RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 C16orf54Q6UWD8 224 aa11.45□□□□□ -0.58
SEMA3F-202ENST00000413852 ZNF491Q8N8L2 437 aa11.45□□□□□ -0.58
SEMA3F-202ENST00000413852 PTPRZ1P23471 2315 aaPredicted RBP11.45□□□□□ -0.58
SEMA3F-202ENST00000413852 IGKV2D-26A0A0A0MRZ7 120 aa11.45□□□□□ -0.58
SEMA3F-202ENST00000413852 TNFRSF13BO14836 293 aaPredicted RBP11.45□□□□□ -0.58
SEMA3F-202ENST00000413852 KLRD1Q13241 179 aa11.45□□□□□ -0.58
SEMA3F-202ENST00000413852 FAM71F2Q6NXP2 309 aa11.45□□□□□ -0.58
SEMA3F-202ENST00000413852 RNASE6Q93091 150 aaKnown RBP11.45□□□□□ -0.58
SEMA3F-202ENST00000413852 SMIM12Q96EX1 92 aa11.45□□□□□ -0.58
SEMA3F-202ENST00000413852 ZNF414Q96IQ9 312 aa11.45□□□□□ -0.58
SEMA3F-202ENST00000413852 TWIST1Q15672 202 aa11.45□□□□□ -0.58
SEMA3F-202ENST00000413852 VGLL1Q99990 258 aa11.45□□□□□ -0.58
SEMA3F-202ENST00000413852 IGHV3OR16-13A0A075B7E8 117 aa11.44□□□□□ -0.58
SEMA3F-202ENST00000413852 IGHV3-74A0A0B4J1X5 117 aa11.44□□□□□ -0.58
SEMA3F-202ENST00000413852 BUB1B-PAK6H3BSN5 160 aa11.44□□□□□ -0.58
SEMA3F-202ENST00000413852 TIMM23O14925 209 aa11.44□□□□□ -0.58
SEMA3F-202ENST00000413852 EGR2P11161 476 aaPredicted RBP11.44□□□□□ -0.58
SEMA3F-202ENST00000413852 FER1L6-AS1Q8NA97 138 aa11.44□□□□□ -0.58
SEMA3F-202ENST00000413852 RPEQ96AT9 228 aa11.44□□□□□ -0.58
SEMA3F-202ENST00000413852 RNF125Q96EQ8 232 aa11.44□□□□□ -0.58
SEMA3F-202ENST00000413852 SHANK2-AS3Q9BTD1 123 aa11.44□□□□□ -0.58
SEMA3F-202ENST00000413852 HRNRQ86YZ3 2850 aaPredicted RBP11.44□□□□□ -0.58
SEMA3F-202ENST00000413852 IGHV3-66A0A0C4DH42 116 aa11.44□□□□□ -0.58
SEMA3F-202ENST00000413852 TMEM189A5PLL7 270 aa11.44□□□□□ -0.58
SEMA3F-202ENST00000413852 E7EQL1 145 aa11.44□□□□□ -0.58
SEMA3F-202ENST00000413852 HOXB4P17483 251 aaPredicted RBP11.44□□□□□ -0.58
SEMA3F-202ENST00000413852 LINC00311Q8N616 119 aa11.44□□□□□ -0.58
SEMA3F-202ENST00000413852 AP1S3Q96PC3 154 aa11.44□□□□□ -0.58
SEMA3F-202ENST00000413852 ONECUT1Q9UBC0 465 aa11.44□□□□□ -0.58
SEMA3F-202ENST00000413852 PLP1P60201 277 aa11.43□□□□□ -0.58
SEMA3F-202ENST00000413852 PRR30Q53SZ7 412 aaPredicted RBP11.43□□□□□ -0.58
SEMA3F-202ENST00000413852 CSTL1Q9H114 145 aa11.43□□□□□ -0.58
SEMA3F-202ENST00000413852 SPRY2O43597 315 aa11.43□□□□□ -0.58
SEMA3F-202ENST00000413852 APOBEC3AP31941 199 aaPredicted RBP11.43□□□□□ -0.58
SEMA3F-202ENST00000413852 ERCC8Q13216 396 aa11.43□□□□□ -0.58
SEMA3F-202ENST00000413852 TMEM30BQ3MIR4 351 aa11.43□□□□□ -0.58
SEMA3F-202ENST00000413852 Q6ZQT7 251 aa11.43□□□□□ -0.58
SEMA3F-202ENST00000413852 NUP37Q8NFH4 326 aa11.43□□□□□ -0.58
SEMA3F-202ENST00000413852 SPTBN1Q01082 2364 aaKnown RBP11.43□□□□□ -0.58
SEMA3F-202ENST00000413852 A0A0G2JLM5 398 aa11.43□□□□□ -0.58
SEMA3F-202ENST00000413852 H3BRN7 92 aa11.43□□□□□ -0.58
SEMA3F-202ENST00000413852 IGLV1-47P01700 117 aa11.43□□□□□ -0.58
SEMA3F-202ENST00000413852 CKS2P33552 79 aa11.43□□□□□ -0.58
SEMA3F-202ENST00000413852 SCNM1Q9BWG6 230 aa11.43□□□□□ -0.58
SEMA3F-202ENST00000413852 HES1Q14469 280 aa11.42□□□□□ -0.58
SEMA3F-202ENST00000413852 FAM104BQ5XKR9 115 aa11.42□□□□□ -0.58
SEMA3F-202ENST00000413852 ARL6IP6Q8N6S5 226 aa11.42□□□□□ -0.58
SEMA3F-202ENST00000413852 CT45A10P0DMU9 189 aa11.42□□□□□ -0.58
SEMA3F-202ENST00000413852 TMEM11P17152 192 aa11.42□□□□□ -0.58
SEMA3F-202ENST00000413852 PVRIGQ6DKI7 326 aa11.42□□□□□ -0.58
SEMA3F-202ENST00000413852 MTURNQ8N3F0 131 aa11.42□□□□□ -0.58
SEMA3F-202ENST00000413852 A1L4Q6 167 aa11.41□□□□□ -0.58
SEMA3F-202ENST00000413852 SMAD7O15105 426 aaKnown RBP11.41□□□□□ -0.58
SEMA3F-202ENST00000413852 NDUFS7O75251 213 aa11.41□□□□□ -0.58
SEMA3F-202ENST00000413852 GCSHP23434 173 aa11.41□□□□□ -0.58
SEMA3F-202ENST00000413852 GFRALQ6UXV0 394 aa11.41□□□□□ -0.58
SEMA3F-202ENST00000413852 C9orf118A6NHY6 69 aa11.41□□□□□ -0.58
SEMA3F-202ENST00000413852 MRPS12O15235 138 aaKnown RBP11.41□□□□□ -0.58
SEMA3F-202ENST00000413852 RBPJQ06330 500 aa11.41□□□□□ -0.58
SEMA3F-202ENST00000413852 UFSP1Q6NVU6 142 aa11.41□□□□□ -0.58
SEMA3F-202ENST00000413852 IFI27L1Q96BM0 104 aa11.41□□□□□ -0.58
SEMA3F-202ENST00000413852 TMEM14CQ9P0S9 112 aa11.41□□□□□ -0.58
SEMA3F-202ENST00000413852 ORMDL3Q8N138 153 aa11.41□□□□□ -0.58
SEMA3F-202ENST00000413852 IGHV3-49A0A0A0MS15 119 aa11.4□□□□□ -0.58
SEMA3F-202ENST00000413852 FXYD2P54710 66 aa11.4□□□□□ -0.58
SEMA3F-202ENST00000413852 ADAMTSL5Q6ZMM2 481 aa11.4□□□□□ -0.58
SEMA3F-202ENST00000413852 ZNF575Q86XF7 245 aa11.4□□□□□ -0.58
SEMA3F-202ENST00000413852 BOD1L2Q8IYS8 172 aa11.4□□□□□ -0.58
SEMA3F-202ENST00000413852 FAM57AQ8TBR7 257 aa11.4□□□□□ -0.58
SEMA3F-202ENST00000413852 GNG7O60262 68 aa11.4□□□□□ -0.58
SEMA3F-202ENST00000413852 ORM1P02763 201 aa11.4□□□□□ -0.58
SEMA3F-202ENST00000413852 GTSCR1Q86UQ5 136 aa11.4□□□□□ -0.58
SEMA3F-202ENST00000413852 RNF182Q8N6D2 247 aa11.4□□□□□ -0.58
SEMA3F-202ENST00000413852 ABHD17AQ96GS6 310 aa11.4□□□□□ -0.58
SEMA3F-202ENST00000413852 PPIAL4CA0A0B4J2A2 164 aa11.39□□□□□ -0.59
SEMA3F-202ENST00000413852 PPIAL4GP0DN37 164 aa11.39□□□□□ -0.59
SEMA3F-202ENST00000413852 Q6ZS92 163 aa11.39□□□□□ -0.59
SEMA3F-202ENST00000413852 SMIM15Q7Z3B0 74 aa11.39□□□□□ -0.59
SEMA3F-202ENST00000413852 PRAC2D3DTV9 90 aa11.39□□□□□ -0.59
SEMA3F-202ENST00000413852 K7ERU9 68 aa11.39□□□□□ -0.59
SEMA3F-202ENST00000413852 OR2K2Q8NGT1 345 aa11.39□□□□□ -0.59
SEMA3F-202ENST00000413852 DEFB104AQ8WTQ1 72 aa11.39□□□□□ -0.59
SEMA3F-202ENST00000413852 SHISA9B4DS77 424 aa11.39□□□□□ -0.59
SEMA3F-202ENST00000413852 K7EQM0 130 aa11.39□□□□□ -0.59
SEMA3F-202ENST00000413852 NDPQ00604 133 aa11.39□□□□□ -0.59
SEMA3F-202ENST00000413852 LINC01560Q8TB33 94 aa11.39□□□□□ -0.59
SEMA3F-202ENST00000413852 SPCS1Q9Y6A9 102 aa11.39□□□□□ -0.59
SEMA3F-202ENST00000413852 TRAV26-2A0A0B4J265 109 aa11.38□□□□□ -0.59
SEMA3F-202ENST00000413852 WI2-2373I1.2A0A1W2PRP0 233 aa11.38□□□□□ -0.59
SEMA3F-202ENST00000413852 HBDP02042 147 aa11.38□□□□□ -0.59
SEMA3F-202ENST00000413852 LCNL1Q6ZST4 164 aa11.38□□□□□ -0.59
SEMA3F-202ENST00000413852 OR1N2Q8NGR9 330 aa11.38□□□□□ -0.59
SEMA3F-202ENST00000413852 CEACAM4O75871 244 aa11.38□□□□□ -0.59
SEMA3F-202ENST00000413852 GRNP28799 593 aaKnown RBP11.38□□□□□ -0.59
SEMA3F-202ENST00000413852 LEPP41159 167 aa11.38□□□□□ -0.59
SEMA3F-202ENST00000413852 RPL24P83731 157 aaKnown RBP11.38□□□□□ -0.59
SEMA3F-202ENST00000413852 ATRXP46100 2492 aa11.38□□□□□ -0.59
SEMA3F-202ENST00000413852 SEC11AP67812 179 aa11.37□□□□□ -0.59
SEMA3F-202ENST00000413852 H3BRM9 83 aa11.37□□□□□ -0.59
SEMA3F-202ENST00000413852 K7EP34 96 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms