RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 DIRC3C9JPN6 131 aa5.02□□□□□ -1.61
VPS41-204ENST00000413141 M0R036 132 aa5.02□□□□□ -1.61
VPS41-204ENST00000413141 ISLRO14498 428 aa5.02□□□□□ -1.61
VPS41-204ENST00000413141 CSN3P07498 182 aa5.02□□□□□ -1.61
VPS41-204ENST00000413141 CSN1S1P47710 185 aa5.02□□□□□ -1.61
VPS41-204ENST00000413141 GNG4P50150 75 aa5.02□□□□□ -1.61
VPS41-204ENST00000413141 TAS2R60P59551 318 aa5.02□□□□□ -1.61
VPS41-204ENST00000413141 UBE2G1P62253 170 aa5.02□□□□□ -1.61
VPS41-204ENST00000413141 RPL23P62829 140 aaKnown RBP5.02□□□□□ -1.61
VPS41-204ENST00000413141 RPL11P62913 178 aaKnown RBP5.02□□□□□ -1.61
VPS41-204ENST00000413141 RHEBQ15382 184 aa5.02□□□□□ -1.61
VPS41-204ENST00000413141 ADIRFQ15847 76 aa5.02□□□□□ -1.61
VPS41-204ENST00000413141 TMEM241Q24JQ0 296 aa5.02□□□□□ -1.61
VPS41-204ENST00000413141 KRTAP24-1Q3LI83 254 aa5.02□□□□□ -1.61
VPS41-204ENST00000413141 IGFL4Q6B9Z1 124 aa5.02□□□□□ -1.61
VPS41-204ENST00000413141 ATRAIDQ6UW56 229 aa5.02□□□□□ -1.61
VPS41-204ENST00000413141 GOLT1AQ6ZVE7 132 aa5.02□□□□□ -1.61
VPS41-204ENST00000413141 Q86TA4 180 aa5.02□□□□□ -1.61
VPS41-204ENST00000413141 LINC01551Q86U37 167 aa5.02□□□□□ -1.61
VPS41-204ENST00000413141 PRIMA1Q86XR5 153 aa5.02□□□□□ -1.61
VPS41-204ENST00000413141 LINC00528Q8N1L1 170 aa5.02□□□□□ -1.61
VPS41-204ENST00000413141 RNF182Q8N6D2 247 aa5.02□□□□□ -1.61
VPS41-204ENST00000413141 ARL6IP6Q8N6S5 226 aa5.02□□□□□ -1.61
VPS41-204ENST00000413141 TMEM75Q8N9X5 138 aa5.02□□□□□ -1.61
VPS41-204ENST00000413141 MRPL53Q96EL3 112 aaKnown RBP5.02□□□□□ -1.61
VPS41-204ENST00000413141 FMC1Q96HJ9 113 aa5.02□□□□□ -1.61
VPS41-204ENST00000413141 C16orf92Q96LL3 132 aa5.02□□□□□ -1.61
VPS41-204ENST00000413141 LINC00479Q96M42 142 aa5.02□□□□□ -1.61
VPS41-204ENST00000413141 CITED1Q99966 193 aa5.02□□□□□ -1.61
VPS41-204ENST00000413141 PRELID1Q9Y255 219 aa5.02□□□□□ -1.61
VPS41-204ENST00000413141 KLF12Q9Y4X4 402 aa5.02□□□□□ -1.61
VPS41-204ENST00000413141 SELENOKQ9Y6D0 94 aa5.02□□□□□ -1.61
VPS41-204ENST00000413141 IGKV3-7A0A075B6H7 116 aa5.01□□□□□ -1.61
VPS41-204ENST00000413141 IGKV2-40A0A087WW87 121 aaPredicted RBP5.01□□□□□ -1.61
VPS41-204ENST00000413141 TRAV8-1A0A0A6YYK1 113 aa5.01□□□□□ -1.61
VPS41-204ENST00000413141 TRAV34A0A0B4J273 112 aa5.01□□□□□ -1.61
VPS41-204ENST00000413141 TRBV6-1A0A0K0K1D8 114 aa5.01□□□□□ -1.61
VPS41-204ENST00000413141 LOC100996750A0A140TA64 210 aa5.01□□□□□ -1.61
VPS41-204ENST00000413141 K7EQM0 130 aa5.01□□□□□ -1.61
VPS41-204ENST00000413141 OVOL1O14753 267 aa5.01□□□□□ -1.61
VPS41-204ENST00000413141 SCO1O75880 301 aa5.01□□□□□ -1.61
VPS41-204ENST00000413141 LTAP01374 205 aa5.01□□□□□ -1.61
VPS41-204ENST00000413141 IGKV2D-40P01614 121 aaPredicted RBP5.01□□□□□ -1.61
VPS41-204ENST00000413141 IGLV2-11P01706 119 aa5.01□□□□□ -1.61
VPS41-204ENST00000413141 S100A9P06702 114 aaKnown RBP5.01□□□□□ -1.61
VPS41-204ENST00000413141 PRB4P10163 310 aaPredicted RBP5.01□□□□□ -1.61
VPS41-204ENST00000413141 SMCPP49901 116 aaPredicted RBP5.01□□□□□ -1.61
VPS41-204ENST00000413141 PSG3Q16557 428 aa5.01□□□□□ -1.61
VPS41-204ENST00000413141 TMEM183BQ1AE95 376 aa5.01□□□□□ -1.61
VPS41-204ENST00000413141 SAMD13Q5VXD3 122 aa5.01□□□□□ -1.61
VPS41-204ENST00000413141 DYNLRB2Q8TF09 96 aa5.01□□□□□ -1.61
VPS41-204ENST00000413141 DCANP1Q8TF63 244 aa5.01□□□□□ -1.61
VPS41-204ENST00000413141 C20orf173Q96LM9 149 aa5.01□□□□□ -1.61
VPS41-204ENST00000413141 KRTAP4-6Q9BYQ5 205 aa5.01□□□□□ -1.61
VPS41-204ENST00000413141 MS4A6AQ9H2W1 248 aa5.01□□□□□ -1.61
VPS41-204ENST00000413141 CLEC5AQ9NY25 188 aa5.01□□□□□ -1.61
VPS41-204ENST00000413141 LY96Q9Y6Y9 160 aa5.01□□□□□ -1.61
VPS41-204ENST00000413141 C7orf77A4D0Y5 90 aa5□□□□□ -1.61
VPS41-204ENST00000413141 RBAKDNA6NC62 111 aa5□□□□□ -1.61
VPS41-204ENST00000413141 ZNF705FA8MVS1 300 aaPredicted RBP5□□□□□ -1.61
VPS41-204ENST00000413141 B4DEV8 164 aa5□□□□□ -1.61
VPS41-204ENST00000413141 PRAC2D3DTV9 90 aa5□□□□□ -1.61
VPS41-204ENST00000413141 K7EN84 100 aa5□□□□□ -1.61
VPS41-204ENST00000413141 K7EQG2 157 aa5□□□□□ -1.61
VPS41-204ENST00000413141 IGLV2-8P01709 118 aa5□□□□□ -1.61
VPS41-204ENST00000413141 PF4P02776 101 aa5□□□□□ -1.61
VPS41-204ENST00000413141 FLI1Q01543 452 aaPredicted RBP5□□□□□ -1.61
VPS41-204ENST00000413141 LCN12Q6JVE5 192 aa5□□□□□ -1.61
VPS41-204ENST00000413141 TMEM61Q8N0U2 210 aa5□□□□□ -1.61
VPS41-204ENST00000413141 GBGT1Q8N5D6 347 aa5□□□□□ -1.61
VPS41-204ENST00000413141 LINC00482Q8N8I6 264 aa5□□□□□ -1.61
VPS41-204ENST00000413141 NHLRC2Q8NBF2 726 aa5□□□□□ -1.61
VPS41-204ENST00000413141 ZNF738Q8NE65 137 aa5□□□□□ -1.61
VPS41-204ENST00000413141 ISOC2Q96AB3 205 aa5□□□□□ -1.61
VPS41-204ENST00000413141 SMIM12Q96EX1 92 aa5□□□□□ -1.61
VPS41-204ENST00000413141 SGK494Q96LW2 274 aa5□□□□□ -1.61
VPS41-204ENST00000413141 RPS10P5Q9NQ39 176 aa5□□□□□ -1.61
VPS41-204ENST00000413141 AURKAIP1Q9NWT8 199 aaPredicted RBP5□□□□□ -1.61
VPS41-204ENST00000413141 SIGLEC8Q9NYZ4 499 aa5□□□□□ -1.61
VPS41-204ENST00000413141 JMJD1CQ15652 2540 aa5□□□□□ -1.61
VPS41-204ENST00000413141 NIPBLQ6KC79 2804 aaeCLIP5□□□□□ -1.61
VPS41-204ENST00000413141 A0A087WWC5 75 aa4.99□□□□□ -1.61
VPS41-204ENST00000413141 TRAV2A0A0B4J234 112 aa4.99□□□□□ -1.61
VPS41-204ENST00000413141 FBLL1A6NHQ2 334 aaKnown RBP4.99□□□□□ -1.61
VPS41-204ENST00000413141 DNASE2O00115 360 aaPredicted RBP4.99□□□□□ -1.61
VPS41-204ENST00000413141 TSPAN4O14817 238 aa4.99□□□□□ -1.61
VPS41-204ENST00000413141 ID1P41134 155 aa4.99□□□□□ -1.61
VPS41-204ENST00000413141 TFPI2P48307 235 aa4.99□□□□□ -1.61
VPS41-204ENST00000413141 DEFB114Q30KQ6 69 aa4.99□□□□□ -1.61
VPS41-204ENST00000413141 RNF212Q495C1 297 aa4.99□□□□□ -1.61
VPS41-204ENST00000413141 CD300EQ496F6 205 aaPredicted RBP4.99□□□□□ -1.61
VPS41-204ENST00000413141 RBPMS2Q6ZRY4 209 aaKnown RBP4.99□□□□□ -1.61
VPS41-204ENST00000413141 PRNTQ86SH4 94 aa4.99□□□□□ -1.61
VPS41-204ENST00000413141 BAGE2Q86Y30 109 aa4.99□□□□□ -1.61
VPS41-204ENST00000413141 CBLN2Q8IUK8 224 aa4.99□□□□□ -1.61
VPS41-204ENST00000413141 FAM24BQ8N5W8 94 aa4.99□□□□□ -1.61
VPS41-204ENST00000413141 OCC1Q8TAD7 63 aa4.99□□□□□ -1.61
VPS41-204ENST00000413141 Q8TAT8 98 aa4.99□□□□□ -1.61
VPS41-204ENST00000413141 VGLL1Q99990 258 aa4.99□□□□□ -1.61
VPS41-204ENST00000413141 MLST8Q9BVC4 326 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms