RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 ZNF253O75346 499 aa13.93□□□□□ -0.18
TSPAN4-209ENST00000409543 P0DMU3 169 aa13.93□□□□□ -0.18
TSPAN4-209ENST00000409543 FAM231AP0DMU4 169 aa13.93□□□□□ -0.18
TSPAN4-209ENST00000409543 FAM231CP0DMU5 169 aa13.93□□□□□ -0.18
TSPAN4-209ENST00000409543 DAD1P61803 113 aa13.93□□□□□ -0.18
TSPAN4-209ENST00000409543 LRRC37A5PQ49AS3 106 aa13.93□□□□□ -0.18
TSPAN4-209ENST00000409543 OR5C1Q8NGR4 320 aa13.93□□□□□ -0.18
TSPAN4-209ENST00000409543 LINC01587Q99440 93 aa13.93□□□□□ -0.18
TSPAN4-209ENST00000409543 BATF3Q9NR55 127 aa13.93□□□□□ -0.18
TSPAN4-209ENST00000409543 ZNF586Q9NXT0 402 aa13.93□□□□□ -0.18
TSPAN4-209ENST00000409543 TMEM14CQ9P0S9 112 aa13.93□□□□□ -0.18
TSPAN4-209ENST00000409543 DNAH10Q8IVF4 4471 aa13.92□□□□□ -0.18
TSPAN4-209ENST00000409543 DNAH6Q9C0G6 4158 aa13.92□□□□□ -0.18
TSPAN4-209ENST00000409543 LYRM9A8MSI8 78 aa13.92□□□□□ -0.18
TSPAN4-209ENST00000409543 AZU1P20160 251 aa13.92□□□□□ -0.18
TSPAN4-209ENST00000409543 H2BFSP57053 126 aa13.92□□□□□ -0.18
TSPAN4-209ENST00000409543 TAS2R60P59551 318 aa13.92□□□□□ -0.18
TSPAN4-209ENST00000409543 THAP6Q8TBB0 222 aa13.91□□□□□ -0.18
TSPAN4-209ENST00000409543 TRBV19A0A075B6N1 114 aa13.9□□□□□ -0.18
TSPAN4-209ENST00000409543 PLAC8L1A1L4L8 177 aa13.9□□□□□ -0.18
TSPAN4-209ENST00000409543 HIST1H1EP10412 219 aaKnown RBP13.9□□□□□ -0.18
TSPAN4-209ENST00000409543 HTN3P15516 51 aa13.9□□□□□ -0.18
TSPAN4-209ENST00000409543 POM121L12Q8N7R1 296 aa13.9□□□□□ -0.18
TSPAN4-209ENST00000409543 PPP1R1CQ8WVI7 109 aa13.9□□□□□ -0.18
TSPAN4-209ENST00000409543 C20orf144Q9BQM9 153 aa13.9□□□□□ -0.18
TSPAN4-209ENST00000409543 FRAS1Q86XX4 4008 aa13.9□□□□□ -0.18
TSPAN4-209ENST00000409543 H7BYZ3 331 aa13.89□□□□□ -0.19
TSPAN4-209ENST00000409543 SSNA1O43805 119 aa13.89□□□□□ -0.19
TSPAN4-209ENST00000409543 CLINT1Q14677 625 aa13.89□□□□□ -0.19
TSPAN4-209ENST00000409543 GCSAMLQ5JQS6 135 aa13.89□□□□□ -0.19
TSPAN4-209ENST00000409543 MRPL53Q96EL3 112 aaKnown RBP13.89□□□□□ -0.19
TSPAN4-209ENST00000409543 NPIPB6E9PJ23 425 aa13.88□□□□□ -0.19
TSPAN4-209ENST00000409543 HTN1P15515 57 aa13.88□□□□□ -0.19
TSPAN4-209ENST00000409543 PDE6HQ13956 83 aa13.88□□□□□ -0.19
TSPAN4-209ENST00000409543 ZNF493Q6ZR52 646 aa13.88□□□□□ -0.19
TSPAN4-209ENST00000409543 C16orf74Q96GX8 76 aa13.88□□□□□ -0.19
TSPAN4-209ENST00000409543 ODF3Q96PU9 254 aa13.88□□□□□ -0.19
TSPAN4-209ENST00000409543 WDR61Q9GZS3 305 aaKnown RBP13.88□□□□□ -0.19
TSPAN4-209ENST00000409543 KCNIP2Q9NS61 270 aa13.88□□□□□ -0.19
TSPAN4-209ENST00000409543 PRELID1Q9Y255 219 aa13.88□□□□□ -0.19
TSPAN4-209ENST00000409543 NDUFB4O95168 129 aa13.87□□□□□ -0.19
TSPAN4-209ENST00000409543 MPC2O95563 127 aa13.87□□□□□ -0.19
TSPAN4-209ENST00000409543 CT45A10P0DMU9 189 aa13.87□□□□□ -0.19
TSPAN4-209ENST00000409543 PYYP10082 97 aa13.87□□□□□ -0.19
TSPAN4-209ENST00000409543 KIR3DS1Q14943 382 aa13.87□□□□□ -0.19
TSPAN4-209ENST00000409543 PARD6GQ9BYG4 376 aaPredicted RBP13.87□□□□□ -0.19
TSPAN4-209ENST00000409543 TIMM9Q9Y5J7 89 aa13.87□□□□□ -0.19
TSPAN4-209ENST00000409543 PET100P0DJ07 73 aa13.86□□□□□ -0.19
TSPAN4-209ENST00000409543 DEFB130BP0DP73 79 aa13.86□□□□□ -0.19
TSPAN4-209ENST00000409543 DEFB130AP0DP74 79 aa13.86□□□□□ -0.19
TSPAN4-209ENST00000409543 LEPP41159 167 aa13.86□□□□□ -0.19
TSPAN4-209ENST00000409543 GFI1BQ5VTD9 330 aa13.86□□□□□ -0.19
TSPAN4-209ENST00000409543 TMEM88Q6PEY1 159 aa13.86□□□□□ -0.19
TSPAN4-209ENST00000409543 FAM167A-AS1Q96KT0 104 aa13.86□□□□□ -0.19
TSPAN4-209ENST00000409543 SLC25A2Q9BXI2 301 aa13.86□□□□□ -0.19
TSPAN4-209ENST00000409543 TIMM8BQ9Y5J9 83 aaPredicted RBP13.86□□□□□ -0.19
TSPAN4-209ENST00000409543 C17orf112F2Z3M2 114 aa13.85□□□□□ -0.19
TSPAN4-209ENST00000409543 M0R3E3 92 aa13.85□□□□□ -0.19
TSPAN4-209ENST00000409543 FCN2Q15485 313 aa13.85□□□□□ -0.19
TSPAN4-209ENST00000409543 MIR17HGQ75NE6 70 aa13.85□□□□□ -0.19
TSPAN4-209ENST00000409543 RNASE8Q8TDE3 154 aaKnown RBP13.85□□□□□ -0.19
TSPAN4-209ENST00000409543 TMEM263Q8WUH6 116 aaKnown RBP13.85□□□□□ -0.19
TSPAN4-209ENST00000409543 ATP5SQ99766 215 aa13.85□□□□□ -0.19
TSPAN4-209ENST00000409543 CBY3A6NI87 242 aa13.84□□□□□ -0.19
TSPAN4-209ENST00000409543 BLNKQ8WV28 456 aa13.84□□□□□ -0.19
TSPAN4-209ENST00000409543 MRPL32Q9BYC8 188 aaKnown RBP13.84□□□□□ -0.19
TSPAN4-209ENST00000409543 AAMDCQ9H7C9 122 aa13.84□□□□□ -0.19
TSPAN4-209ENST00000409543 HSPB11Q9Y547 144 aa13.84□□□□□ -0.19
TSPAN4-209ENST00000409543 CCDC28AQ8IWP9 274 aa13.83□□□□□ -0.2
TSPAN4-209ENST00000409543 EXOC3-AS1Q8N2X6 119 aa13.83□□□□□ -0.2
TSPAN4-209ENST00000409543 C15orf53Q8NAA6 179 aa13.83□□□□□ -0.2
TSPAN4-209ENST00000409543 LINC00477Q96M19 166 aa13.83□□□□□ -0.2
TSPAN4-209ENST00000409543 OR51M1Q9H341 326 aa13.83□□□□□ -0.2
TSPAN4-209ENST00000409543 ATP5G1P05496 136 aa13.82□□□□□ -0.2
TSPAN4-209ENST00000409543 NBEAP1P0C6P0 100 aa13.82□□□□□ -0.2
TSPAN4-209ENST00000409543 RPL12P30050 165 aaKnown RBP13.82□□□□□ -0.2
TSPAN4-209ENST00000409543 ATP5G3P48201 142 aa13.82□□□□□ -0.2
TSPAN4-209ENST00000409543 RNF212Q495C1 297 aa13.82□□□□□ -0.2
TSPAN4-209ENST00000409543 UBE2DNLQ8IWF7 75 aa13.82□□□□□ -0.2
TSPAN4-209ENST00000409543 NOP10Q9NPE3 64 aaKnown RBP13.82□□□□□ -0.2
TSPAN4-209ENST00000409543 FUT9Q9Y231 359 aa13.82□□□□□ -0.2
TSPAN4-209ENST00000409543 TRAV12-3A0A0B4J271 114 aa13.81□□□□□ -0.2
TSPAN4-209ENST00000409543 J3KRW8 73 aa13.81□□□□□ -0.2
TSPAN4-209ENST00000409543 SLC25A5P05141 298 aaKnown RBP13.81□□□□□ -0.2
TSPAN4-209ENST00000409543 ERCC8Q13216 396 aa13.81□□□□□ -0.2
TSPAN4-209ENST00000409543 ICAM4Q14773 271 aa13.81□□□□□ -0.2
TSPAN4-209ENST00000409543 FAM19A4Q96LR4 140 aa13.81□□□□□ -0.2
TSPAN4-209ENST00000409543 PYGO2Q9BRQ0 406 aa13.81□□□□□ -0.2
TSPAN4-209ENST00000409543 PAXXQ9BUH6 204 aa13.81□□□□□ -0.2
TSPAN4-209ENST00000409543 AGPAT4-IT1Q9H0P7 198 aa13.81□□□□□ -0.2
TSPAN4-209ENST00000409543 MBD2Q9UBB5 411 aa13.81□□□□□ -0.2
TSPAN4-209ENST00000409543 F5H768 121 aa13.8□□□□□ -0.2
TSPAN4-209ENST00000409543 IFNA5P01569 189 aa13.8□□□□□ -0.2
TSPAN4-209ENST00000409543 SCGB1C1Q8TD33 95 aa13.8□□□□□ -0.2
TSPAN4-209ENST00000409543 RNF141Q8WVD5 230 aa13.8□□□□□ -0.2
TSPAN4-209ENST00000409543 FXYD5Q96DB9 178 aa13.8□□□□□ -0.2
TSPAN4-209ENST00000409543 LGALS9BQ3B8N2 356 aa13.79□□□□□ -0.2
TSPAN4-209ENST00000409543 FFAR4Q5NUL3 377 aa13.79□□□□□ -0.2
TSPAN4-209ENST00000409543 C9orf47Q6ZRZ4 202 aa13.79□□□□□ -0.2
TSPAN4-209ENST00000409543 LINC00612Q8N6U2 182 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 147.4 ms