RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 TFF3Q07654 80 aa3.69□□□□□ -1.82
PTPN13-202ENST00000411767 ODF3L1Q8IXM7 274 aa3.69□□□□□ -1.82
PTPN13-202ENST00000411767 ZNF491Q8N8L2 437 aa3.69□□□□□ -1.82
PTPN13-202ENST00000411767 MYH8P13535 1937 aa3.69□□□□□ -1.82
PTPN13-202ENST00000411767 EBI3Q14213 229 aa3.69□□□□□ -1.82
PTPN13-202ENST00000411767 TMEM196Q5HYL7 178 aa3.69□□□□□ -1.82
PTPN13-202ENST00000411767 IGF2BP2-AS1Q96M15 143 aa3.69□□□□□ -1.82
PTPN13-202ENST00000411767 Q9H8V8 135 aa3.69□□□□□ -1.82
PTPN13-202ENST00000411767 X6R8D5 127 aa3.69□□□□□ -1.82
PTPN13-202ENST00000411767 TUBGCP6Q96RT7 1819 aa3.69□□□□□ -1.82
PTPN13-202ENST00000411767 CACNA1CQ13936 2221 aa3.69□□□□□ -1.82
PTPN13-202ENST00000411767 CAMTA1Q9Y6Y1 1673 aa3.69□□□□□ -1.82
PTPN13-202ENST00000411767 FOXS1O43638 330 aa3.69□□□□□ -1.82
PTPN13-202ENST00000411767 NDUFS6O75380 124 aaKnown RBP3.69□□□□□ -1.82
PTPN13-202ENST00000411767 IGHV2-5P01817 119 aa3.69□□□□□ -1.82
PTPN13-202ENST00000411767 C5orf24Q7Z6I8 188 aa3.69□□□□□ -1.82
PTPN13-202ENST00000411767 DEFB124Q8NES8 71 aa3.69□□□□□ -1.82
PTPN13-202ENST00000411767 PRO0628Q9UI54 55 aa3.69□□□□□ -1.82
PTPN13-202ENST00000411767 A0A087WWL8 130 aa3.69□□□□□ -1.82
PTPN13-202ENST00000411767 RBAKDNA6NC62 111 aa3.69□□□□□ -1.82
PTPN13-202ENST00000411767 TFF1P04155 84 aa3.69□□□□□ -1.82
PTPN13-202ENST00000411767 IGKV2-40A0A087WW87 121 aaPredicted RBP3.69□□□□□ -1.82
PTPN13-202ENST00000411767 IGKV2D-40P01614 121 aaPredicted RBP3.69□□□□□ -1.82
PTPN13-202ENST00000411767 PAQR4Q8N4S7 273 aaPredicted RBP3.69□□□□□ -1.82
PTPN13-202ENST00000411767 SMIM14Q96QK8 99 aa3.69□□□□□ -1.82
PTPN13-202ENST00000411767 FAM208AQ9UK61 1670 aaKnown RBP3.69□□□□□ -1.82
PTPN13-202ENST00000411767 A6NDX4 124 aa3.68□□□□□ -1.82
PTPN13-202ENST00000411767 LGALS9O00182 355 aa3.68□□□□□ -1.82
PTPN13-202ENST00000411767 EIF4EBP3O60516 100 aaPredicted RBP3.68□□□□□ -1.82
PTPN13-202ENST00000411767 DAZ2Q13117 558 aaKnown RBP3.68□□□□□ -1.82
PTPN13-202ENST00000411767 SPINK14Q6IE38 97 aa3.68□□□□□ -1.82
PTPN13-202ENST00000411767 DAZ3Q9NR90 486 aaKnown RBP3.68□□□□□ -1.82
PTPN13-202ENST00000411767 FAM201AQ5SY85 155 aa3.68□□□□□ -1.82
PTPN13-202ENST00000411767 SPEF2Q9C093 1822 aa3.68□□□□□ -1.82
PTPN13-202ENST00000411767 IGKV1D-12P01611 117 aa3.68□□□□□ -1.82
PTPN13-202ENST00000411767 IFI6P09912 130 aa3.68□□□□□ -1.82
PTPN13-202ENST00000411767 IGHV1-2P23083 117 aa3.68□□□□□ -1.82
PTPN13-202ENST00000411767 PIP4P2Q8N4L2 257 aa3.68□□□□□ -1.82
PTPN13-202ENST00000411767 LMO7Q8WWI1 1683 aa3.68□□□□□ -1.82
PTPN13-202ENST00000411767 ZNF646O15015 1829 aaPredicted RBP3.68□□□□□ -1.82
PTPN13-202ENST00000411767 IGHV1-58A0A0C4DH39 117 aa3.68□□□□□ -1.82
PTPN13-202ENST00000411767 SDHAF1A6NFY7 115 aa3.68□□□□□ -1.82
PTPN13-202ENST00000411767 MST1LQ2TV78 715 aa3.68□□□□□ -1.82
PTPN13-202ENST00000411767 FXYD5Q96DB9 178 aa3.68□□□□□ -1.82
PTPN13-202ENST00000411767 SCN9AQ15858 1988 aa3.68□□□□□ -1.82
PTPN13-202ENST00000411767 TRPM3Q9HCF6 1732 aaPredicted RBP3.68□□□□□ -1.82
PTPN13-202ENST00000411767 ADAMTS7Q9UKP4 1686 aa3.68□□□□□ -1.82
PTPN13-202ENST00000411767 MED1Q15648 1581 aaPredicted RBP3.68□□□□□ -1.82
PTPN13-202ENST00000411767 SPAG17Q6Q759 2223 aa3.68□□□□□ -1.82
PTPN13-202ENST00000411767 C5orf63A6NC05 138 aa3.68□□□□□ -1.82
PTPN13-202ENST00000411767 WISP1O95388 367 aa3.68□□□□□ -1.82
PTPN13-202ENST00000411767 LINC00467Q9BRT7 94 aa3.68□□□□□ -1.82
PTPN13-202ENST00000411767 WFDC1Q9HC57 220 aa3.68□□□□□ -1.82
PTPN13-202ENST00000411767 SIPA1L3O60292 1781 aaPredicted RBP3.68□□□□□ -1.82
PTPN13-202ENST00000411767 CRYBG1Q9Y4K1 1723 aa3.68□□□□□ -1.82
PTPN13-202ENST00000411767 CAMK2N1Q7Z7J9 78 aa3.68□□□□□ -1.82
PTPN13-202ENST00000411767 EXOC3-AS1Q8N2X6 119 aa3.68□□□□□ -1.82
PTPN13-202ENST00000411767 CRYGNQ8WXF5 182 aa3.68□□□□□ -1.82
PTPN13-202ENST00000411767 Q9HAA7 133 aa3.68□□□□□ -1.82
PTPN13-202ENST00000411767 LST1O00453 97 aa3.68□□□□□ -1.82
PTPN13-202ENST00000411767 NDUFB8O95169 186 aa3.68□□□□□ -1.82
PTPN13-202ENST00000411767 KDM3BQ7LBC6 1761 aa3.67□□□□□ -1.82
PTPN13-202ENST00000411767 CRIPTQ9P021 101 aa3.67□□□□□ -1.82
PTPN13-202ENST00000411767 TRAV26-1A0A087WT03 109 aa3.67□□□□□ -1.82
PTPN13-202ENST00000411767 C2orf70A6NJV1 201 aa3.67□□□□□ -1.82
PTPN13-202ENST00000411767 K7EM74 188 aa3.67□□□□□ -1.82
PTPN13-202ENST00000411767 OCC1Q8TAD7 63 aa3.67□□□□□ -1.82
PTPN13-202ENST00000411767 TTTY12Q9BZ98 90 aa3.67□□□□□ -1.82
PTPN13-202ENST00000411767 IGHV1-69DA0A0B4J2H0 117 aa3.67□□□□□ -1.82
PTPN13-202ENST00000411767 PATE4P0C8F1 98 aa3.67□□□□□ -1.82
PTPN13-202ENST00000411767 GATA3P23771 443 aa3.67□□□□□ -1.82
PTPN13-202ENST00000411767 CFAP126Q5VTH2 177 aa3.67□□□□□ -1.82
PTPN13-202ENST00000411767 MSRB3Q8IXL7 192 aa3.67□□□□□ -1.82
PTPN13-202ENST00000411767 IGLV3-9A0A075B6K5 115 aa3.67□□□□□ -1.82
PTPN13-202ENST00000411767 WI2-2373I1.2A0A1W2PRP0 233 aa3.67□□□□□ -1.82
PTPN13-202ENST00000411767 MED14OSP0DP75 135 aa3.67□□□□□ -1.82
PTPN13-202ENST00000411767 NDPQ00604 133 aa3.67□□□□□ -1.82
PTPN13-202ENST00000411767 C20orf204Q6ZNR8 217 aa3.67□□□□□ -1.82
PTPN13-202ENST00000411767 FOXI2Q6ZQN5 318 aa3.67□□□□□ -1.82
PTPN13-202ENST00000411767 TMEM223A0PJW6 202 aa3.67□□□□□ -1.82
PTPN13-202ENST00000411767 IGHV3-48P01763 117 aa3.67□□□□□ -1.82
PTPN13-202ENST00000411767 Q6ZS49 121 aa3.67□□□□□ -1.82
PTPN13-202ENST00000411767 ZNF525Q8N782 197 aa3.67□□□□□ -1.82
PTPN13-202ENST00000411767 WIPF2Q8TF74 440 aaPredicted RBP3.67□□□□□ -1.82
PTPN13-202ENST00000411767 DICER1Q9UPY3 1922 aaKnown RBP3.67□□□□□ -1.82
PTPN13-202ENST00000411767 CELA3BP08861 270 aa3.67□□□□□ -1.82
PTPN13-202ENST00000411767 MRPL51Q4U2R6 128 aaKnown RBP3.67□□□□□ -1.82
PTPN13-202ENST00000411767 LMO3Q8TAP4 145 aa3.67□□□□□ -1.82
PTPN13-202ENST00000411767 KLF14Q8TD94 323 aaPredicted RBP3.67□□□□□ -1.82
PTPN13-202ENST00000411767 CTHRC1Q96CG8 243 aa3.67□□□□□ -1.82
PTPN13-202ENST00000411767 ALS2Q96Q42 1657 aa3.66□□□□□ -1.82
PTPN13-202ENST00000411767 LECT2O14960 151 aa3.66□□□□□ -1.82
PTPN13-202ENST00000411767 RPL39P5Q59GN2 51 aa3.66□□□□□ -1.82
PTPN13-202ENST00000411767 S4R3C0 116 aa3.66□□□□□ -1.82
PTPN13-202ENST00000411767 IGKV6-21A0A0C4DH24 114 aa3.66□□□□□ -1.82
PTPN13-202ENST00000411767 C2CD4DB7Z1M9 353 aa3.66□□□□□ -1.82
PTPN13-202ENST00000411767 ERC2-IT1O76042 136 aa3.66□□□□□ -1.82
PTPN13-202ENST00000411767 EIF4EBP2Q13542 120 aaPredicted RBP3.66□□□□□ -1.82
PTPN13-202ENST00000411767 WFDC12Q8WWY7 111 aa3.66□□□□□ -1.82
PTPN13-202ENST00000411767 Q96M66 194 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms