RNA–Protein interactions for RNA: ENST00000414368.2

LINC00343-201, long intergenic non-protein coding RNA 343, humanhuman

TSL 2

Gene LINC00343, Length 864 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-201ENST00000414368 KCNRGQ8N5I3 272 aa5.06□□□□□ -1.6
LINC00343-201ENST00000414368 OR1L4Q8NGR5 311 aa5.06□□□□□ -1.6
LINC00343-201ENST00000414368 PARD6GQ9BYG4 376 aaPredicted RBP5.06□□□□□ -1.6
LINC00343-201ENST00000414368 MAP6D1Q9H9H5 199 aa5.06□□□□□ -1.6
LINC00343-201ENST00000414368 NRN1Q9NPD7 142 aa5.06□□□□□ -1.6
LINC00343-201ENST00000414368 PPP1R14DQ9NXH3 145 aa5.06□□□□□ -1.6
LINC00343-201ENST00000414368 RBMY1BA6NDE4 496 aaKnown RBP5.05□□□□□ -1.6
LINC00343-201ENST00000414368 RBMY1EA6NEQ0 496 aaKnown RBP5.05□□□□□ -1.6
LINC00343-201ENST00000414368 MRPS12O15235 138 aaKnown RBP5.05□□□□□ -1.6
LINC00343-201ENST00000414368 C1QBP02746 253 aa5.05□□□□□ -1.6
LINC00343-201ENST00000414368 RBMY1DP0C7P1 496 aaKnown RBP5.05□□□□□ -1.6
LINC00343-201ENST00000414368 FRMD6-AS1P0C7T7 363 aa5.05□□□□□ -1.6
LINC00343-201ENST00000414368 RPL7P18124 248 aaKnown RBP5.05□□□□□ -1.6
LINC00343-201ENST00000414368 GALR1P47211 349 aa5.05□□□□□ -1.6
LINC00343-201ENST00000414368 RAB2AP61019 212 aa5.05□□□□□ -1.6
LINC00343-201ENST00000414368 ZNF266Q14584 549 aa5.05□□□□□ -1.6
LINC00343-201ENST00000414368 LGALSLQ3ZCW2 172 aaPredicted RBP5.05□□□□□ -1.6
LINC00343-201ENST00000414368 FAM78BQ5VT40 261 aa5.05□□□□□ -1.6
LINC00343-201ENST00000414368 TMUB2Q71RG4 321 aa5.05□□□□□ -1.6
LINC00343-201ENST00000414368 GATAD1Q8WUU5 269 aa5.05□□□□□ -1.6
LINC00343-201ENST00000414368 LINC00052Q96N35 136 aa5.05□□□□□ -1.6
LINC00343-201ENST00000414368 PFDN5Q99471 154 aa5.05□□□□□ -1.6
LINC00343-201ENST00000414368 ASCL2Q99929 193 aa5.05□□□□□ -1.6
LINC00343-201ENST00000414368 TUBA4BQ9H853 241 aa5.05□□□□□ -1.6
LINC00343-201ENST00000414368 SRD5A3Q9H8P0 318 aa5.05□□□□□ -1.6
LINC00343-201ENST00000414368 BORCS7-ASMTA0A0B4J1R7 106 aa5.04□□□□□ -1.6
LINC00343-201ENST00000414368 TRAV2A0A0B4J234 112 aa5.04□□□□□ -1.6
LINC00343-201ENST00000414368 TRAV8-2A0A0B4J237 113 aa5.04□□□□□ -1.6
LINC00343-201ENST00000414368 A0A0D9SG52 128 aa5.04□□□□□ -1.6
LINC00343-201ENST00000414368 GAGE10A6NGK3 116 aa5.04□□□□□ -1.6
LINC00343-201ENST00000414368 KNCNA6PVL3 124 aa5.04□□□□□ -1.6
LINC00343-201ENST00000414368 H3BQ15 152 aa5.04□□□□□ -1.6
LINC00343-201ENST00000414368 SOCS3O14543 225 aa5.04□□□□□ -1.6
LINC00343-201ENST00000414368 TAAR5O14804 337 aa5.04□□□□□ -1.6
LINC00343-201ENST00000414368 HMGB3O15347 200 aaKnown RBP5.04□□□□□ -1.6
LINC00343-201ENST00000414368 PYYP10082 97 aa5.04□□□□□ -1.6
LINC00343-201ENST00000414368 RPL35AP18077 110 aaKnown RBP5.04□□□□□ -1.6
LINC00343-201ENST00000414368 HLA-DMBP28068 263 aa5.04□□□□□ -1.6
LINC00343-201ENST00000414368 S100A7P31151 101 aa5.04□□□□□ -1.6
LINC00343-201ENST00000414368 ZNF345Q14585 488 aa5.04□□□□□ -1.6
LINC00343-201ENST00000414368 PSMG4Q5JS54 123 aa5.04□□□□□ -1.6
LINC00343-201ENST00000414368 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.04□□□□□ -1.6
LINC00343-201ENST00000414368 S100A7AQ86SG5 101 aa5.04□□□□□ -1.6
LINC00343-201ENST00000414368 SBSPONQ8IVN8 264 aa5.04□□□□□ -1.6
LINC00343-201ENST00000414368 RNF182Q8N6D2 247 aa5.04□□□□□ -1.6
LINC00343-201ENST00000414368 FAM167A-AS1Q96KT0 104 aa5.04□□□□□ -1.6
LINC00343-201ENST00000414368 GPR82Q96P67 336 aa5.04□□□□□ -1.6
LINC00343-201ENST00000414368 SLC25A2Q9BXI2 301 aa5.04□□□□□ -1.6
LINC00343-201ENST00000414368 KCNIP2Q9NS61 270 aa5.04□□□□□ -1.6
LINC00343-201ENST00000414368 TIMM9Q9Y5J7 89 aa5.04□□□□□ -1.6
LINC00343-201ENST00000414368 HUWE1Q7Z6Z7 4374 aaKnown RBP5.04□□□□□ -1.6
LINC00343-201ENST00000414368 KANTRA0A1W2PQU2 76 aa5.03□□□□□ -1.6
LINC00343-201ENST00000414368 F6UB75 175 aa5.03□□□□□ -1.6
LINC00343-201ENST00000414368 SLC17A3O00476 420 aa5.03□□□□□ -1.6
LINC00343-201ENST00000414368 BCL2L11O43521 198 aa5.03□□□□□ -1.6
LINC00343-201ENST00000414368 PFDN1O60925 122 aa5.03□□□□□ -1.6
LINC00343-201ENST00000414368 OR10J4P0C629 311 aa5.03□□□□□ -1.6
LINC00343-201ENST00000414368 IGLC2P0DOY2 106 aa5.03□□□□□ -1.6
LINC00343-201ENST00000414368 M6PRP20645 277 aa5.03□□□□□ -1.6
LINC00343-201ENST00000414368 ID1P41134 155 aa5.03□□□□□ -1.6
LINC00343-201ENST00000414368 NKX2-5P52952 324 aaPredicted RBP5.03□□□□□ -1.6
LINC00343-201ENST00000414368 ACOT6Q3I5F7 207 aaPredicted RBP5.03□□□□□ -1.6
LINC00343-201ENST00000414368 ACTL10Q5JWF8 245 aa5.03□□□□□ -1.6
LINC00343-201ENST00000414368 GDF5OSQ5U4N7 250 aa5.03□□□□□ -1.6
LINC00343-201ENST00000414368 FAM122CQ6P4D5 195 aa5.03□□□□□ -1.6
LINC00343-201ENST00000414368 LINC00322Q6ZN03 302 aaPredicted RBP5.03□□□□□ -1.6
LINC00343-201ENST00000414368 BPIFA4PQ86YQ2 179 aa5.03□□□□□ -1.6
LINC00343-201ENST00000414368 RPP25LQ8N5L8 163 aaKnown RBP5.03□□□□□ -1.6
LINC00343-201ENST00000414368 OR10G4Q8NGN3 311 aa5.03□□□□□ -1.6
LINC00343-201ENST00000414368 OR10G9Q8NGN4 311 aa5.03□□□□□ -1.6
LINC00343-201ENST00000414368 OR10G7Q8NGN6 311 aa5.03□□□□□ -1.6
LINC00343-201ENST00000414368 OR2G3Q8NGZ4 309 aa5.03□□□□□ -1.6
LINC00343-201ENST00000414368 HYLS1Q96M11 299 aa5.03□□□□□ -1.6
LINC00343-201ENST00000414368 PSMG3Q9BT73 122 aaPredicted RBP5.03□□□□□ -1.6
LINC00343-201ENST00000414368 ZNF471Q9BX82 626 aaPredicted RBP5.03□□□□□ -1.6
LINC00343-201ENST00000414368 HRH4Q9H3N8 390 aa5.03□□□□□ -1.6
LINC00343-201ENST00000414368 RPRMQ9NS64 109 aa5.03□□□□□ -1.6
LINC00343-201ENST00000414368 ZNF586Q9NXT0 402 aa5.03□□□□□ -1.6
LINC00343-201ENST00000414368 FUT9Q9Y231 359 aa5.03□□□□□ -1.6
LINC00343-201ENST00000414368 A0A087X0K7 114 aa5.02□□□□□ -1.61
LINC00343-201ENST00000414368 A0A0A0MQY5 61 aa5.02□□□□□ -1.61
LINC00343-201ENST00000414368 A0A1W2PPV4 95 aa5.02□□□□□ -1.61
LINC00343-201ENST00000414368 ZNF705FA8MVS1 300 aaPredicted RBP5.02□□□□□ -1.61
LINC00343-201ENST00000414368 A8MZ25 164 aa5.02□□□□□ -1.61
LINC00343-201ENST00000414368 ISLRO14498 428 aa5.02□□□□□ -1.61
LINC00343-201ENST00000414368 ZNF705DP0CH99 300 aaPredicted RBP5.02□□□□□ -1.61
LINC00343-201ENST00000414368 ZNF705BP0CI00 300 aaPredicted RBP5.02□□□□□ -1.61
LINC00343-201ENST00000414368 PSMB3P49720 205 aa5.02□□□□□ -1.61
LINC00343-201ENST00000414368 CMC4P56277 68 aaPredicted RBP5.02□□□□□ -1.61
LINC00343-201ENST00000414368 SNRPD3P62318 126 aaKnown RBP5.02□□□□□ -1.61
LINC00343-201ENST00000414368 RHOBP62745 196 aa5.02□□□□□ -1.61
LINC00343-201ENST00000414368 SERF2P84101 59 aa5.02□□□□□ -1.61
LINC00343-201ENST00000414368 HAGHQ16775 308 aa5.02□□□□□ -1.61
LINC00343-201ENST00000414368 ZFP69Q49AA0 526 aa5.02□□□□□ -1.61
LINC00343-201ENST00000414368 PIK3CD-AS1Q5SR53 167 aa5.02□□□□□ -1.61
LINC00343-201ENST00000414368 SSX7Q7RTT5 188 aa5.02□□□□□ -1.61
LINC00343-201ENST00000414368 C9orf62Q8N4C0 152 aa5.02□□□□□ -1.61
LINC00343-201ENST00000414368 LRRC20Q8TCA0 184 aa5.02□□□□□ -1.61
LINC00343-201ENST00000414368 NTN5Q8WTR8 489 aaPredicted RBP5.02□□□□□ -1.61
LINC00343-201ENST00000414368 BLNKQ8WV28 456 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms