RNA–Protein interactions for RNA: ENST00000414301.5

SEMA3F-203, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 936 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-203ENST00000414301 S100A10P60903 97 aa11.29□□□□□ -0.6
SEMA3F-203ENST00000414301 CCDC28AQ8IWP9 274 aa11.29□□□□□ -0.6
SEMA3F-203ENST00000414301 SAT2Q96F10 170 aaPredicted RBP11.29□□□□□ -0.6
SEMA3F-203ENST00000414301 PFDN5Q99471 154 aa11.29□□□□□ -0.6
SEMA3F-203ENST00000414301 C20orf144Q9BQM9 153 aa11.29□□□□□ -0.6
SEMA3F-203ENST00000414301 CCDC32Q9BV29 185 aa11.29□□□□□ -0.6
SEMA3F-203ENST00000414301 C11orf1Q9H5F2 150 aa11.29□□□□□ -0.6
SEMA3F-203ENST00000414301 NOP10Q9NPE3 64 aaKnown RBP11.29□□□□□ -0.6
SEMA3F-203ENST00000414301 KIAA1109Q2LD37 5005 aa11.29□□□□□ -0.6
SEMA3F-203ENST00000414301 SLC17A3O00476 420 aa11.28□□□□□ -0.6
SEMA3F-203ENST00000414301 RPL29P47914 159 aaKnown RBP11.28□□□□□ -0.6
SEMA3F-203ENST00000414301 KIR3DS1Q14943 382 aa11.28□□□□□ -0.6
SEMA3F-203ENST00000414301 C1orf134Q5TEV5 83 aa11.28□□□□□ -0.6
SEMA3F-203ENST00000414301 MZT2BQ6NZ67 158 aa11.28□□□□□ -0.6
SEMA3F-203ENST00000414301 STX12Q86Y82 276 aa11.28□□□□□ -0.6
SEMA3F-203ENST00000414301 TMEM252Q8N6L7 170 aa11.28□□□□□ -0.6
SEMA3F-203ENST00000414301 PARD6GQ9BYG4 376 aaPredicted RBP11.28□□□□□ -0.6
SEMA3F-203ENST00000414301 KRTAP17-1Q9BYP8 105 aa11.28□□□□□ -0.6
SEMA3F-203ENST00000414301 LYRM2Q9NU23 88 aaPredicted RBP11.28□□□□□ -0.6
SEMA3F-203ENST00000414301 SLC39A9Q9NUM3 307 aa11.28□□□□□ -0.6
SEMA3F-203ENST00000414301 HBG1P69891 147 aa11.27□□□□□ -0.61
SEMA3F-203ENST00000414301 HBG2P69892 147 aa11.27□□□□□ -0.61
SEMA3F-203ENST00000414301 BAXQ07812 192 aa11.27□□□□□ -0.61
SEMA3F-203ENST00000414301 IL15RAQ13261 267 aa11.27□□□□□ -0.61
SEMA3F-203ENST00000414301 RAB32Q13637 225 aa11.27□□□□□ -0.61
SEMA3F-203ENST00000414301 ATP6V1FQ16864 119 aa11.27□□□□□ -0.61
SEMA3F-203ENST00000414301 VWC2Q2TAL6 325 aa11.27□□□□□ -0.61
SEMA3F-203ENST00000414301 TMEM263Q8WUH6 116 aaKnown RBP11.27□□□□□ -0.61
SEMA3F-203ENST00000414301 UBE2L5PA0A1B0GUS4 154 aa11.26□□□□□ -0.61
SEMA3F-203ENST00000414301 IGSF23A1L1A6 192 aa11.26□□□□□ -0.61
SEMA3F-203ENST00000414301 CT45A10P0DMU9 189 aa11.26□□□□□ -0.61
SEMA3F-203ENST00000414301 CCL18P55774 89 aa11.26□□□□□ -0.61
SEMA3F-203ENST00000414301 GFI1BQ5VTD9 330 aa11.26□□□□□ -0.61
SEMA3F-203ENST00000414301 RNASE8Q8TDE3 154 aaKnown RBP11.26□□□□□ -0.61
SEMA3F-203ENST00000414301 CHAC2Q8WUX2 184 aa11.26□□□□□ -0.61
SEMA3F-203ENST00000414301 ZNF586Q9NXT0 402 aa11.26□□□□□ -0.61
SEMA3F-203ENST00000414301 J3KRW8 73 aa11.25□□□□□ -0.61
SEMA3F-203ENST00000414301 FGF7P21781 194 aa11.25□□□□□ -0.61
SEMA3F-203ENST00000414301 LEPP41159 167 aa11.25□□□□□ -0.61
SEMA3F-203ENST00000414301 GPN1Q9HCN4 374 aaPredicted RBP11.25□□□□□ -0.61
SEMA3F-203ENST00000414301 TRAV12-3A0A0B4J271 114 aa11.24□□□□□ -0.61
SEMA3F-203ENST00000414301 ZNF253O75346 499 aa11.24□□□□□ -0.61
SEMA3F-203ENST00000414301 OR5I1Q13606 314 aa11.24□□□□□ -0.61
SEMA3F-203ENST00000414301 LINC00299Q6ZSB3 139 aa11.24□□□□□ -0.61
SEMA3F-203ENST00000414301 ODF3Q96PU9 254 aa11.24□□□□□ -0.61
SEMA3F-203ENST00000414301 TIMM9Q9Y5J7 89 aa11.24□□□□□ -0.61
SEMA3F-203ENST00000414301 TRBV19A0A075B6N1 114 aa11.23□□□□□ -0.61
SEMA3F-203ENST00000414301 SNURFLB1AK76 121 aa11.23□□□□□ -0.61
SEMA3F-203ENST00000414301 NPIPB6E9PJ23 425 aa11.23□□□□□ -0.61
SEMA3F-203ENST00000414301 MPDU1O75352 247 aa11.23□□□□□ -0.61
SEMA3F-203ENST00000414301 RLN2P04090 185 aa11.23□□□□□ -0.61
SEMA3F-203ENST00000414301 MED14OSP0DP75 135 aa11.23□□□□□ -0.61
SEMA3F-203ENST00000414301 HIST1H1EP10412 219 aaKnown RBP11.23□□□□□ -0.61
SEMA3F-203ENST00000414301 CLINT1Q14677 625 aa11.23□□□□□ -0.61
SEMA3F-203ENST00000414301 RNF141Q8WVD5 230 aa11.23□□□□□ -0.61
SEMA3F-203ENST00000414301 S100ZQ8WXG8 99 aa11.23□□□□□ -0.61
SEMA3F-203ENST00000414301 TMEM14CQ9P0S9 112 aa11.23□□□□□ -0.61
SEMA3F-203ENST00000414301 GAGE12BA1L429 117 aa11.22□□□□□ -0.61
SEMA3F-203ENST00000414301 GAGE7O76087 117 aa11.22□□□□□ -0.61
SEMA3F-203ENST00000414301 GAGE12FP0CL80 117 aa11.22□□□□□ -0.61
SEMA3F-203ENST00000414301 GAGE12GP0CL81 117 aa11.22□□□□□ -0.61
SEMA3F-203ENST00000414301 GAGE12IP0CL82 117 aa11.22□□□□□ -0.61
SEMA3F-203ENST00000414301 ASAH1Q13510 395 aa11.22□□□□□ -0.61
SEMA3F-203ENST00000414301 ZNRF2Q8NHG8 242 aa11.22□□□□□ -0.61
SEMA3F-203ENST00000414301 MRPL53Q96EL3 112 aaKnown RBP11.22□□□□□ -0.61
SEMA3F-203ENST00000414301 PYGO2Q9BRQ0 406 aa11.22□□□□□ -0.61
SEMA3F-203ENST00000414301 PRELID1Q9Y255 219 aa11.22□□□□□ -0.61
SEMA3F-203ENST00000414301 PKD1P98161 4303 aa11.22□□□□□ -0.61
SEMA3F-203ENST00000414301 PKHD1P08F94 4074 aa11.22□□□□□ -0.61
SEMA3F-203ENST00000414301 NBDYA0A0U1RRE5 68 aa11.21□□□□□ -0.61
SEMA3F-203ENST00000414301 M0R3E3 92 aa11.21□□□□□ -0.61
SEMA3F-203ENST00000414301 NHLH2Q02577 135 aa11.21□□□□□ -0.61
SEMA3F-203ENST00000414301 ERCC8Q13216 396 aa11.21□□□□□ -0.61
SEMA3F-203ENST00000414301 LINC00612Q8N6U2 182 aa11.21□□□□□ -0.61
SEMA3F-203ENST00000414301 BLNKQ8WV28 456 aa11.21□□□□□ -0.61
SEMA3F-203ENST00000414301 GNPNAT1Q96EK6 184 aaPredicted RBP11.21□□□□□ -0.61
SEMA3F-203ENST00000414301 LINC00477Q96M19 166 aa11.21□□□□□ -0.61
SEMA3F-203ENST00000414301 NPCDR1Q9BY65 106 aa11.21□□□□□ -0.61
SEMA3F-203ENST00000414301 SLC25A31Q9H0C2 315 aa11.21□□□□□ -0.61
SEMA3F-203ENST00000414301 LINC00588Q9Y4M8 146 aa11.21□□□□□ -0.61
SEMA3F-203ENST00000414301 DYNC1H1Q14204 4646 aaKnown RBP11.2□□□□□ -0.62
SEMA3F-203ENST00000414301 TRAV26-1A0A087WT03 109 aa11.2□□□□□ -0.62
SEMA3F-203ENST00000414301 NDUFB4O95168 129 aa11.2□□□□□ -0.62
SEMA3F-203ENST00000414301 SIX6O95475 246 aa11.2□□□□□ -0.62
SEMA3F-203ENST00000414301 SLC25A5P05141 298 aaKnown RBP11.2□□□□□ -0.62
SEMA3F-203ENST00000414301 PYYP10082 97 aa11.2□□□□□ -0.62
SEMA3F-203ENST00000414301 PDE6HQ13956 83 aa11.2□□□□□ -0.62
SEMA3F-203ENST00000414301 GCSAMLQ5JQS6 135 aa11.2□□□□□ -0.62
SEMA3F-203ENST00000414301 OR5C1Q8NGR4 320 aa11.2□□□□□ -0.62
SEMA3F-203ENST00000414301 THAP6Q8TBB0 222 aa11.2□□□□□ -0.62
SEMA3F-203ENST00000414301 ENKURQ8TC29 256 aa11.2□□□□□ -0.62
SEMA3F-203ENST00000414301 AGPAT4-IT1Q9H0P7 198 aa11.2□□□□□ -0.62
SEMA3F-203ENST00000414301 A0A0J9YY99 117 aa11.19□□□□□ -0.62
SEMA3F-203ENST00000414301 E5RGE8 158 aa11.19□□□□□ -0.62
SEMA3F-203ENST00000414301 M6PRP20645 277 aa11.19□□□□□ -0.62
SEMA3F-203ENST00000414301 SSX7Q7RTT5 188 aa11.19□□□□□ -0.62
SEMA3F-203ENST00000414301 EXOC3-AS1Q8N2X6 119 aa11.19□□□□□ -0.62
SEMA3F-203ENST00000414301 RXFP4Q8TDU9 374 aa11.19□□□□□ -0.62
SEMA3F-203ENST00000414301 AAMDCQ9H7C9 122 aa11.19□□□□□ -0.62
SEMA3F-203ENST00000414301 DNAH11Q96DT5 4516 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms