RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 TCEAL7Q9BRU2 100 aa15.22■□□□□ 0.03
VSX1-203ENST00000409285 GNG13Q9P2W3 67 aa15.22■□□□□ 0.03
VSX1-203ENST00000409285 HLA-DMBP28068 263 aa15.21■□□□□ 0.03
VSX1-203ENST00000409285 UBE2G2P60604 165 aa15.21■□□□□ 0.03
VSX1-203ENST00000409285 CCDC28AQ8IWP9 274 aa15.21■□□□□ 0.03
VSX1-203ENST00000409285 RXFP4Q8TDU9 374 aa15.21■□□□□ 0.03
VSX1-203ENST00000409285 PAGE4O60829 102 aa15.2■□□□□ 0.02
VSX1-203ENST00000409285 BCL2P10415 239 aa15.2■□□□□ 0.02
VSX1-203ENST00000409285 DEFB131AP59861 70 aa15.2■□□□□ 0.02
VSX1-203ENST00000409285 Q8N1Y9 231 aa15.2■□□□□ 0.02
VSX1-203ENST00000409285 C5orf17Q8NAS9 161 aa15.2■□□□□ 0.02
VSX1-203ENST00000409285 LINC00052Q96N35 136 aa15.2■□□□□ 0.02
VSX1-203ENST00000409285 LINC00862A6NCI5 91 aa15.2■□□□□ 0.02
VSX1-203ENST00000409285 PGPA6NDG6 321 aa15.2■□□□□ 0.02
VSX1-203ENST00000409285 M0R3E3 92 aa15.2■□□□□ 0.02
VSX1-203ENST00000409285 FOXI2Q6ZQN5 318 aa15.2■□□□□ 0.02
VSX1-203ENST00000409285 ZNF738Q8NE65 137 aa15.2■□□□□ 0.02
VSX1-203ENST00000409285 RPUSD4Q96CM3 377 aaKnown RBP15.2■□□□□ 0.02
VSX1-203ENST00000409285 SUMO1P63165 101 aaKnown RBP15.19■□□□□ 0.02
VSX1-203ENST00000409285 PRR25Q96S07 402 aa15.19■□□□□ 0.02
VSX1-203ENST00000409285 SAV1Q9H4B6 383 aaPredicted RBP15.19■□□□□ 0.02
VSX1-203ENST00000409285 CSN1S1P47710 185 aa15.18■□□□□ 0.02
VSX1-203ENST00000409285 MEF2BQ02080 365 aaPredicted RBP15.18■□□□□ 0.02
VSX1-203ENST00000409285 NDUFA5Q16718 116 aa15.18■□□□□ 0.02
VSX1-203ENST00000409285 CST9LP1Q5W188 147 aa15.18■□□□□ 0.02
VSX1-203ENST00000409285 COMMD7Q86VX2 200 aa15.18■□□□□ 0.02
VSX1-203ENST00000409285 CMTM2Q8TAZ6 248 aa15.18■□□□□ 0.02
VSX1-203ENST00000409285 FAM210AQ96ND0 272 aa15.18■□□□□ 0.02
VSX1-203ENST00000409285 VAX2Q9UIW0 290 aa15.18■□□□□ 0.02
VSX1-203ENST00000409285 LOC102723971A0A1B0GUV8 181 aa15.17■□□□□ 0.02
VSX1-203ENST00000409285 SERTM2A0A1B0GWG4 89 aa15.17■□□□□ 0.02
VSX1-203ENST00000409285 ZNF705FA8MVS1 300 aaPredicted RBP15.17■□□□□ 0.02
VSX1-203ENST00000409285 C11orf94C9JXX5 98 aa15.17■□□□□ 0.02
VSX1-203ENST00000409285 NDUFS6O75380 124 aaKnown RBP15.17■□□□□ 0.02
VSX1-203ENST00000409285 ATP5G3P48201 142 aa15.17■□□□□ 0.02
VSX1-203ENST00000409285 MED9Q9NWA0 146 aa15.17■□□□□ 0.02
VSX1-203ENST00000409285 A0A0J9YX75 114 aa15.16■□□□□ 0.02
VSX1-203ENST00000409285 RBAKDNA6NC62 111 aa15.16■□□□□ 0.02
VSX1-203ENST00000409285 RBFOX3A6NFN3 312 aa15.16■□□□□ 0.02
VSX1-203ENST00000409285 DIRC3C9JPN6 131 aa15.16■□□□□ 0.02
VSX1-203ENST00000409285 SLC25A5P05141 298 aaKnown RBP15.16■□□□□ 0.02
VSX1-203ENST00000409285 HLA-DRB4P13762 266 aa15.16■□□□□ 0.02
VSX1-203ENST00000409285 APRG1Q8IVJ8 170 aa15.16■□□□□ 0.02
VSX1-203ENST00000409285 OR8A1Q8NGG7 326 aa15.16■□□□□ 0.02
VSX1-203ENST00000409285 HIST1H2BAQ96A08 127 aa15.16■□□□□ 0.02
VSX1-203ENST00000409285 EPDR1Q9UM22 224 aa15.16■□□□□ 0.02
VSX1-203ENST00000409285 HLA-DRB4X5D2U9 266 aa15.16■□□□□ 0.02
VSX1-203ENST00000409285 TCRAP04437 139 aa15.15■□□□□ 0.02
VSX1-203ENST00000409285 HAGHQ16775 308 aa15.15■□□□□ 0.02
VSX1-203ENST00000409285 ZNF506Q5JVG8 444 aa15.15■□□□□ 0.02
VSX1-203ENST00000409285 SLC7A5P1Q8MH63 180 aa15.15■□□□□ 0.02
VSX1-203ENST00000409285 CLUHP3Q96NS8 147 aa15.15■□□□□ 0.02
VSX1-203ENST00000409285 ATG101Q9BSB4 218 aa15.15■□□□□ 0.02
VSX1-203ENST00000409285 WFDC10AQ9H1F0 79 aa15.15■□□□□ 0.02
VSX1-203ENST00000409285 A8MTW9 85 aa15.14■□□□□ 0.01
VSX1-203ENST00000409285 PRAC2D3DTV9 90 aa15.14■□□□□ 0.01
VSX1-203ENST00000409285 GDF5OSQ5U4N7 250 aa15.14■□□□□ 0.01
VSX1-203ENST00000409285 EBLN2Q6P2I7 272 aa15.14■□□□□ 0.01
VSX1-203ENST00000409285 MEGF8Q7Z7M0 2845 aa15.14■□□□□ 0.01
VSX1-203ENST00000409285 A8MZ25 164 aa15.14■□□□□ 0.01
VSX1-203ENST00000409285 PDE6DO43924 150 aa15.14■□□□□ 0.01
VSX1-203ENST00000409285 ZNF124Q15973 351 aa15.14■□□□□ 0.01
VSX1-203ENST00000409285 C9orf47Q6ZRZ4 202 aa15.14■□□□□ 0.01
VSX1-203ENST00000409285 CYB561D1Q8N8Q1 229 aa15.14■□□□□ 0.01
VSX1-203ENST00000409285 C11orf52Q96A22 123 aa15.14■□□□□ 0.01
VSX1-203ENST00000409285 CITED4Q96RK1 184 aa15.14■□□□□ 0.01
VSX1-203ENST00000409285 NPIPB6E9PJ23 425 aa15.13■□□□□ 0.01
VSX1-203ENST00000409285 F6UB75 175 aa15.13■□□□□ 0.01
VSX1-203ENST00000409285 H3BMM0 161 aa15.13■□□□□ 0.01
VSX1-203ENST00000409285 PEX7O00628 323 aa15.13■□□□□ 0.01
VSX1-203ENST00000409285 DUSP14O95147 198 aaKnown RBP15.13■□□□□ 0.01
VSX1-203ENST00000409285 DEFB1P60022 68 aa15.13■□□□□ 0.01
VSX1-203ENST00000409285 GNG5P63218 68 aa15.13■□□□□ 0.01
VSX1-203ENST00000409285 TOR2AQ5JU69 321 aa15.13■□□□□ 0.01
VSX1-203ENST00000409285 DEFB125Q8N687 156 aa15.13■□□□□ 0.01
VSX1-203ENST00000409285 OR10J6PQ8NGY7 276 aa15.13■□□□□ 0.01
VSX1-203ENST00000409285 SMDT1Q9H4I9 107 aa15.13■□□□□ 0.01
VSX1-203ENST00000409285 FBLL1A6NHQ2 334 aaKnown RBP15.12■□□□□ 0.01
VSX1-203ENST00000409285 F6UZH7 168 aa15.12■□□□□ 0.01
VSX1-203ENST00000409285 K7EQM0 130 aa15.12■□□□□ 0.01
VSX1-203ENST00000409285 ACTL10Q5JWF8 245 aa15.12■□□□□ 0.01
VSX1-203ENST00000409285 TRPT1Q86TN4 253 aaKnown RBP15.12■□□□□ 0.01
VSX1-203ENST00000409285 RARRES2Q99969 163 aa15.12■□□□□ 0.01
VSX1-203ENST00000409285 EIF5A2Q9GZV4 153 aaKnown RBP15.12■□□□□ 0.01
VSX1-203ENST00000409285 AURKAIP1Q9NWT8 199 aaPredicted RBP15.12■□□□□ 0.01
VSX1-203ENST00000409285 IGKV2-40A0A087WW87 121 aaPredicted RBP15.11■□□□□ 0.01
VSX1-203ENST00000409285 RAB19A4D1S5 217 aa15.11■□□□□ 0.01
VSX1-203ENST00000409285 KNCNA6PVL3 124 aa15.11■□□□□ 0.01
VSX1-203ENST00000409285 IGKV2D-40P01614 121 aaPredicted RBP15.11■□□□□ 0.01
VSX1-203ENST00000409285 CNN1P51911 297 aaKnown RBP15.11■□□□□ 0.01
VSX1-203ENST00000409285 STHQ8IWL8 128 aa15.11■□□□□ 0.01
VSX1-203ENST00000409285 TMEM75Q8N9X5 138 aa15.11■□□□□ 0.01
VSX1-203ENST00000409285 PPP1R14DQ9NXH3 145 aa15.11■□□□□ 0.01
VSX1-203ENST00000409285 TMEM250H0YL14 139 aa15.1■□□□□ 0.01
VSX1-203ENST00000409285 DEFA6Q01524 100 aa15.1■□□□□ 0.01
VSX1-203ENST00000409285 HIST1H1AQ02539 215 aaPredicted RBP15.1■□□□□ 0.01
VSX1-203ENST00000409285 GOLT1AQ6ZVE7 132 aa15.1■□□□□ 0.01
VSX1-203ENST00000409285 C2CD4CQ8TF44 421 aa15.1■□□□□ 0.01
VSX1-203ENST00000409285 ODF3Q96PU9 254 aa15.1■□□□□ 0.01
VSX1-203ENST00000409285 SRD5A3Q9H8P0 318 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms