RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 Q6ZS49 121 aa6.9□□□□□ -1.3
PBRM1-209ENST00000412587 PCP2Q8IVA1 136 aa6.9□□□□□ -1.3
PBRM1-209ENST00000412587 FAM90A9PA6NNJ1 464 aa6.9□□□□□ -1.31
PBRM1-209ENST00000412587 UFSP1Q6NVU6 142 aa6.9□□□□□ -1.31
PBRM1-209ENST00000412587 NTN5Q8WTR8 489 aaPredicted RBP6.9□□□□□ -1.31
PBRM1-209ENST00000412587 KIAA2026Q5HYC2 2103 aa6.9□□□□□ -1.31
PBRM1-209ENST00000412587 IGHV3OR16-13A0A075B7E8 117 aa6.89□□□□□ -1.31
PBRM1-209ENST00000412587 IGHV3-74A0A0B4J1X5 117 aa6.89□□□□□ -1.31
PBRM1-209ENST00000412587 SMIM9A6NGZ8 99 aa6.89□□□□□ -1.31
PBRM1-209ENST00000412587 F5H768 121 aa6.89□□□□□ -1.31
PBRM1-209ENST00000412587 H3BTX0 84 aa6.89□□□□□ -1.31
PBRM1-209ENST00000412587 H7C1H1 209 aa6.89□□□□□ -1.31
PBRM1-209ENST00000412587 PIP4P1Q86T03 277 aa6.89□□□□□ -1.31
PBRM1-209ENST00000412587 C3orf56Q8N813 242 aa6.89□□□□□ -1.31
PBRM1-209ENST00000412587 JMJD8Q96S16 334 aa6.89□□□□□ -1.31
PBRM1-209ENST00000412587 Q9H3A6 140 aa6.89□□□□□ -1.31
PBRM1-209ENST00000412587 C21orf62Q9NYP8 219 aa6.89□□□□□ -1.31
PBRM1-209ENST00000412587 PTPRQQ9UMZ3 2332 aa6.89□□□□□ -1.31
PBRM1-209ENST00000412587 C5orf63A6NC05 138 aa6.89□□□□□ -1.31
PBRM1-209ENST00000412587 RNF144BQ7Z419 303 aa6.89□□□□□ -1.31
PBRM1-209ENST00000412587 ANKRD29Q8N6D5 301 aa6.89□□□□□ -1.31
PBRM1-209ENST00000412587 DDB2Q92466 427 aa6.89□□□□□ -1.31
PBRM1-209ENST00000412587 NBR2O15453 112 aa6.89□□□□□ -1.31
PBRM1-209ENST00000412587 SAA1P0DJI8 122 aaPredicted RBP6.89□□□□□ -1.31
PBRM1-209ENST00000412587 DLX6P56179 175 aa6.89□□□□□ -1.31
PBRM1-209ENST00000412587 DNAJC30Q96LL9 226 aa6.89□□□□□ -1.31
PBRM1-209ENST00000412587 C1orf147Q96MC9 270 aaPredicted RBP6.89□□□□□ -1.31
PBRM1-209ENST00000412587 OTORQ9NRC9 128 aa6.89□□□□□ -1.31
PBRM1-209ENST00000412587 TP53TG3Q9ULZ0 132 aa6.89□□□□□ -1.31
PBRM1-209ENST00000412587 S4R3C0 116 aa6.89□□□□□ -1.31
PBRM1-209ENST00000412587 IGKV1-27A0A075B6S5 117 aa6.89□□□□□ -1.31
PBRM1-209ENST00000412587 PF4P02776 101 aa6.89□□□□□ -1.31
PBRM1-209ENST00000412587 LGALS1P09382 135 aaKnown RBP6.89□□□□□ -1.31
PBRM1-209ENST00000412587 CFHR2P36980 270 aa6.89□□□□□ -1.31
PBRM1-209ENST00000412587 FXYD7P58549 80 aa6.89□□□□□ -1.31
PBRM1-209ENST00000412587 PRR30Q53SZ7 412 aaPredicted RBP6.89□□□□□ -1.31
PBRM1-209ENST00000412587 C20orf204Q6ZNR8 217 aa6.89□□□□□ -1.31
PBRM1-209ENST00000412587 C8orf46Q8TAG6 207 aa6.89□□□□□ -1.31
PBRM1-209ENST00000412587 MRAPQ8TCY5 172 aa6.89□□□□□ -1.31
PBRM1-209ENST00000412587 TECTAO75443 2155 aa6.88□□□□□ -1.31
PBRM1-209ENST00000412587 PYYP10082 97 aa6.88□□□□□ -1.31
PBRM1-209ENST00000412587 ORMDL2Q53FV1 153 aa6.88□□□□□ -1.31
PBRM1-209ENST00000412587 IGFL3Q6UXB1 125 aa6.88□□□□□ -1.31
PBRM1-209ENST00000412587 RPUSD1Q9UJJ7 312 aaKnown RBP6.88□□□□□ -1.31
PBRM1-209ENST00000412587 FANCMQ8IYD8 2048 aa6.88□□□□□ -1.31
PBRM1-209ENST00000412587 TRBV25-1A0A075B6N4 114 aa6.88□□□□□ -1.31
PBRM1-209ENST00000412587 UPK2O00526 184 aa6.88□□□□□ -1.31
PBRM1-209ENST00000412587 NTF4P34130 210 aa6.88□□□□□ -1.31
PBRM1-209ENST00000412587 GTSF1Q8WW33 167 aa6.88□□□□□ -1.31
PBRM1-209ENST00000412587 TNFRSF18Q9Y5U5 241 aa6.88□□□□□ -1.31
PBRM1-209ENST00000412587 ZGRF1Q86YA3 2104 aa6.88□□□□□ -1.31
PBRM1-209ENST00000412587 TRAV40A0A0B4J280 105 aa6.88□□□□□ -1.31
PBRM1-209ENST00000412587 TMEM178BH3BS89 294 aa6.88□□□□□ -1.31
PBRM1-209ENST00000412587 PSPNO60542 156 aa6.88□□□□□ -1.31
PBRM1-209ENST00000412587 PPP1R17O96001 155 aa6.88□□□□□ -1.31
PBRM1-209ENST00000412587 FOXL2NBQ6ZUU3 175 aa6.88□□□□□ -1.31
PBRM1-209ENST00000412587 LINC00173Q6ZV60 143 aa6.88□□□□□ -1.31
PBRM1-209ENST00000412587 FOXA2Q9Y261 457 aaPredicted RBP6.88□□□□□ -1.31
PBRM1-209ENST00000412587 IGHV3-49A0A0A0MS15 119 aa6.88□□□□□ -1.31
PBRM1-209ENST00000412587 FAM236AA0A1B0GUQ0 79 aa6.88□□□□□ -1.31
PBRM1-209ENST00000412587 FAM236BA0A1B0GV22 79 aa6.88□□□□□ -1.31
PBRM1-209ENST00000412587 IGHV3-23P01764 117 aa6.88□□□□□ -1.31
PBRM1-209ENST00000412587 CD24P25063 80 aa6.88□□□□□ -1.31
PBRM1-209ENST00000412587 DSCR9P59020 149 aa6.88□□□□□ -1.31
PBRM1-209ENST00000412587 LAGE3Q14657 143 aa6.88□□□□□ -1.31
PBRM1-209ENST00000412587 LINC00479Q96M42 142 aa6.88□□□□□ -1.31
PBRM1-209ENST00000412587 ZNF492Q9P255 531 aa6.88□□□□□ -1.31
PBRM1-209ENST00000412587 MYLKQ15746 1914 aa6.87□□□□□ -1.31
PBRM1-209ENST00000412587 FRMPD3Q5JV73 1810 aa6.87□□□□□ -1.31
PBRM1-209ENST00000412587 IGHV3OR16-12A0A075B7B8 117 aa6.87□□□□□ -1.31
PBRM1-209ENST00000412587 FOXI3A8MTJ6 420 aaPredicted RBP6.87□□□□□ -1.31
PBRM1-209ENST00000412587 TMEM42Q69YG0 159 aa6.87□□□□□ -1.31
PBRM1-209ENST00000412587 LRRC75A-AS1Q8N1F1 130 aa6.87□□□□□ -1.31
PBRM1-209ENST00000412587 C15orf62A8K5M9 175 aa6.87□□□□□ -1.31
PBRM1-209ENST00000412587 IGHG4P01861 327 aa6.87□□□□□ -1.31
PBRM1-209ENST00000412587 HLA-DMBP28068 263 aa6.87□□□□□ -1.31
PBRM1-209ENST00000412587 DUTP33316 252 aaKnown RBP6.87□□□□□ -1.31
PBRM1-209ENST00000412587 PROK2Q9HC23 129 aa6.87□□□□□ -1.31
PBRM1-209ENST00000412587 M0R2P5 195 aa6.87□□□□□ -1.31
PBRM1-209ENST00000412587 ACYP1P07311 99 aa6.87□□□□□ -1.31
PBRM1-209ENST00000412587 SNRPD3P62318 126 aaKnown RBP6.87□□□□□ -1.31
PBRM1-209ENST00000412587 SPG11Q96JI7 2443 aa6.87□□□□□ -1.31
PBRM1-209ENST00000412587 SHISA9B4DS77 424 aa6.86□□□□□ -1.31
PBRM1-209ENST00000412587 CCDC179H3BU77 68 aa6.86□□□□□ -1.31
PBRM1-209ENST00000412587 TIMM23O14925 209 aa6.86□□□□□ -1.31
PBRM1-209ENST00000412587 IGKV3-15P01624 115 aa6.86□□□□□ -1.31
PBRM1-209ENST00000412587 ATP5G1P05496 136 aa6.86□□□□□ -1.31
PBRM1-209ENST00000412587 GTF3C1Q12789 2109 aa6.86□□□□□ -1.31
PBRM1-209ENST00000412587 ZNF581Q9P0T4 197 aa6.86□□□□□ -1.31
PBRM1-209ENST00000412587 PRO1854Q9UHT4 67 aa6.86□□□□□ -1.31
PBRM1-209ENST00000412587 PIEZO1Q92508 2521 aa6.86□□□□□ -1.31
PBRM1-209ENST00000412587 TRAV12-3A0A0B4J271 114 aa6.86□□□□□ -1.31
PBRM1-209ENST00000412587 E9PLD3 99 aa6.86□□□□□ -1.31
PBRM1-209ENST00000412587 UTF1Q5T230 341 aa6.86□□□□□ -1.31
PBRM1-209ENST00000412587 KIR2DL4Q99706 377 aa6.86□□□□□ -1.31
PBRM1-209ENST00000412587 ATOX1O00244 68 aa6.86□□□□□ -1.31
PBRM1-209ENST00000412587 TMEM158Q8WZ71 300 aa6.86□□□□□ -1.31
PBRM1-209ENST00000412587 C15orf61A6NNL5 157 aa6.86□□□□□ -1.31
PBRM1-209ENST00000412587 UQCRQO14949 82 aa6.86□□□□□ -1.31
PBRM1-209ENST00000412587 IGHV3-11P01762 117 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms