RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 EXOC3-AS1Q8N2X6 119 aa12.29□□□□□ -0.44
TSPAN4-208ENST00000409531 RNF182Q8N6D2 247 aa12.29□□□□□ -0.44
TSPAN4-208ENST00000409531 ZNF738Q8NE65 137 aa12.29□□□□□ -0.44
TSPAN4-208ENST00000409531 CMTM2Q8TAZ6 248 aa12.29□□□□□ -0.44
TSPAN4-208ENST00000409531 RXFP4Q8TDU9 374 aa12.29□□□□□ -0.44
TSPAN4-208ENST00000409531 GNG13Q9P2W3 67 aa12.29□□□□□ -0.44
TSPAN4-208ENST00000409531 PGPA6NDG6 321 aa12.28□□□□□ -0.44
TSPAN4-208ENST00000409531 FAM74A7A6NL05 159 aa12.28□□□□□ -0.44
TSPAN4-208ENST00000409531 RGS13O14921 159 aa12.28□□□□□ -0.44
TSPAN4-208ENST00000409531 CST9LP1Q5W188 147 aa12.28□□□□□ -0.44
TSPAN4-208ENST00000409531 ARL6IP6Q8N6S5 226 aa12.28□□□□□ -0.44
TSPAN4-208ENST00000409531 B9D2Q9BPU9 175 aa12.28□□□□□ -0.44
TSPAN4-208ENST00000409531 TXNDC17Q9BRA2 123 aa12.28□□□□□ -0.44
TSPAN4-208ENST00000409531 NBEAL2Q6ZNJ1 2754 aa12.28□□□□□ -0.44
TSPAN4-208ENST00000409531 PAGE4O60829 102 aa12.27□□□□□ -0.45
TSPAN4-208ENST00000409531 HLA-DMBP28068 263 aa12.27□□□□□ -0.45
TSPAN4-208ENST00000409531 SUMO1P63165 101 aaKnown RBP12.27□□□□□ -0.45
TSPAN4-208ENST00000409531 C5orf17Q8NAS9 161 aa12.27□□□□□ -0.45
TSPAN4-208ENST00000409531 RPUSD4Q96CM3 377 aaKnown RBP12.27□□□□□ -0.45
TSPAN4-208ENST00000409531 C20orf173Q96LM9 149 aa12.27□□□□□ -0.45
TSPAN4-208ENST00000409531 TCEAL7Q9BRU2 100 aa12.27□□□□□ -0.45
TSPAN4-208ENST00000409531 YTHDF2Q9Y5A9 579 aaKnown RBP12.27□□□□□ -0.45
TSPAN4-208ENST00000409531 GGTLC3B5MD39 225 aa12.26□□□□□ -0.45
TSPAN4-208ENST00000409531 SLC25A5P05141 298 aaKnown RBP12.26□□□□□ -0.45
TSPAN4-208ENST00000409531 CLLU1Q5K131 121 aa12.26□□□□□ -0.45
TSPAN4-208ENST00000409531 EBLN2Q6P2I7 272 aa12.26□□□□□ -0.45
TSPAN4-208ENST00000409531 PCNPQ8WW12 178 aaKnown RBP12.26□□□□□ -0.45
TSPAN4-208ENST00000409531 C19orf73Q9NVV2 129 aa12.26□□□□□ -0.45
TSPAN4-208ENST00000409531 M0R3E3 92 aa12.25□□□□□ -0.45
TSPAN4-208ENST00000409531 BCL2P10415 239 aa12.25□□□□□ -0.45
TSPAN4-208ENST00000409531 FOXI2Q6ZQN5 318 aa12.25□□□□□ -0.45
TSPAN4-208ENST00000409531 Q8N1Y9 231 aa12.25□□□□□ -0.45
TSPAN4-208ENST00000409531 SERTM2A0A1B0GWG4 89 aa12.24□□□□□ -0.45
TSPAN4-208ENST00000409531 ZNF705FA8MVS1 300 aaPredicted RBP12.24□□□□□ -0.45
TSPAN4-208ENST00000409531 C11orf94C9JXX5 98 aa12.24□□□□□ -0.45
TSPAN4-208ENST00000409531 F6UZH7 168 aa12.24□□□□□ -0.45
TSPAN4-208ENST00000409531 K7EQM0 130 aa12.24□□□□□ -0.45
TSPAN4-208ENST00000409531 APRG1Q8IVJ8 170 aa12.24□□□□□ -0.45
TSPAN4-208ENST00000409531 OR10J6PQ8NGY7 276 aa12.24□□□□□ -0.45
TSPAN4-208ENST00000409531 SAV1Q9H4B6 383 aaPredicted RBP12.24□□□□□ -0.45
TSPAN4-208ENST00000409531 VAX2Q9UIW0 290 aa12.24□□□□□ -0.45
TSPAN4-208ENST00000409531 AGRNO00468 2067 aa12.24□□□□□ -0.45
TSPAN4-208ENST00000409531 RBFOX3A6NFN3 312 aa12.23□□□□□ -0.45
TSPAN4-208ENST00000409531 DIRC3C9JPN6 131 aa12.23□□□□□ -0.45
TSPAN4-208ENST00000409531 DUSP14O95147 198 aaKnown RBP12.23□□□□□ -0.45
TSPAN4-208ENST00000409531 MEF2BQ02080 365 aaPredicted RBP12.23□□□□□ -0.45
TSPAN4-208ENST00000409531 HAGHQ16775 308 aa12.23□□□□□ -0.45
TSPAN4-208ENST00000409531 STHQ8IWL8 128 aa12.23□□□□□ -0.45
TSPAN4-208ENST00000409531 HIST1H2BAQ96A08 127 aa12.23□□□□□ -0.45
TSPAN4-208ENST00000409531 FAM210AQ96ND0 272 aa12.23□□□□□ -0.45
TSPAN4-208ENST00000409531 EPDR1Q9UM22 224 aa12.23□□□□□ -0.45
TSPAN4-208ENST00000409531 A0A0J9YX75 114 aa12.22□□□□□ -0.45
TSPAN4-208ENST00000409531 LOC102723971A0A1B0GUV8 181 aa12.22□□□□□ -0.45
TSPAN4-208ENST00000409531 RBAKDNA6NC62 111 aa12.22□□□□□ -0.45
TSPAN4-208ENST00000409531 NHLRC4P0CG21 123 aaPredicted RBP12.22□□□□□ -0.45
TSPAN4-208ENST00000409531 HLA-DRB4P13762 266 aa12.22□□□□□ -0.45
TSPAN4-208ENST00000409531 ATP5G3P48201 142 aa12.22□□□□□ -0.45
TSPAN4-208ENST00000409531 ACTL10Q5JWF8 245 aa12.22□□□□□ -0.45
TSPAN4-208ENST00000409531 CCDC28AQ8IWP9 274 aa12.22□□□□□ -0.45
TSPAN4-208ENST00000409531 DEFB125Q8N687 156 aa12.22□□□□□ -0.45
TSPAN4-208ENST00000409531 OR8A1Q8NGG7 326 aa12.22□□□□□ -0.45
TSPAN4-208ENST00000409531 ATG101Q9BSB4 218 aa12.22□□□□□ -0.45
TSPAN4-208ENST00000409531 EIF5A2Q9GZV4 153 aaKnown RBP12.22□□□□□ -0.45
TSPAN4-208ENST00000409531 RPH3ALQ9UNE2 315 aa12.22□□□□□ -0.45
TSPAN4-208ENST00000409531 HLA-DRB4X5D2U9 266 aa12.22□□□□□ -0.45
TSPAN4-208ENST00000409531 PDE6DO43924 150 aa12.21□□□□□ -0.45
TSPAN4-208ENST00000409531 TCRAP04437 139 aa12.21□□□□□ -0.45
TSPAN4-208ENST00000409531 HIST1H1AQ02539 215 aaPredicted RBP12.21□□□□□ -0.45
TSPAN4-208ENST00000409531 ZNF506Q5JVG8 444 aa12.21□□□□□ -0.45
TSPAN4-208ENST00000409531 CYB561D1Q8N8Q1 229 aa12.21□□□□□ -0.45
TSPAN4-208ENST00000409531 WFDC10AQ9H1F0 79 aa12.21□□□□□ -0.45
TSPAN4-208ENST00000409531 TUBA4BQ9H853 241 aa12.21□□□□□ -0.45
TSPAN4-208ENST00000409531 SRD5A3Q9H8P0 318 aa12.21□□□□□ -0.45
TSPAN4-208ENST00000409531 FBLL1A6NHQ2 334 aaKnown RBP12.2□□□□□ -0.46
TSPAN4-208ENST00000409531 KNCNA6PVL3 124 aa12.2□□□□□ -0.46
TSPAN4-208ENST00000409531 A8MZ25 164 aa12.2□□□□□ -0.46
TSPAN4-208ENST00000409531 PRAC2D3DTV9 90 aa12.2□□□□□ -0.46
TSPAN4-208ENST00000409531 F6UB75 175 aa12.2□□□□□ -0.46
TSPAN4-208ENST00000409531 H3BMM0 161 aa12.2□□□□□ -0.46
TSPAN4-208ENST00000409531 PEX7O00628 323 aa12.2□□□□□ -0.46
TSPAN4-208ENST00000409531 GNG5P63218 68 aa12.2□□□□□ -0.46
TSPAN4-208ENST00000409531 ZNF124Q15973 351 aa12.2□□□□□ -0.46
TSPAN4-208ENST00000409531 TOR2AQ5JU69 321 aa12.2□□□□□ -0.46
TSPAN4-208ENST00000409531 GOLT1AQ6ZVE7 132 aa12.2□□□□□ -0.46
TSPAN4-208ENST00000409531 CLUHP3Q96NS8 147 aa12.2□□□□□ -0.46
TSPAN4-208ENST00000409531 KMT2CQ8NEZ4 4911 aaKnown RBP12.19□□□□□ -0.46
TSPAN4-208ENST00000409531 IGKV2-40A0A087WW87 121 aaPredicted RBP12.19□□□□□ -0.46
TSPAN4-208ENST00000409531 NDUFS6O75380 124 aaKnown RBP12.19□□□□□ -0.46
TSPAN4-208ENST00000409531 IGKV2D-40P01614 121 aaPredicted RBP12.19□□□□□ -0.46
TSPAN4-208ENST00000409531 FRMD6-AS1P0C7T7 363 aa12.19□□□□□ -0.46
TSPAN4-208ENST00000409531 IGHV4-30-4P0DP06 118 aa12.19□□□□□ -0.46
TSPAN4-208ENST00000409531 CNN1P51911 297 aaKnown RBP12.19□□□□□ -0.46
TSPAN4-208ENST00000409531 DEFB1P60022 68 aa12.19□□□□□ -0.46
TSPAN4-208ENST00000409531 TMEM78Q5T7P6 136 aa12.19□□□□□ -0.46
TSPAN4-208ENST00000409531 GDF5OSQ5U4N7 250 aa12.19□□□□□ -0.46
TSPAN4-208ENST00000409531 C9orf47Q6ZRZ4 202 aa12.19□□□□□ -0.46
TSPAN4-208ENST00000409531 OR4B1Q8NGF8 309 aa12.19□□□□□ -0.46
TSPAN4-208ENST00000409531 LINC00477Q96M19 166 aa12.19□□□□□ -0.46
TSPAN4-208ENST00000409531 ASCL2Q99929 193 aa12.19□□□□□ -0.46
TSPAN4-208ENST00000409531 RARRES2Q99969 163 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms