RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 LINC00269Q8N2A0 174 aa-0.12□□□□□ -2.43
PMS1-203ENST00000409593 LRRC18Q8N456 261 aa-0.12□□□□□ -2.43
PMS1-203ENST00000409593 RMND5BQ96G75 393 aaPredicted RBP-0.12□□□□□ -2.43
PMS1-203ENST00000409593 CACYBPQ9HB71 228 aaKnown RBP-0.12□□□□□ -2.43
PMS1-203ENST00000409593 TAF9BQ9HBM6 251 aa-0.12□□□□□ -2.43
PMS1-203ENST00000409593 HSPB8Q9UJY1 196 aa-0.12□□□□□ -2.43
PMS1-203ENST00000409593 PRNDQ9UKY0 176 aa-0.12□□□□□ -2.43
PMS1-203ENST00000409593 RNF11Q9Y3C5 154 aa-0.12□□□□□ -2.43
PMS1-203ENST00000409593 DMBT1Q9UGM3 2413 aaPredicted RBP-0.12□□□□□ -2.43
PMS1-203ENST00000409593 PTPRDP23468 1912 aa-0.13□□□□□ -2.43
PMS1-203ENST00000409593 SPTBP11277 2137 aa-0.13□□□□□ -2.43
PMS1-203ENST00000409593 A0A0J9YY99 117 aa-0.13□□□□□ -2.43
PMS1-203ENST00000409593 RER1O15258 196 aa-0.13□□□□□ -2.43
PMS1-203ENST00000409593 PIAS1O75925 651 aa-0.13□□□□□ -2.43
PMS1-203ENST00000409593 VBP1P61758 197 aa-0.13□□□□□ -2.43
PMS1-203ENST00000409593 SPA17Q15506 151 aa-0.13□□□□□ -2.43
PMS1-203ENST00000409593 CARD19Q96LW7 228 aa-0.13□□□□□ -2.43
PMS1-203ENST00000409593 SS18L2Q9UHA2 77 aa-0.13□□□□□ -2.43
PMS1-203ENST00000409593 ARL2BPQ9Y2Y0 163 aa-0.13□□□□□ -2.43
PMS1-203ENST00000409593 NCAPD3P42695 1498 aa-0.13□□□□□ -2.43
PMS1-203ENST00000409593 PTPRZ1P23471 2315 aaPredicted RBP-0.13□□□□□ -2.43
PMS1-203ENST00000409593 HSD11B1P28845 292 aa-0.14□□□□□ -2.43
PMS1-203ENST00000409593 DHRS4L2Q6PKH6 230 aa-0.14□□□□□ -2.43
PMS1-203ENST00000409593 SPINK6Q6UWN8 80 aa-0.14□□□□□ -2.43
PMS1-203ENST00000409593 PHF5AQ7RTV0 110 aaKnown RBP-0.14□□□□□ -2.43
PMS1-203ENST00000409593 ZNF714Q96N38 554 aa-0.14□□□□□ -2.43
PMS1-203ENST00000409593 PAIP2Q9BPZ3 127 aaKnown RBP-0.14□□□□□ -2.43
PMS1-203ENST00000409593 OR2J1Q9GZK6 312 aa-0.14□□□□□ -2.43
PMS1-203ENST00000409593 TCEAL2Q9H3H9 227 aaPredicted RBP-0.14□□□□□ -2.43
PMS1-203ENST00000409593 STAB1Q9NY15 2570 aa-0.14□□□□□ -2.43
PMS1-203ENST00000409593 HIST1H2BKO60814 126 aa-0.14□□□□□ -2.43
PMS1-203ENST00000409593 CSN2P05814 226 aa-0.14□□□□□ -2.43
PMS1-203ENST00000409593 HIST1H2BJP06899 126 aa-0.14□□□□□ -2.43
PMS1-203ENST00000409593 REEP5Q00765 189 aa-0.14□□□□□ -2.43
PMS1-203ENST00000409593 LINC00299Q6ZSB3 139 aa-0.14□□□□□ -2.43
PMS1-203ENST00000409593 MALSU1Q96EH3 234 aa-0.14□□□□□ -2.43
PMS1-203ENST00000409593 PYCARDQ9ULZ3 195 aa-0.14□□□□□ -2.43
PMS1-203ENST00000409593 NCOR2Q9Y618 2525 aa-0.15□□□□□ -2.43
PMS1-203ENST00000409593 UHRF1BP1Q6BDS2 1440 aa-0.15□□□□□ -2.43
PMS1-203ENST00000409593 TRAV5A0A0B4J249 113 aa-0.15□□□□□ -2.43
PMS1-203ENST00000409593 A6NN06 94 aa-0.15□□□□□ -2.43
PMS1-203ENST00000409593 RIIAD1A6NNX1 92 aa-0.15□□□□□ -2.43
PMS1-203ENST00000409593 MFSD11O43934 449 aa-0.15□□□□□ -2.43
PMS1-203ENST00000409593 NDUFC2O95298 119 aa-0.15□□□□□ -2.43
PMS1-203ENST00000409593 HBBP68871 147 aa-0.15□□□□□ -2.43
PMS1-203ENST00000409593 QRFPP83859 136 aa-0.15□□□□□ -2.43
PMS1-203ENST00000409593 SNCBQ16143 134 aa-0.15□□□□□ -2.43
PMS1-203ENST00000409593 C1orf140Q5VVS0 124 aa-0.15□□□□□ -2.43
PMS1-203ENST00000409593 C10orf99Q6UWK7 81 aa-0.15□□□□□ -2.43
PMS1-203ENST00000409593 PXT1Q8NFP0 134 aa-0.15□□□□□ -2.43
PMS1-203ENST00000409593 CST11Q9H112 138 aa-0.15□□□□□ -2.43
PMS1-203ENST00000409593 SH3BGRL3Q9H299 93 aa-0.15□□□□□ -2.43
PMS1-203ENST00000409593 CACNA1HO95180 2353 aa-0.16□□□□□ -2.43
PMS1-203ENST00000409593 RTL9Q8NET4 1388 aa-0.16□□□□□ -2.43
PMS1-203ENST00000409593 TMEM210A6NLX4 147 aa-0.16□□□□□ -2.44
PMS1-203ENST00000409593 G3V2T6 193 aa-0.16□□□□□ -2.44
PMS1-203ENST00000409593 H7C1C5 153 aa-0.16□□□□□ -2.44
PMS1-203ENST00000409593 CST7O76096 145 aa-0.16□□□□□ -2.44
PMS1-203ENST00000409593 IFNA4P05014 189 aa-0.16□□□□□ -2.44
PMS1-203ENST00000409593 LCN6P62502 163 aa-0.16□□□□□ -2.44
PMS1-203ENST00000409593 DIAPH2-AS1Q14236 149 aa-0.16□□□□□ -2.44
PMS1-203ENST00000409593 POU6F1Q14863 301 aa-0.16□□□□□ -2.44
PMS1-203ENST00000409593 GLYATL3Q5SZD4 288 aa-0.16□□□□□ -2.44
PMS1-203ENST00000409593 C10orf111Q8N326 155 aa-0.16□□□□□ -2.44
PMS1-203ENST00000409593 FAM216BQ8N7L0 139 aa-0.16□□□□□ -2.44
PMS1-203ENST00000409593 CCL4L1Q8NHW4 92 aa-0.16□□□□□ -2.44
PMS1-203ENST00000409593 LPAR5Q9H1C0 372 aa-0.16□□□□□ -2.44
PMS1-203ENST00000409593 LYRM2Q9NU23 88 aaPredicted RBP-0.16□□□□□ -2.44
PMS1-203ENST00000409593 BOKQ9UMX3 212 aaPredicted RBP-0.16□□□□□ -2.44
PMS1-203ENST00000409593 IGF2RP11717 2491 aa-0.16□□□□□ -2.44
PMS1-203ENST00000409593 ABCA12Q86UK0 2595 aa-0.16□□□□□ -2.44
PMS1-203ENST00000409593 PIK3C2AO00443 1686 aa-0.16□□□□□ -2.44
PMS1-203ENST00000409593 RYR3Q15413 4870 aa-0.16□□□□□ -2.44
PMS1-203ENST00000409593 RNF213Q63HN8 5207 aa-0.16□□□□□ -2.44
PMS1-203ENST00000409593 CAMSAP2Q08AD1 1489 aa-0.16□□□□□ -2.44
PMS1-203ENST00000409593 POLQO75417 2590 aa-0.17□□□□□ -2.44
PMS1-203ENST00000409593 A0A096LPI6 279 aa-0.17□□□□□ -2.44
PMS1-203ENST00000409593 NBDYA0A0U1RRE5 68 aa-0.17□□□□□ -2.44
PMS1-203ENST00000409593 ATG12O94817 140 aa-0.17□□□□□ -2.44
PMS1-203ENST00000409593 IFNA14P01570 189 aa-0.17□□□□□ -2.44
PMS1-203ENST00000409593 IGHV3-30P01768 117 aa-0.17□□□□□ -2.44
PMS1-203ENST00000409593 IGHV3-30-5P0DP03 117 aa-0.17□□□□□ -2.44
PMS1-203ENST00000409593 OGNP20774 298 aaKnown RBP-0.17□□□□□ -2.44
PMS1-203ENST00000409593 PHBP35232 272 aa-0.17□□□□□ -2.44
PMS1-203ENST00000409593 FXYD6P3P58550 94 aa-0.17□□□□□ -2.44
PMS1-203ENST00000409593 RPL37P61927 97 aaKnown RBP-0.17□□□□□ -2.44
PMS1-203ENST00000409593 LTC4SQ16873 150 aa-0.17□□□□□ -2.44
PMS1-203ENST00000409593 KRTAP6-1Q3LI64 71 aa-0.17□□□□□ -2.44
PMS1-203ENST00000409593 FKBP1CQ5VVH2 108 aa-0.17□□□□□ -2.44
PMS1-203ENST00000409593 LYG2Q86SG7 212 aa-0.17□□□□□ -2.44
PMS1-203ENST00000409593 LINC00208Q96KT6 92 aa-0.17□□□□□ -2.44
PMS1-203ENST00000409593 PHB2Q99623 299 aa-0.17□□□□□ -2.44
PMS1-203ENST00000409593 GINS3Q9BRX5 216 aa-0.17□□□□□ -2.44
PMS1-203ENST00000409593 RTL8AQ9BWD3 113 aa-0.17□□□□□ -2.44
PMS1-203ENST00000409593 MAP1LC3BQ9GZQ8 125 aa-0.17□□□□□ -2.44
PMS1-203ENST00000409593 OTORQ9NRC9 128 aa-0.17□□□□□ -2.44
PMS1-203ENST00000409593 NAT8BQ9UHF3 227 aa-0.17□□□□□ -2.44
PMS1-203ENST00000409593 BCORL1Q5H9F3 1711 aa-0.17□□□□□ -2.44
PMS1-203ENST00000409593 A0A1W2PRS3 328 aa-0.18□□□□□ -2.44
PMS1-203ENST00000409593 AIPO00170 330 aa-0.18□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms