RNA–Protein interactions for RNA: ENST00000413354.5

MCF2L-211, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-211ENST00000413354 TSPOP30536 169 aa11.23□□□□□ -0.61
MCF2L-211ENST00000413354 PDE6HQ13956 83 aa11.23□□□□□ -0.61
MCF2L-211ENST00000413354 OXA1LQ15070 435 aa11.23□□□□□ -0.61
MCF2L-211ENST00000413354 MRPL53Q96EL3 112 aaKnown RBP11.23□□□□□ -0.61
MCF2L-211ENST00000413354 ATP5SQ99766 215 aa11.23□□□□□ -0.61
MCF2L-211ENST00000413354 WDR61Q9GZS3 305 aaKnown RBP11.23□□□□□ -0.61
MCF2L-211ENST00000413354 HSPB11Q9Y547 144 aa11.23□□□□□ -0.61
MCF2L-211ENST00000413354 YTHDF2Q9Y5A9 579 aaKnown RBP11.23□□□□□ -0.61
MCF2L-211ENST00000413354 TRAV12-2A0A075B6T6 113 aa11.22□□□□□ -0.61
MCF2L-211ENST00000413354 HIST1H1EP10412 219 aaKnown RBP11.22□□□□□ -0.61
MCF2L-211ENST00000413354 C20orf144Q9BQM9 153 aa11.22□□□□□ -0.61
MCF2L-211ENST00000413354 MRPL32Q9BYC8 188 aaKnown RBP11.22□□□□□ -0.61
MCF2L-211ENST00000413354 ZNF586Q9NXT0 402 aa11.22□□□□□ -0.61
MCF2L-211ENST00000413354 PRELID1Q9Y255 219 aa11.22□□□□□ -0.61
MCF2L-211ENST00000413354 TRBV19A0A075B6N1 114 aa11.21□□□□□ -0.61
MCF2L-211ENST00000413354 LYRM9A8MSI8 78 aa11.21□□□□□ -0.61
MCF2L-211ENST00000413354 FAM210BQ96KR6 192 aa11.21□□□□□ -0.61
MCF2L-211ENST00000413354 ODF3Q96PU9 254 aa11.21□□□□□ -0.61
MCF2L-211ENST00000413354 NDUFAF3Q9BU61 184 aa11.21□□□□□ -0.61
MCF2L-211ENST00000413354 MBD2Q9UBB5 411 aa11.21□□□□□ -0.61
MCF2L-211ENST00000413354 TIMM9Q9Y5J7 89 aa11.21□□□□□ -0.61
MCF2L-211ENST00000413354 ZNF705GA8MUZ8 300 aaPredicted RBP11.2□□□□□ -0.62
MCF2L-211ENST00000413354 IFNA5P01569 189 aa11.2□□□□□ -0.62
MCF2L-211ENST00000413354 RPL12P30050 165 aaKnown RBP11.2□□□□□ -0.62
MCF2L-211ENST00000413354 TAS2R60P59551 318 aa11.2□□□□□ -0.62
MCF2L-211ENST00000413354 DAD1P61803 113 aa11.2□□□□□ -0.62
MCF2L-211ENST00000413354 GCSAMLQ5JQS6 135 aa11.2□□□□□ -0.62
MCF2L-211ENST00000413354 RPP25LQ8N5L8 163 aaKnown RBP11.2□□□□□ -0.62
MCF2L-211ENST00000413354 LINC01587Q99440 93 aa11.2□□□□□ -0.62
MCF2L-211ENST00000413354 AAMDCQ9H7C9 122 aa11.2□□□□□ -0.62
MCF2L-211ENST00000413354 ALG5Q9Y673 324 aa11.2□□□□□ -0.62
MCF2L-211ENST00000413354 PRAC2D3DTV9 90 aa11.19□□□□□ -0.62
MCF2L-211ENST00000413354 LEPP41159 167 aa11.19□□□□□ -0.62
MCF2L-211ENST00000413354 SCGB1C1Q8TD33 95 aa11.19□□□□□ -0.62
MCF2L-211ENST00000413354 C16orf74Q96GX8 76 aa11.19□□□□□ -0.62
MCF2L-211ENST00000413354 SLC25A2Q9BXI2 301 aa11.19□□□□□ -0.62
MCF2L-211ENST00000413354 NPIPB6E9PJ23 425 aa11.18□□□□□ -0.62
MCF2L-211ENST00000413354 H7BYZ3 331 aa11.18□□□□□ -0.62
MCF2L-211ENST00000413354 PYYP10082 97 aa11.18□□□□□ -0.62
MCF2L-211ENST00000413354 MIR17HGQ75NE6 70 aa11.18□□□□□ -0.62
MCF2L-211ENST00000413354 BLNKQ8WV28 456 aa11.18□□□□□ -0.62
MCF2L-211ENST00000413354 PARD6GQ9BYG4 376 aaPredicted RBP11.18□□□□□ -0.62
MCF2L-211ENST00000413354 FUT9Q9Y231 359 aa11.18□□□□□ -0.62
MCF2L-211ENST00000413354 PRB4P10163 310 aaPredicted RBP11.17□□□□□ -0.62
MCF2L-211ENST00000413354 FFAR4Q5NUL3 377 aa11.17□□□□□ -0.62
MCF2L-211ENST00000413354 ZNF493Q6ZR52 646 aa11.17□□□□□ -0.62
MCF2L-211ENST00000413354 FAM167A-AS1Q96KT0 104 aa11.17□□□□□ -0.62
MCF2L-211ENST00000413354 PAXXQ9BUH6 204 aa11.17□□□□□ -0.62
MCF2L-211ENST00000413354 SMIM3Q9BZL3 60 aa11.17□□□□□ -0.62
MCF2L-211ENST00000413354 MED28Q9H204 178 aa11.17□□□□□ -0.62
MCF2L-211ENST00000413354 OR51M1Q9H341 326 aa11.17□□□□□ -0.62
MCF2L-211ENST00000413354 KMT2AQ03164 3969 aa11.16□□□□□ -0.62
MCF2L-211ENST00000413354 M0R3E3 92 aa11.16□□□□□ -0.62
MCF2L-211ENST00000413354 NDUFB4O95168 129 aa11.16□□□□□ -0.62
MCF2L-211ENST00000413354 NBEAP1P0C6P0 100 aa11.16□□□□□ -0.62
MCF2L-211ENST00000413354 P0DMU3 169 aa11.16□□□□□ -0.62
MCF2L-211ENST00000413354 FAM231AP0DMU4 169 aa11.16□□□□□ -0.62
MCF2L-211ENST00000413354 FAM231CP0DMU5 169 aa11.16□□□□□ -0.62
MCF2L-211ENST00000413354 HTN3P15516 51 aa11.16□□□□□ -0.62
MCF2L-211ENST00000413354 TAS2R45P59539 299 aa11.16□□□□□ -0.62
MCF2L-211ENST00000413354 GFI1BQ5VTD9 330 aa11.16□□□□□ -0.62
MCF2L-211ENST00000413354 TMEM263Q8WUH6 116 aaKnown RBP11.16□□□□□ -0.62
MCF2L-211ENST00000413354 VPS13DQ5THJ4 4388 aa11.15□□□□□ -0.62
MCF2L-211ENST00000413354 OR7C2O60412 319 aa11.15□□□□□ -0.62
MCF2L-211ENST00000413354 CT45A10P0DMU9 189 aa11.15□□□□□ -0.62
MCF2L-211ENST00000413354 HTN1P15515 57 aa11.15□□□□□ -0.62
MCF2L-211ENST00000413354 KHDC3LQ587J8 217 aa11.15□□□□□ -0.62
MCF2L-211ENST00000413354 CCDC28AQ8IWP9 274 aa11.15□□□□□ -0.62
MCF2L-211ENST00000413354 ASB13Q8WXK3 278 aa11.15□□□□□ -0.62
MCF2L-211ENST00000413354 LINC00477Q96M19 166 aa11.15□□□□□ -0.62
MCF2L-211ENST00000413354 TIMM8BQ9Y5J9 83 aaPredicted RBP11.15□□□□□ -0.62
MCF2L-211ENST00000413354 PLAC8L1A1L4L8 177 aa11.14□□□□□ -0.63
MCF2L-211ENST00000413354 PRM2P04554 102 aa11.14□□□□□ -0.63
MCF2L-211ENST00000413354 SLC25A5P05141 298 aaKnown RBP11.14□□□□□ -0.63
MCF2L-211ENST00000413354 AZU1P20160 251 aa11.14□□□□□ -0.63
MCF2L-211ENST00000413354 ICAM4Q14773 271 aa11.14□□□□□ -0.63
MCF2L-211ENST00000413354 EXOC3-AS1Q8N2X6 119 aa11.14□□□□□ -0.63
MCF2L-211ENST00000413354 RNASE8Q8TDE3 154 aaKnown RBP11.14□□□□□ -0.63
MCF2L-211ENST00000413354 RNF141Q8WVD5 230 aa11.14□□□□□ -0.63
MCF2L-211ENST00000413354 FXYD5Q96DB9 178 aa11.14□□□□□ -0.63
MCF2L-211ENST00000413354 PLA2G2EQ9NZK7 142 aa11.14□□□□□ -0.63
MCF2L-211ENST00000413354 DNAH6Q9C0G6 4158 aa11.13□□□□□ -0.63
MCF2L-211ENST00000413354 OR10J4P0C629 311 aa11.13□□□□□ -0.63
MCF2L-211ENST00000413354 DEFB130BP0DP73 79 aa11.13□□□□□ -0.63
MCF2L-211ENST00000413354 DEFB130AP0DP74 79 aa11.13□□□□□ -0.63
MCF2L-211ENST00000413354 UBE2L3P68036 154 aaKnown RBP11.13□□□□□ -0.63
MCF2L-211ENST00000413354 ZNF266Q14584 549 aa11.13□□□□□ -0.63
MCF2L-211ENST00000413354 FCN2Q15485 313 aa11.13□□□□□ -0.63
MCF2L-211ENST00000413354 ACOT6Q3I5F7 207 aaPredicted RBP11.13□□□□□ -0.63
MCF2L-211ENST00000413354 TMEM78Q5T7P6 136 aa11.13□□□□□ -0.63
MCF2L-211ENST00000413354 LYPD1Q8N2G4 141 aa11.13□□□□□ -0.63
MCF2L-211ENST00000413354 PYGO2Q9BRQ0 406 aa11.13□□□□□ -0.63
MCF2L-211ENST00000413354 J3KRW8 73 aa11.12□□□□□ -0.63
MCF2L-211ENST00000413354 CSN1S1P47710 185 aa11.12□□□□□ -0.63
MCF2L-211ENST00000413354 KIR3DS1Q14943 382 aa11.12□□□□□ -0.63
MCF2L-211ENST00000413354 FAM122CQ6P4D5 195 aa11.12□□□□□ -0.63
MCF2L-211ENST00000413354 C9orf47Q6ZRZ4 202 aa11.12□□□□□ -0.63
MCF2L-211ENST00000413354 POM121L12Q8N7R1 296 aa11.12□□□□□ -0.63
MCF2L-211ENST00000413354 C15orf53Q8NAA6 179 aa11.12□□□□□ -0.63
MCF2L-211ENST00000413354 TRAV12-3A0A0B4J271 114 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms