RNA–Protein interactions for RNA: ENST00000409828.7

PAX3-208, Transcript of paired box 3, humanhuman

TSL 1 (best) BASIC

Gene PAX3, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-208ENST00000409828 RPUSD4Q96CM3 377 aaKnown RBP13.33□□□□□ -0.28
PAX3-208ENST00000409828 ZMAT4Q9H898 229 aa13.33□□□□□ -0.28
PAX3-208ENST00000409828 TMEM167BQ9NRX6 74 aa13.33□□□□□ -0.28
PAX3-208ENST00000409828 TP53TG1Q9Y2A0 90 aa13.33□□□□□ -0.28
PAX3-208ENST00000409828 TENM3Q9P273 2699 aa13.32□□□□□ -0.28
PAX3-208ENST00000409828 H3BTX0 84 aa13.32□□□□□ -0.28
PAX3-208ENST00000409828 ARL14EPLP0DKL9 152 aa13.32□□□□□ -0.28
PAX3-208ENST00000409828 RAB5CP51148 216 aa13.32□□□□□ -0.28
PAX3-208ENST00000409828 OR8A1Q8NGG7 326 aa13.32□□□□□ -0.28
PAX3-208ENST00000409828 BLNKQ8WV28 456 aa13.32□□□□□ -0.28
PAX3-208ENST00000409828 ASCL2Q99929 193 aa13.32□□□□□ -0.28
PAX3-208ENST00000409828 HLA-DMBP28068 263 aa13.31□□□□□ -0.28
PAX3-208ENST00000409828 ZNF726P1Q15940 193 aa13.31□□□□□ -0.28
PAX3-208ENST00000409828 C1QTNF4Q9BXJ3 329 aa13.31□□□□□ -0.28
PAX3-208ENST00000409828 F6UB75 175 aa13.3□□□□□ -0.28
PAX3-208ENST00000409828 GCHFRP30047 84 aa13.3□□□□□ -0.28
PAX3-208ENST00000409828 TMED6Q8WW62 240 aa13.3□□□□□ -0.28
PAX3-208ENST00000409828 PHYHIPLQ96FC7 376 aa13.3□□□□□ -0.28
PAX3-208ENST00000409828 PLA2G2EQ9NZK7 142 aa13.3□□□□□ -0.28
PAX3-208ENST00000409828 HMGB3O15347 200 aaKnown RBP13.29□□□□□ -0.28
PAX3-208ENST00000409828 CNN1P51911 297 aaKnown RBP13.29□□□□□ -0.28
PAX3-208ENST00000409828 DEFB1P60022 68 aa13.29□□□□□ -0.28
PAX3-208ENST00000409828 RANP62826 216 aaKnown RBP13.29□□□□□ -0.28
PAX3-208ENST00000409828 ICAM4Q14773 271 aa13.29□□□□□ -0.28
PAX3-208ENST00000409828 FAM74A1Q5RGS3 127 aa13.29□□□□□ -0.28
PAX3-208ENST00000409828 SSX7Q7RTT5 188 aa13.29□□□□□ -0.28
PAX3-208ENST00000409828 RXFP4Q8TDU9 374 aa13.29□□□□□ -0.28
PAX3-208ENST00000409828 MBD3L1Q8WWY6 194 aa13.29□□□□□ -0.28
PAX3-208ENST00000409828 OTORQ9NRC9 128 aa13.29□□□□□ -0.28
PAX3-208ENST00000409828 HUWE1Q7Z6Z7 4374 aaKnown RBP13.28□□□□□ -0.28
PAX3-208ENST00000409828 ZNF705FA8MVS1 300 aaPredicted RBP13.28□□□□□ -0.28
PAX3-208ENST00000409828 EIF3GO75821 320 aaKnown RBP eCLIP13.28□□□□□ -0.28
PAX3-208ENST00000409828 GIG44P09565 113 aaPredicted RBP13.28□□□□□ -0.28
PAX3-208ENST00000409828 AMTNQ6UX39 209 aa13.28□□□□□ -0.28
PAX3-208ENST00000409828 EXOC3-AS1Q8N2X6 119 aa13.28□□□□□ -0.28
PAX3-208ENST00000409828 OR4B1Q8NGF8 309 aa13.28□□□□□ -0.28
PAX3-208ENST00000409828 OR10J6PQ8NGY7 276 aa13.28□□□□□ -0.28
PAX3-208ENST00000409828 RNF183Q96D59 192 aa13.28□□□□□ -0.28
PAX3-208ENST00000409828 Q9H3A6 140 aa13.28□□□□□ -0.28
PAX3-208ENST00000409828 MAP1LC3B2A6NCE7 125 aa13.27□□□□□ -0.29
PAX3-208ENST00000409828 M0R3E3 92 aa13.27□□□□□ -0.29
PAX3-208ENST00000409828 CA1P00915 261 aaPredicted RBP13.27□□□□□ -0.29
PAX3-208ENST00000409828 AMBPP02760 352 aa13.27□□□□□ -0.29
PAX3-208ENST00000409828 CSN1S1P47710 185 aa13.27□□□□□ -0.29
PAX3-208ENST00000409828 SULT1A2P50226 295 aa13.27□□□□□ -0.29
PAX3-208ENST00000409828 ODF3Q96PU9 254 aa13.27□□□□□ -0.29
PAX3-208ENST00000409828 MAP1LC3BQ9GZQ8 125 aa13.27□□□□□ -0.29
PAX3-208ENST00000409828 A0A1W2PRE2 83 aa13.26□□□□□ -0.29
PAX3-208ENST00000409828 RBAKDNA6NC62 111 aa13.26□□□□□ -0.29
PAX3-208ENST00000409828 PRAC2D3DTV9 90 aa13.26□□□□□ -0.29
PAX3-208ENST00000409828 NPIPB6E9PJ23 425 aa13.26□□□□□ -0.29
PAX3-208ENST00000409828 SPRY2O43597 315 aa13.26□□□□□ -0.29
PAX3-208ENST00000409828 SLC25A5P05141 298 aaKnown RBP13.26□□□□□ -0.29
PAX3-208ENST00000409828 HIST1H1AQ02539 215 aaPredicted RBP13.26□□□□□ -0.29
PAX3-208ENST00000409828 CSNK1G2-AS1Q8NCQ2 148 aa13.26□□□□□ -0.29
PAX3-208ENST00000409828 RCHY1Q96PM5 261 aa13.26□□□□□ -0.29
PAX3-208ENST00000409828 OVOL2Q9BRP0 275 aa13.26□□□□□ -0.29
PAX3-208ENST00000409828 NKX6-2Q9C056 277 aaPredicted RBP13.26□□□□□ -0.29
PAX3-208ENST00000409828 U3KQK5 164 aa13.26□□□□□ -0.29
PAX3-208ENST00000409828 ARL2-SNX15V9GYD0 113 aa13.26□□□□□ -0.29
PAX3-208ENST00000409828 FHITP49789 147 aa13.25□□□□□ -0.29
PAX3-208ENST00000409828 NKX2-5P52952 324 aaPredicted RBP13.25□□□□□ -0.29
PAX3-208ENST00000409828 DEFB135Q30KP9 77 aa13.25□□□□□ -0.29
PAX3-208ENST00000409828 C9orf47Q6ZRZ4 202 aa13.25□□□□□ -0.29
PAX3-208ENST00000409828 FAM213BQ8TBF2 198 aa13.25□□□□□ -0.29
PAX3-208ENST00000409828 LINC00477Q96M19 166 aa13.25□□□□□ -0.29
PAX3-208ENST00000409828 TRAV1-1A0A0B4J248 108 aa13.24□□□□□ -0.29
PAX3-208ENST00000409828 PGPA6NDG6 321 aa13.24□□□□□ -0.29
PAX3-208ENST00000409828 H2AFB1P0C5Y9 115 aa13.24□□□□□ -0.29
PAX3-208ENST00000409828 TRBV7-9A0A0J9YWB2 115 aa13.23□□□□□ -0.29
PAX3-208ENST00000409828 SERTM2A0A1B0GWG4 89 aa13.23□□□□□ -0.29
PAX3-208ENST00000409828 BOLA2-SMG1P6H3BVE0 249 aa13.23□□□□□ -0.29
PAX3-208ENST00000409828 IGKV3-20P01619 116 aa13.23□□□□□ -0.29
PAX3-208ENST00000409828 ZNF705DP0CH99 300 aaPredicted RBP13.23□□□□□ -0.29
PAX3-208ENST00000409828 ZNF705BP0CI00 300 aaPredicted RBP13.23□□□□□ -0.29
PAX3-208ENST00000409828 C5orf17Q8NAS9 161 aa13.23□□□□□ -0.29
PAX3-208ENST00000409828 CMTM2Q8TAZ6 248 aa13.23□□□□□ -0.29
PAX3-208ENST00000409828 SFT2D1Q8WV19 159 aa13.23□□□□□ -0.29
PAX3-208ENST00000409828 SLC35B3Q9H1N7 401 aa13.23□□□□□ -0.29
PAX3-208ENST00000409828 PPP1R14DQ9NXH3 145 aa13.23□□□□□ -0.29
PAX3-208ENST00000409828 ZNF705EA8MWA4 302 aaPredicted RBP13.22□□□□□ -0.29
PAX3-208ENST00000409828 DIRC3C9JPN6 131 aa13.22□□□□□ -0.29
PAX3-208ENST00000409828 TEX46H3BTG2 121 aa13.22□□□□□ -0.29
PAX3-208ENST00000409828 TSPOP30536 169 aa13.22□□□□□ -0.29
PAX3-208ENST00000409828 PPT1P50897 306 aa13.22□□□□□ -0.29
PAX3-208ENST00000409828 FGF8P55075 233 aaPredicted RBP13.22□□□□□ -0.29
PAX3-208ENST00000409828 XCL2Q9UBD3 114 aa13.22□□□□□ -0.29
PAX3-208ENST00000409828 HBE1P02100 147 aa13.21□□□□□ -0.29
PAX3-208ENST00000409828 NMBP08949 121 aa13.21□□□□□ -0.29
PAX3-208ENST00000409828 CDKN1BP46527 198 aa13.21□□□□□ -0.29
PAX3-208ENST00000409828 IQCF2Q8IXL9 164 aa13.21□□□□□ -0.29
PAX3-208ENST00000409828 IGF2BP2-AS1Q96M15 143 aa13.21□□□□□ -0.29
PAX3-208ENST00000409828 TCEAL7Q9BRU2 100 aa13.21□□□□□ -0.29
PAX3-208ENST00000409828 AGPAT4-IT1Q9H0P7 198 aa13.21□□□□□ -0.29
PAX3-208ENST00000409828 TMPRSS5Q9H3S3 457 aa13.21□□□□□ -0.29
PAX3-208ENST00000409828 LENEPQ9Y5L5 61 aa13.21□□□□□ -0.29
PAX3-208ENST00000409828 FAM74A7A6NL05 159 aa13.2□□□□□ -0.3
PAX3-208ENST00000409828 CT45A10P0DMU9 189 aa13.2□□□□□ -0.3
PAX3-208ENST00000409828 SUMO1P63165 101 aaKnown RBP13.2□□□□□ -0.3
PAX3-208ENST00000409828 PMS2P11Q13670 270 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms