201ENST00000416842 CXorf65A6NEN9 183 aa6.06□□□□□ -1.44
AP001042.1-201ENST00000416842 M0R3E3 92 aa6.06□□□□□ -1.44
AP001042.1-201ENST00000416842 CNN1P51911 297 aaKnown RBP6.06□□□□□ -1.44
AP001042.1-201ENST00000416842 CEBPGP53567 150 aa6.06□□□□□ -1.44
AP001042.1-201ENST00000416842 SLURP1P55000 103 aa6.06□□□□□ -1.44
AP001042.1-201ENST00000416842 PSG3Q16557 428 aa6.06□□□□□ -1.44
AP001042.1-201ENST00000416842 DEFB136Q30KP8 78 aa6.06□□□□□ -1.44
AP001042.1-201ENST00000416842 SAMD13Q5VXD3 122 aa6.06□□□□□ -1.44
AP001042.1-201ENST00000416842 BAGE2Q86Y30 109 aa6.06□□□□□ -1.44
AP001042.1-201ENST00000416842 NDUFA11Q86Y39 141 aa6.06□□□□□ -1.44
AP001042.1-201ENST00000416842 TMEM75Q8N9X5 138 aa6.06□□□□□ -1.44
AP001042.1-201ENST00000416842 KLHL30-AS1Q8NEE0 82 aa6.06□□□□□ -1.44
AP001042.1-201ENST00000416842 OR9G4Q8NGQ1 327 aa6.06□□□□□ -1.44
AP001042.1-201ENST00000416842 DPF1Q92782 380 aa6.06□□□□□ -1.44
AP001042.1-201ENST00000416842 FMC1Q96HJ9 113 aa6.06□□□□□ -1.44
AP001042.1-201ENST00000416842 C20orf173Q96LM9 149 aa6.06□□□□□ -1.44
AP001042.1-201ENST00000416842 CTDSP1Q9GZU7 261 aa6.06□□□□□ -1.44
AP001042.1-201ENST00000416842 NRN1Q9NPD7 142 aa6.06□□□□□ -1.44
AP001042.1-201ENST00000416842 ZFP30Q9Y2G7 519 aa6.06□□□□□ -1.44
AP001042.1-201ENST00000416842 PGPEP1LA6NFU8 196 aa6.05□□□□□ -1.44
AP001042.1-201ENST00000416842 COLCA2A8K830 154 aa6.05□□□□□ -1.44
AP001042.1-201ENST00000416842 PRAC2D3DTV9 90 aa6.05□□□□□ -1.44
AP001042.1-201ENST00000416842 K7EQG2 157 aa6.05□□□□□ -1.44
AP001042.1-201ENST00000416842 PFN1P07737 140 aaKnown RBP6.05□□□□□ -1.44
AP001042.1-201ENST00000416842 HLA-DMBP28068 263 aa6.05□□□□□ -1.44
AP001042.1-201ENST00000416842 BMI1P35226 326 aa6.05□□□□□ -1.44
AP001042.1-201ENST00000416842 AKR1C3P42330 323 aa6.05□□□□□ -1.44
AP001042.1-201ENST00000416842 BTN1A1Q13410 526 aa6.05□□□□□ -1.44
AP001042.1-201ENST00000416842 ZNF674Q2M3X9 581 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms