RNA–Protein interactions for RNA: ENST00000411552.5

NOD1-202, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-202ENST00000411552 LYSTQ99698 3801 aa11.78□□□□□ -0.52
NOD1-202ENST00000411552 SMLR1H3BR10 107 aa11.77□□□□□ -0.53
NOD1-202ENST00000411552 M0R3E3 92 aa11.77□□□□□ -0.53
NOD1-202ENST00000411552 CRXO43186 299 aaPredicted RBP11.77□□□□□ -0.53
NOD1-202ENST00000411552 OR7C2O60412 319 aa11.77□□□□□ -0.53
NOD1-202ENST00000411552 AMBPP02760 352 aa11.77□□□□□ -0.53
NOD1-202ENST00000411552 NBEAP1P0C6P0 100 aa11.77□□□□□ -0.53
NOD1-202ENST00000411552 M6PRP20645 277 aa11.77□□□□□ -0.53
NOD1-202ENST00000411552 RAB2AP61019 212 aa11.77□□□□□ -0.53
NOD1-202ENST00000411552 ACOT6Q3I5F7 207 aaPredicted RBP11.77□□□□□ -0.53
NOD1-202ENST00000411552 BAP18Q8IXM2 172 aa11.77□□□□□ -0.53
NOD1-202ENST00000411552 EXOC3-AS1Q8N2X6 119 aa11.77□□□□□ -0.53
NOD1-202ENST00000411552 OR10J6PQ8NGY7 276 aa11.77□□□□□ -0.53
NOD1-202ENST00000411552 RNF141Q8WVD5 230 aa11.77□□□□□ -0.53
NOD1-202ENST00000411552 MRPL53Q96EL3 112 aaKnown RBP11.77□□□□□ -0.53
NOD1-202ENST00000411552 NEU1Q99519 415 aa11.77□□□□□ -0.53
NOD1-202ENST00000411552 PPP1R14DQ9NXH3 145 aa11.77□□□□□ -0.53
NOD1-202ENST00000411552 RYR3Q15413 4870 aa11.76□□□□□ -0.53
NOD1-202ENST00000411552 TRAV12-2A0A075B6T6 113 aa11.76□□□□□ -0.53
NOD1-202ENST00000411552 EIF3GO75821 320 aaKnown RBP eCLIP11.76□□□□□ -0.53
NOD1-202ENST00000411552 INSP01308 110 aa11.76□□□□□ -0.53
NOD1-202ENST00000411552 ATP6V0CP27449 155 aa11.76□□□□□ -0.53
NOD1-202ENST00000411552 KHDC3LQ587J8 217 aa11.76□□□□□ -0.53
NOD1-202ENST00000411552 OR2G3Q8NGZ4 309 aa11.76□□□□□ -0.53
NOD1-202ENST00000411552 SMIM9A6NGZ8 99 aa11.75□□□□□ -0.53
NOD1-202ENST00000411552 ARPC5O15511 151 aa11.75□□□□□ -0.53
NOD1-202ENST00000411552 TAS2R45P59539 299 aa11.75□□□□□ -0.53
NOD1-202ENST00000411552 ICAM4Q14773 271 aa11.75□□□□□ -0.53
NOD1-202ENST00000411552 RPL7L1Q6DKI1 246 aaKnown RBP11.75□□□□□ -0.53
NOD1-202ENST00000411552 PHYHIPLQ96FC7 376 aa11.75□□□□□ -0.53
NOD1-202ENST00000411552 PSMG3Q9BT73 122 aaPredicted RBP11.75□□□□□ -0.53
NOD1-202ENST00000411552 AAMDCQ9H7C9 122 aa11.75□□□□□ -0.53
NOD1-202ENST00000411552 PRELID1Q9Y255 219 aa11.75□□□□□ -0.53
NOD1-202ENST00000411552 SACSQ9NZJ4 4579 aa11.75□□□□□ -0.53
NOD1-202ENST00000411552 PLECQ15149 4684 aaKnown RBP11.74□□□□□ -0.53
NOD1-202ENST00000411552 A0A1W2PPV4 95 aa11.74□□□□□ -0.53
NOD1-202ENST00000411552 NUPR2A6NF83 97 aa11.74□□□□□ -0.53
NOD1-202ENST00000411552 NPIPB6E9PJ23 425 aa11.74□□□□□ -0.53
NOD1-202ENST00000411552 UBE2L3P68036 154 aaKnown RBP11.74□□□□□ -0.53
NOD1-202ENST00000411552 FAM122CQ6P4D5 195 aa11.74□□□□□ -0.53
NOD1-202ENST00000411552 CEMP1Q6PRD7 247 aaPredicted RBP11.74□□□□□ -0.53
NOD1-202ENST00000411552 OR10G4Q8NGN3 311 aa11.74□□□□□ -0.53
NOD1-202ENST00000411552 OR10G9Q8NGN4 311 aa11.74□□□□□ -0.53
NOD1-202ENST00000411552 OR10G7Q8NGN6 311 aa11.74□□□□□ -0.53
NOD1-202ENST00000411552 PHLDA1Q8WV24 401 aaPredicted RBP11.74□□□□□ -0.53
NOD1-202ENST00000411552 TMEM208Q9BTX3 173 aa11.74□□□□□ -0.53
NOD1-202ENST00000411552 SH3BGRL3Q9H299 93 aa11.74□□□□□ -0.53
NOD1-202ENST00000411552 CELA1Q9UNI1 258 aa11.74□□□□□ -0.53
NOD1-202ENST00000411552 BORCS7-ASMTA0A0B4J1R7 106 aa11.73□□□□□ -0.53
NOD1-202ENST00000411552 HBE1P02100 147 aa11.73□□□□□ -0.53
NOD1-202ENST00000411552 CT45A10P0DMU9 189 aa11.73□□□□□ -0.53
NOD1-202ENST00000411552 CDKN1BP46527 198 aa11.73□□□□□ -0.53
NOD1-202ENST00000411552 RPP25LQ8N5L8 163 aaKnown RBP11.73□□□□□ -0.53
NOD1-202ENST00000411552 DNAH1Q9P2D7 4330 aa11.72□□□□□ -0.53
NOD1-202ENST00000411552 EMP1P54849 157 aa11.72□□□□□ -0.53
NOD1-202ENST00000411552 RANP62826 216 aaKnown RBP11.72□□□□□ -0.53
NOD1-202ENST00000411552 SERF2P84101 59 aa11.72□□□□□ -0.53
NOD1-202ENST00000411552 KIR3DS1Q14943 382 aa11.72□□□□□ -0.53
NOD1-202ENST00000411552 ALMS1Q8TCU4 4167 aa11.72□□□□□ -0.53
NOD1-202ENST00000411552 LOC102723971A0A1B0GUV8 181 aa11.71□□□□□ -0.53
NOD1-202ENST00000411552 TMEM189A5PLL7 270 aa11.71□□□□□ -0.53
NOD1-202ENST00000411552 HMGB3O15347 200 aaKnown RBP11.71□□□□□ -0.53
NOD1-202ENST00000411552 PRM2P04554 102 aa11.71□□□□□ -0.53
NOD1-202ENST00000411552 TSPOP30536 169 aa11.71□□□□□ -0.53
NOD1-202ENST00000411552 CDC34P49427 236 aaPredicted RBP11.71□□□□□ -0.53
NOD1-202ENST00000411552 ERCC8Q13216 396 aa11.71□□□□□ -0.53
NOD1-202ENST00000411552 RRN3P1Q2M238 152 aa11.71□□□□□ -0.53
NOD1-202ENST00000411552 PQLC2Q6ZP29 291 aa11.71□□□□□ -0.53
NOD1-202ENST00000411552 GNPNAT1Q96EK6 184 aaPredicted RBP11.71□□□□□ -0.53
NOD1-202ENST00000411552 ODF3Q96PU9 254 aa11.71□□□□□ -0.53
NOD1-202ENST00000411552 Q9H3A6 140 aa11.71□□□□□ -0.53
NOD1-202ENST00000411552 IGKV2-40A0A087WW87 121 aaPredicted RBP11.7□□□□□ -0.54
NOD1-202ENST00000411552 LCE6AA0A183 80 aa11.7□□□□□ -0.54
NOD1-202ENST00000411552 ZNF705GA8MUZ8 300 aaPredicted RBP11.7□□□□□ -0.54
NOD1-202ENST00000411552 TAAR5O14804 337 aa11.7□□□□□ -0.54
NOD1-202ENST00000411552 IGKV2D-40P01614 121 aaPredicted RBP11.7□□□□□ -0.54
NOD1-202ENST00000411552 MBP02144 154 aa11.7□□□□□ -0.54
NOD1-202ENST00000411552 LYPD1Q8N2G4 141 aa11.7□□□□□ -0.54
NOD1-202ENST00000411552 TMEM256Q8N2U0 113 aa11.7□□□□□ -0.54
NOD1-202ENST00000411552 OR11H4Q8NGC9 324 aa11.7□□□□□ -0.54
NOD1-202ENST00000411552 RAB24Q969Q5 203 aa11.7□□□□□ -0.54
NOD1-202ENST00000411552 AGPAT4-IT1Q9H0P7 198 aa11.7□□□□□ -0.54
NOD1-202ENST00000411552 CYTL1Q9NRR1 136 aa11.7□□□□□ -0.54
NOD1-202ENST00000411552 KLK5Q9Y337 293 aaPredicted RBP11.7□□□□□ -0.54
NOD1-202ENST00000411552 RYR2Q92736 4967 aa11.69□□□□□ -0.54
NOD1-202ENST00000411552 JTBO76095 146 aa11.69□□□□□ -0.54
NOD1-202ENST00000411552 ARL14EPLP0DKL9 152 aa11.69□□□□□ -0.54
NOD1-202ENST00000411552 LEPP41159 167 aa11.69□□□□□ -0.54
NOD1-202ENST00000411552 C12orf74Q32Q52 190 aa11.69□□□□□ -0.54
NOD1-202ENST00000411552 GFI1BQ5VTD9 330 aa11.69□□□□□ -0.54
NOD1-202ENST00000411552 C9orf47Q6ZRZ4 202 aa11.69□□□□□ -0.54
NOD1-202ENST00000411552 Q6ZTC4 211 aa11.69□□□□□ -0.54
NOD1-202ENST00000411552 ZNF767PQ75MW2 155 aa11.69□□□□□ -0.54
NOD1-202ENST00000411552 LINC01587Q99440 93 aa11.69□□□□□ -0.54
NOD1-202ENST00000411552 VGLL1Q99990 258 aa11.69□□□□□ -0.54
NOD1-202ENST00000411552 HMSDA8MTL9 139 aa11.68□□□□□ -0.54
NOD1-202ENST00000411552 J3KRW8 73 aa11.68□□□□□ -0.54
NOD1-202ENST00000411552 STAG3L2P0CL84 134 aa11.68□□□□□ -0.54
NOD1-202ENST00000411552 STAG3L3P0CL85 134 aa11.68□□□□□ -0.54
NOD1-202ENST00000411552 SPART-AS1P0CW21 52 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms