RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 ATP5G1P05496 136 aa12.4□□□□□ -0.42
PDLIM2-208ENST00000416159 HTN1P15515 57 aa12.4□□□□□ -0.42
PDLIM2-208ENST00000416159 ATP5G3P48201 142 aa12.4□□□□□ -0.42
PDLIM2-208ENST00000416159 BAXQ07812 192 aa12.4□□□□□ -0.42
PDLIM2-208ENST00000416159 FCN2Q15485 313 aa12.4□□□□□ -0.42
PDLIM2-208ENST00000416159 SLC39A9Q9NUM3 307 aa12.4□□□□□ -0.42
PDLIM2-208ENST00000416159 IGLV2-18A0A075B6J9 118 aa12.39□□□□□ -0.43
PDLIM2-208ENST00000416159 TRAV5A0A0B4J249 113 aa12.39□□□□□ -0.43
PDLIM2-208ENST00000416159 UBE2L5PA0A1B0GUS4 154 aa12.39□□□□□ -0.43
PDLIM2-208ENST00000416159 IGSF23A1L1A6 192 aa12.39□□□□□ -0.43
PDLIM2-208ENST00000416159 PRSS29PA6NIE9 313 aa12.39□□□□□ -0.43
PDLIM2-208ENST00000416159 F5H768 121 aa12.39□□□□□ -0.43
PDLIM2-208ENST00000416159 RTL8CO15255 209 aa12.39□□□□□ -0.43
PDLIM2-208ENST00000416159 FAM3BP58499 235 aaPredicted RBP12.39□□□□□ -0.43
PDLIM2-208ENST00000416159 ASAH1Q13510 395 aa12.39□□□□□ -0.43
PDLIM2-208ENST00000416159 Q6ZR54 194 aa12.39□□□□□ -0.43
PDLIM2-208ENST00000416159 NACAE9PAV3 2078 aa12.38□□□□□ -0.43
PDLIM2-208ENST00000416159 A0A1B0GVY2 172 aa12.38□□□□□ -0.43
PDLIM2-208ENST00000416159 PRAC2D3DTV9 90 aa12.38□□□□□ -0.43
PDLIM2-208ENST00000416159 ZNF253O75346 499 aa12.38□□□□□ -0.43
PDLIM2-208ENST00000416159 CCDC28AQ8IWP9 274 aa12.38□□□□□ -0.43
PDLIM2-208ENST00000416159 TMEM263Q8WUH6 116 aaKnown RBP12.38□□□□□ -0.43
PDLIM2-208ENST00000416159 GPN1Q9HCN4 374 aaPredicted RBP12.38□□□□□ -0.43
PDLIM2-208ENST00000416159 MPDU1O75352 247 aa12.37□□□□□ -0.43
PDLIM2-208ENST00000416159 FGF7P21781 194 aa12.37□□□□□ -0.43
PDLIM2-208ENST00000416159 KIR3DS1Q14943 382 aa12.37□□□□□ -0.43
PDLIM2-208ENST00000416159 RNASE8Q8TDE3 154 aaKnown RBP12.37□□□□□ -0.43
PDLIM2-208ENST00000416159 ODF3Q96PU9 254 aa12.37□□□□□ -0.43
PDLIM2-208ENST00000416159 ATG101Q9BSB4 218 aa12.37□□□□□ -0.43
PDLIM2-208ENST00000416159 PARD6GQ9BYG4 376 aaPredicted RBP12.37□□□□□ -0.43
PDLIM2-208ENST00000416159 NOP10Q9NPE3 64 aaKnown RBP12.37□□□□□ -0.43
PDLIM2-208ENST00000416159 ZNF586Q9NXT0 402 aa12.37□□□□□ -0.43
PDLIM2-208ENST00000416159 RLN2P04090 185 aa12.36□□□□□ -0.43
PDLIM2-208ENST00000416159 LEPP41159 167 aa12.36□□□□□ -0.43
PDLIM2-208ENST00000416159 SOHLH1Q5JUK2 328 aa12.36□□□□□ -0.43
PDLIM2-208ENST00000416159 GFI1BQ5VTD9 330 aa12.36□□□□□ -0.43
PDLIM2-208ENST00000416159 TMEM14CQ9P0S9 112 aa12.36□□□□□ -0.43
PDLIM2-208ENST00000416159 NPIPB6E9PJ23 425 aa12.35□□□□□ -0.43
PDLIM2-208ENST00000416159 CT45A10P0DMU9 189 aa12.35□□□□□ -0.43
PDLIM2-208ENST00000416159 HIST1H1EP10412 219 aaKnown RBP12.35□□□□□ -0.43
PDLIM2-208ENST00000416159 ENKURQ8TC29 256 aa12.35□□□□□ -0.43
PDLIM2-208ENST00000416159 MRPL53Q96EL3 112 aaKnown RBP12.35□□□□□ -0.43
PDLIM2-208ENST00000416159 HECTD4Q9Y4D8 3996 aa12.35□□□□□ -0.43
PDLIM2-208ENST00000416159 HERC2O95714 4834 aa12.34□□□□□ -0.43
PDLIM2-208ENST00000416159 TRBV19A0A075B6N1 114 aa12.34□□□□□ -0.43
PDLIM2-208ENST00000416159 NUDT3O95989 172 aa12.34□□□□□ -0.43
PDLIM2-208ENST00000416159 SLC25A31Q9H0C2 315 aa12.34□□□□□ -0.43
PDLIM2-208ENST00000416159 PRELID1Q9Y255 219 aa12.34□□□□□ -0.43
PDLIM2-208ENST00000416159 TIMM9Q9Y5J7 89 aa12.34□□□□□ -0.43
PDLIM2-208ENST00000416159 E5RGE8 158 aa12.33□□□□□ -0.44
PDLIM2-208ENST00000416159 J3KRW8 73 aa12.33□□□□□ -0.44
PDLIM2-208ENST00000416159 UPK1BO75841 260 aa12.33□□□□□ -0.44
PDLIM2-208ENST00000416159 NHLH2Q02577 135 aa12.33□□□□□ -0.44
PDLIM2-208ENST00000416159 PDE6HQ13956 83 aa12.33□□□□□ -0.44
PDLIM2-208ENST00000416159 NPCDR1Q9BY65 106 aa12.33□□□□□ -0.44
PDLIM2-208ENST00000416159 NMES1Q9C002 83 aa12.33□□□□□ -0.44
PDLIM2-208ENST00000416159 DNAH17Q9UFH2 4485 aa12.32□□□□□ -0.44
PDLIM2-208ENST00000416159 TRAV12-3A0A0B4J271 114 aa12.32□□□□□ -0.44
PDLIM2-208ENST00000416159 SNURFLB1AK76 121 aa12.32□□□□□ -0.44
PDLIM2-208ENST00000416159 PRAF2O60831 178 aa12.32□□□□□ -0.44
PDLIM2-208ENST00000416159 SIX6O95475 246 aa12.32□□□□□ -0.44
PDLIM2-208ENST00000416159 CCL18P55774 89 aa12.32□□□□□ -0.44
PDLIM2-208ENST00000416159 CYCSP99999 105 aaKnown RBP12.32□□□□□ -0.44
PDLIM2-208ENST00000416159 C1orf134Q5TEV5 83 aa12.32□□□□□ -0.44
PDLIM2-208ENST00000416159 LINC00612Q8N6U2 182 aa12.32□□□□□ -0.44
PDLIM2-208ENST00000416159 LINC00477Q96M19 166 aa12.32□□□□□ -0.44
PDLIM2-208ENST00000416159 PYGO2Q9BRQ0 406 aa12.32□□□□□ -0.44
PDLIM2-208ENST00000416159 M0R3E3 92 aa12.31□□□□□ -0.44
PDLIM2-208ENST00000416159 NDUFB4O95168 129 aa12.31□□□□□ -0.44
PDLIM2-208ENST00000416159 SLC25A5P05141 298 aaKnown RBP12.31□□□□□ -0.44
PDLIM2-208ENST00000416159 OR5C1Q8NGR4 320 aa12.31□□□□□ -0.44
PDLIM2-208ENST00000416159 RNF141Q8WVD5 230 aa12.31□□□□□ -0.44
PDLIM2-208ENST00000416159 AAMDCQ9H7C9 122 aa12.31□□□□□ -0.44
PDLIM2-208ENST00000416159 PYYP10082 97 aa12.3□□□□□ -0.44
PDLIM2-208ENST00000416159 ERCC8Q13216 396 aa12.3□□□□□ -0.44
PDLIM2-208ENST00000416159 GCSAMLQ5JQS6 135 aa12.3□□□□□ -0.44
PDLIM2-208ENST00000416159 THAP6Q8TBB0 222 aa12.3□□□□□ -0.44
PDLIM2-208ENST00000416159 BLNKQ8WV28 456 aa12.3□□□□□ -0.44
PDLIM2-208ENST00000416159 C7orf71A4D174 169 aa12.29□□□□□ -0.44
PDLIM2-208ENST00000416159 INMT-MINDY4F8WBC2 141 aa12.29□□□□□ -0.44
PDLIM2-208ENST00000416159 DAZ2Q13117 558 aaKnown RBP12.29□□□□□ -0.44
PDLIM2-208ENST00000416159 OR5I1Q13606 314 aa12.29□□□□□ -0.44
PDLIM2-208ENST00000416159 CLINT1Q14677 625 aa12.29□□□□□ -0.44
PDLIM2-208ENST00000416159 ZNRF2Q8NHG8 242 aa12.29□□□□□ -0.44
PDLIM2-208ENST00000416159 SLC25A2Q9BXI2 301 aa12.29□□□□□ -0.44
PDLIM2-208ENST00000416159 KCNIP2Q9NS61 270 aa12.29□□□□□ -0.44
PDLIM2-208ENST00000416159 OR5AC2Q9NZP5 309 aa12.29□□□□□ -0.44
PDLIM2-208ENST00000416159 FAT2Q9NYQ8 4349 aa12.28□□□□□ -0.44
PDLIM2-208ENST00000416159 GAGE12BA1L429 117 aa12.28□□□□□ -0.44
PDLIM2-208ENST00000416159 KLLNB2CW77 178 aa12.28□□□□□ -0.44
PDLIM2-208ENST00000416159 H0YIZ8 118 aa12.28□□□□□ -0.44
PDLIM2-208ENST00000416159 GAGE7O76087 117 aa12.28□□□□□ -0.44
PDLIM2-208ENST00000416159 NBEAP1P0C6P0 100 aa12.28□□□□□ -0.44
PDLIM2-208ENST00000416159 GAGE12FP0CL80 117 aa12.28□□□□□ -0.44
PDLIM2-208ENST00000416159 GAGE12GP0CL81 117 aa12.28□□□□□ -0.44
PDLIM2-208ENST00000416159 GAGE12IP0CL82 117 aa12.28□□□□□ -0.44
PDLIM2-208ENST00000416159 IFITM3Q01628 133 aa12.28□□□□□ -0.44
PDLIM2-208ENST00000416159 LRRC37A5PQ49AS3 106 aa12.28□□□□□ -0.44
PDLIM2-208ENST00000416159 MIR17HGQ75NE6 70 aa12.28□□□□□ -0.44
PDLIM2-208ENST00000416159 EXOC3-AS1Q8N2X6 119 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms