RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 ADAMTS9Q9P2N4 1935 aa13.4□□□□□ -0.26
PCDHA13-202ENST00000409494 FSTL3O95633 263 aa13.4□□□□□ -0.26
PCDHA13-202ENST00000409494 ATP6V0BQ99437 205 aa13.4□□□□□ -0.26
PCDHA13-202ENST00000409494 TRAV8-6A0A0B4J262 113 aa13.39□□□□□ -0.27
PCDHA13-202ENST00000409494 IGKV3OR2-268A0A0C4DH90 116 aa13.39□□□□□ -0.27
PCDHA13-202ENST00000409494 GUSBP1Q15486 140 aa13.39□□□□□ -0.27
PCDHA13-202ENST00000409494 COL4A3Q01955 1670 aa13.39□□□□□ -0.27
PCDHA13-202ENST00000409494 PTPRQQ9UMZ3 2332 aa13.39□□□□□ -0.27
PCDHA13-202ENST00000409494 IGHV4-61A0A0C4DH41 118 aa13.39□□□□□ -0.27
PCDHA13-202ENST00000409494 CENPVL3A0A0U1RRI6 287 aa13.39□□□□□ -0.27
PCDHA13-202ENST00000409494 MAPK1IP1LQ8NDC0 245 aa13.39□□□□□ -0.27
PCDHA13-202ENST00000409494 ZNRD1Q9P1U0 126 aa13.39□□□□□ -0.27
PCDHA13-202ENST00000409494 G3V318 75 aa13.39□□□□□ -0.27
PCDHA13-202ENST00000409494 WT1-ASQ06250 92 aa13.39□□□□□ -0.27
PCDHA13-202ENST00000409494 CT83Q5H943 113 aa13.39□□□□□ -0.27
PCDHA13-202ENST00000409494 CNTFRP26992 372 aa13.39□□□□□ -0.27
PCDHA13-202ENST00000409494 FOXC2Q99958 501 aa13.39□□□□□ -0.27
PCDHA13-202ENST00000409494 DEFB131AP59861 70 aa13.38□□□□□ -0.27
PCDHA13-202ENST00000409494 ZNF124Q15973 351 aa13.38□□□□□ -0.27
PCDHA13-202ENST00000409494 NPBQ8NG41 125 aa13.38□□□□□ -0.27
PCDHA13-202ENST00000409494 DOCK11Q5JSL3 2073 aa13.38□□□□□ -0.27
PCDHA13-202ENST00000409494 LURAP1LQ8IV03 231 aa13.38□□□□□ -0.27
PCDHA13-202ENST00000409494 SH2D1AO60880 128 aa13.38□□□□□ -0.27
PCDHA13-202ENST00000409494 CRPP02741 224 aa13.38□□□□□ -0.27
PCDHA13-202ENST00000409494 Q86TA4 180 aa13.38□□□□□ -0.27
PCDHA13-202ENST00000409494 JKAMPQ9P055 326 aa13.38□□□□□ -0.27
PCDHA13-202ENST00000409494 TSSC4Q9Y5U2 329 aaPredicted RBP13.38□□□□□ -0.27
PCDHA13-202ENST00000409494 TRBV19A0A075B6N1 114 aa13.37□□□□□ -0.27
PCDHA13-202ENST00000409494 VCYO14598 125 aa13.37□□□□□ -0.27
PCDHA13-202ENST00000409494 NDUFS7O75251 213 aa13.37□□□□□ -0.27
PCDHA13-202ENST00000409494 MLANAQ16655 118 aa13.37□□□□□ -0.27
PCDHA13-202ENST00000409494 DEFB112Q30KQ8 113 aa13.37□□□□□ -0.27
PCDHA13-202ENST00000409494 DPH3Q96FX2 82 aa13.37□□□□□ -0.27
PCDHA13-202ENST00000409494 CUL9Q8IWT3 2517 aa13.37□□□□□ -0.27
PCDHA13-202ENST00000409494 ANKHD1Q8IWZ3 2542 aaKnown RBP13.37□□□□□ -0.27
PCDHA13-202ENST00000409494 ABCA1O95477 2261 aa13.36□□□□□ -0.27
PCDHA13-202ENST00000409494 TMEM89A2RUT3 159 aa13.36□□□□□ -0.27
PCDHA13-202ENST00000409494 HOXA3O43365 443 aaPredicted RBP13.36□□□□□ -0.27
PCDHA13-202ENST00000409494 FOXE3Q13461 319 aa13.36□□□□□ -0.27
PCDHA13-202ENST00000409494 MRAP2Q96G30 205 aa13.36□□□□□ -0.27
PCDHA13-202ENST00000409494 DENND4AQ7Z401 1863 aa13.36□□□□□ -0.27
PCDHA13-202ENST00000409494 APOC4P55056 127 aa13.36□□□□□ -0.27
PCDHA13-202ENST00000409494 TRAV12-3A0A0B4J271 114 aa13.36□□□□□ -0.27
PCDHA13-202ENST00000409494 H3BRN7 92 aa13.36□□□□□ -0.27
PCDHA13-202ENST00000409494 NUP35Q8NFH5 326 aa13.36□□□□□ -0.27
PCDHA13-202ENST00000409494 IGHV4-30-2A0A087WSY4 118 aa13.36□□□□□ -0.27
PCDHA13-202ENST00000409494 TCTEX1D4Q5JR98 221 aa13.36□□□□□ -0.27
PCDHA13-202ENST00000409494 OR9G4Q8NGQ1 327 aa13.36□□□□□ -0.27
PCDHA13-202ENST00000409494 C3orf79P0CE67 100 aa13.35□□□□□ -0.27
PCDHA13-202ENST00000409494 HAPLN4Q86UW8 402 aa13.35□□□□□ -0.27
PCDHA13-202ENST00000409494 A0A087WX48 190 aa13.35□□□□□ -0.27
PCDHA13-202ENST00000409494 IGLC1P0CG04 106 aa13.35□□□□□ -0.27
PCDHA13-202ENST00000409494 CHCHD5Q9BSY4 110 aa13.35□□□□□ -0.27
PCDHA13-202ENST00000409494 TRGV1A0A0A0MS02 117 aa13.35□□□□□ -0.27
PCDHA13-202ENST00000409494 TYMSP04818 313 aa13.35□□□□□ -0.27
PCDHA13-202ENST00000409494 LYZL1Q6UWQ5 148 aa13.35□□□□□ -0.27
PCDHA13-202ENST00000409494 A8MWP6 167 aa13.34□□□□□ -0.27
PCDHA13-202ENST00000409494 DEFB121Q5J5C9 76 aa13.34□□□□□ -0.27
PCDHA13-202ENST00000409494 ZNF114Q8NC26 417 aa13.34□□□□□ -0.27
PCDHA13-202ENST00000409494 SRCAPQ6ZRS2 3230 aa13.34□□□□□ -0.27
PCDHA13-202ENST00000409494 IGHV7-4-1A0A0J9YVY3 117 aa13.34□□□□□ -0.27
PCDHA13-202ENST00000409494 ADARB2-AS1A8MUL3 147 aa13.34□□□□□ -0.27
PCDHA13-202ENST00000409494 MALP21145 153 aa13.34□□□□□ -0.27
PCDHA13-202ENST00000409494 MRPL53Q96EL3 112 aaKnown RBP13.34□□□□□ -0.27
PCDHA13-202ENST00000409494 MED13LQ71F56 2210 aa13.34□□□□□ -0.27
PCDHA13-202ENST00000409494 TMEM86BQ8N661 226 aa13.34□□□□□ -0.27
PCDHA13-202ENST00000409494 FGF23Q9GZV9 251 aaPredicted RBP13.34□□□□□ -0.27
PCDHA13-202ENST00000409494 Q0VG73 95 aa13.33□□□□□ -0.28
PCDHA13-202ENST00000409494 LAGE3Q14657 143 aa13.33□□□□□ -0.28
PCDHA13-202ENST00000409494 MED13Q9UHV7 2174 aa13.33□□□□□ -0.28
PCDHA13-202ENST00000409494 DPM2O94777 84 aa13.33□□□□□ -0.28
PCDHA13-202ENST00000409494 PRB1P04280 392 aa13.33□□□□□ -0.28
PCDHA13-202ENST00000409494 LGALS1P09382 135 aaKnown RBP13.33□□□□□ -0.28
PCDHA13-202ENST00000409494 RPL35AP18077 110 aaKnown RBP13.33□□□□□ -0.28
PCDHA13-202ENST00000409494 PPIFP30405 207 aaKnown RBP13.33□□□□□ -0.28
PCDHA13-202ENST00000409494 IGFBPL1Q8WX77 278 aa13.33□□□□□ -0.28
PCDHA13-202ENST00000409494 VGLL1Q99990 258 aa13.33□□□□□ -0.28
PCDHA13-202ENST00000409494 LENEPQ9Y5L5 61 aa13.33□□□□□ -0.28
PCDHA13-202ENST00000409494 H7C2G1 150 aa13.33□□□□□ -0.28
PCDHA13-202ENST00000409494 SRSF2Q01130 221 aaKnown RBP13.33□□□□□ -0.28
PCDHA13-202ENST00000409494 LOXL1Q08397 574 aaPredicted RBP13.33□□□□□ -0.28
PCDHA13-202ENST00000409494 MRPL52Q86TS9 123 aaKnown RBP13.32□□□□□ -0.28
PCDHA13-202ENST00000409494 MS4A6AQ9H2W1 248 aa13.32□□□□□ -0.28
PCDHA13-202ENST00000409494 CACNA1AO00555 2505 aa13.32□□□□□ -0.28
PCDHA13-202ENST00000409494 DLEU1O43261 78 aa13.32□□□□□ -0.28
PCDHA13-202ENST00000409494 IL17RELQ6ZVW7 336 aa13.32□□□□□ -0.28
PCDHA13-202ENST00000409494 IGLC7A0M8Q6 106 aa13.32□□□□□ -0.28
PCDHA13-202ENST00000409494 CD28P10747 220 aa13.32□□□□□ -0.28
PCDHA13-202ENST00000409494 MUC22E2RYF6 1773 aaPredicted RBP13.32□□□□□ -0.28
PCDHA13-202ENST00000409494 SPCS1Q9Y6A9 102 aa13.31□□□□□ -0.28
PCDHA13-202ENST00000409494 IFI27L1Q96BM0 104 aa13.31□□□□□ -0.28
PCDHA13-202ENST00000409494 C8orf86Q6ZUL3 223 aa13.31□□□□□ -0.28
PCDHA13-202ENST00000409494 C5orf30Q96GV9 206 aa13.31□□□□□ -0.28
PCDHA13-202ENST00000409494 LINC00479Q96M42 142 aa13.3□□□□□ -0.28
PCDHA13-202ENST00000409494 IGHV4-59P01825 116 aa13.3□□□□□ -0.28
PCDHA13-202ENST00000409494 ZNF876PQ49A33 203 aa13.3□□□□□ -0.28
PCDHA13-202ENST00000409494 FAM231DQ6ZW35 169 aa13.3□□□□□ -0.28
PCDHA13-202ENST00000409494 A8MWV9 139 aa13.3□□□□□ -0.28
PCDHA13-202ENST00000409494 H3BUT2 72 aa13.3□□□□□ -0.28
PCDHA13-202ENST00000409494 ARL6IP6Q8N6S5 226 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms