RNA–Protein interactions for RNA: ENST00000409251.7

PTPRN-202, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 1 (best) BASIC

Gene PTPRN, Length 3,622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-202ENST00000409251 FXYD2P54710 66 aa10.35□□□□□ -0.75
PTPRN-202ENST00000409251 HSD52Q0P140 79 aa10.35□□□□□ -0.75
PTPRN-202ENST00000409251 CHCHD1Q96BP2 118 aaKnown RBP10.35□□□□□ -0.75
PTPRN-202ENST00000409251 J3KRW8 73 aa10.35□□□□□ -0.75
PTPRN-202ENST00000409251 TWIST1Q15672 202 aa10.35□□□□□ -0.75
PTPRN-202ENST00000409251 RUSC1-AS1Q66K80 236 aa10.35□□□□□ -0.75
PTPRN-202ENST00000409251 LYPD2Q6UXB3 125 aa10.35□□□□□ -0.75
PTPRN-202ENST00000409251 PRELID3AQ96N28 172 aa10.35□□□□□ -0.75
PTPRN-202ENST00000409251 ZNF747Q9BV97 191 aa10.35□□□□□ -0.75
PTPRN-202ENST00000409251 NPFFR1Q9GZQ6 430 aa10.35□□□□□ -0.75
PTPRN-202ENST00000409251 RNF7Q9UBF6 113 aa10.35□□□□□ -0.75
PTPRN-202ENST00000409251 A0A1W2PPM0 123 aa10.35□□□□□ -0.75
PTPRN-202ENST00000409251 CKS1BP61024 79 aa10.35□□□□□ -0.75
PTPRN-202ENST00000409251 ZNF418Q8TF45 676 aaPredicted RBP10.35□□□□□ -0.75
PTPRN-202ENST00000409251 NEU4Q8WWR8 484 aaPredicted RBP10.35□□□□□ -0.75
PTPRN-202ENST00000409251 A0A1B0GV72 72 aa10.34□□□□□ -0.75
PTPRN-202ENST00000409251 FOXA2Q9Y261 457 aaPredicted RBP10.34□□□□□ -0.75
PTPRN-202ENST00000409251 LOC107984156A0A0G2JMH3 177 aa10.34□□□□□ -0.75
PTPRN-202ENST00000409251 A0A1B0GWB2 263 aa10.34□□□□□ -0.75
PTPRN-202ENST00000409251 TNFRSF1AP19438 455 aa10.34□□□□□ -0.75
PTPRN-202ENST00000409251 LOXL3P58215 753 aa10.34□□□□□ -0.75
PTPRN-202ENST00000409251 WT1-ASQ06250 92 aa10.34□□□□□ -0.75
PTPRN-202ENST00000409251 KLF5Q13887 457 aaPredicted RBP10.34□□□□□ -0.75
PTPRN-202ENST00000409251 ANXA2RQ3ZCQ2 193 aa10.34□□□□□ -0.75
PTPRN-202ENST00000409251 ARL17AQ8IVW1 177 aa10.34□□□□□ -0.75
PTPRN-202ENST00000409251 FXYD5Q96DB9 178 aa10.34□□□□□ -0.75
PTPRN-202ENST00000409251 CGB1A6NKQ9 187 aa10.34□□□□□ -0.75
PTPRN-202ENST00000409251 SRRM5B3KS81 715 aa10.34□□□□□ -0.75
PTPRN-202ENST00000409251 RIGQ13278 110 aa10.34□□□□□ -0.75
PTPRN-202ENST00000409251 H3BVH4 76 aa10.33□□□□□ -0.76
PTPRN-202ENST00000409251 TCRAP04437 139 aa10.33□□□□□ -0.76
PTPRN-202ENST00000409251 SUB1P53999 127 aaKnown RBP eCLIP10.33□□□□□ -0.76
PTPRN-202ENST00000409251 C19orf24Q9BVV8 132 aa10.33□□□□□ -0.76
PTPRN-202ENST00000409251 MS4A6AQ9H2W1 248 aa10.33□□□□□ -0.76
PTPRN-202ENST00000409251 TRAV26-1A0A087WT03 109 aa10.33□□□□□ -0.76
PTPRN-202ENST00000409251 J3QR89 54 aa10.33□□□□□ -0.76
PTPRN-202ENST00000409251 SMAD7O15105 426 aaKnown RBP10.33□□□□□ -0.76
PTPRN-202ENST00000409251 CNIH1O95406 144 aa10.33□□□□□ -0.76
PTPRN-202ENST00000409251 KIR2DS2P43631 304 aa10.33□□□□□ -0.76
PTPRN-202ENST00000409251 LGALS7P47929 136 aa10.33□□□□□ -0.76
PTPRN-202ENST00000409251 INSL3P51460 131 aa10.33□□□□□ -0.76
PTPRN-202ENST00000409251 IGHV3OR16-13A0A075B7E8 117 aa10.32□□□□□ -0.76
PTPRN-202ENST00000409251 IGHV3-74A0A0B4J1X5 117 aa10.32□□□□□ -0.76
PTPRN-202ENST00000409251 KBTBD11-OT1A0A1B0GTJ5 212 aa10.32□□□□□ -0.76
PTPRN-202ENST00000409251 E7EQL1 145 aa10.32□□□□□ -0.76
PTPRN-202ENST00000409251 ORM1P02763 201 aa10.32□□□□□ -0.76
PTPRN-202ENST00000409251 Q8TAT8 98 aa10.32□□□□□ -0.76
PTPRN-202ENST00000409251 IFI27L1Q96BM0 104 aa10.32□□□□□ -0.76
PTPRN-202ENST00000409251 FOXC2Q99958 501 aa10.32□□□□□ -0.76
PTPRN-202ENST00000409251 MRPL32Q9BYC8 188 aaKnown RBP10.32□□□□□ -0.76
PTPRN-202ENST00000409251 TMEM75Q8N9X5 138 aa10.32□□□□□ -0.76
PTPRN-202ENST00000409251 ABCA2Q9BZC7 2435 aa10.32□□□□□ -0.76
PTPRN-202ENST00000409251 GAGE12HA6NDE8 117 aa10.32□□□□□ -0.76
PTPRN-202ENST00000409251 H3BRM9 83 aa10.32□□□□□ -0.76
PTPRN-202ENST00000409251 IGHV3-23P01764 117 aa10.32□□□□□ -0.76
PTPRN-202ENST00000409251 ARL3P36405 182 aa10.32□□□□□ -0.76
PTPRN-202ENST00000409251 TNFRSF14Q92956 283 aa10.32□□□□□ -0.76
PTPRN-202ENST00000409251 HIST1H4GQ99525 98 aa10.32□□□□□ -0.76
PTPRN-202ENST00000409251 TCRBV4S1A1TA0A5B7 111 aa10.31□□□□□ -0.76
PTPRN-202ENST00000409251 C3orf36Q3SXR2 165 aa10.31□□□□□ -0.76
PTPRN-202ENST00000409251 SORL1Q92673 2214 aa10.31□□□□□ -0.76
PTPRN-202ENST00000409251 FNDC10F2Z333 226 aa10.31□□□□□ -0.76
PTPRN-202ENST00000409251 F2RL2O00254 374 aa10.31□□□□□ -0.76
PTPRN-202ENST00000409251 LYZL1Q6UWQ5 148 aa10.31□□□□□ -0.76
PTPRN-202ENST00000409251 ATP5L2Q7Z4Y8 100 aa10.31□□□□□ -0.76
PTPRN-202ENST00000409251 C8orf49Q96NF6 230 aa10.31□□□□□ -0.76
PTPRN-202ENST00000409251 SIGLEC8Q9NYZ4 499 aa10.31□□□□□ -0.76
PTPRN-202ENST00000409251 UFC1Q9Y3C8 167 aa10.31□□□□□ -0.76
PTPRN-202ENST00000409251 C17orf100A8MU93 164 aa10.31□□□□□ -0.76
PTPRN-202ENST00000409251 NDUFA3O95167 84 aa10.31□□□□□ -0.76
PTPRN-202ENST00000409251 WIPF2Q8TF74 440 aaPredicted RBP10.3□□□□□ -0.76
PTPRN-202ENST00000409251 NPIPB5A8MRT5 1133 aa10.3□□□□□ -0.76
PTPRN-202ENST00000409251 NDUFS7O75251 213 aa10.3□□□□□ -0.76
PTPRN-202ENST00000409251 COX7A1P24310 79 aa10.3□□□□□ -0.76
PTPRN-202ENST00000409251 KLF17Q5JT82 389 aaPredicted RBP10.3□□□□□ -0.76
PTPRN-202ENST00000409251 LINC01545Q5VT33 79 aa10.3□□□□□ -0.76
PTPRN-202ENST00000409251 CELSR2Q9HCU4 2923 aa10.3□□□□□ -0.76
PTPRN-202ENST00000409251 A0A1B0GXF2 115 aa10.3□□□□□ -0.76
PTPRN-202ENST00000409251 CD3EP07766 207 aa10.3□□□□□ -0.76
PTPRN-202ENST00000409251 CNTFRP26992 372 aa10.3□□□□□ -0.76
PTPRN-202ENST00000409251 C17orf58Q2M2W7 97 aa10.3□□□□□ -0.76
PTPRN-202ENST00000409251 RASL11AQ6T310 242 aa10.3□□□□□ -0.76
PTPRN-202ENST00000409251 ZNF479Q96JC4 524 aa10.3□□□□□ -0.76
PTPRN-202ENST00000409251 HIGD1AQ9Y241 93 aa10.3□□□□□ -0.76
PTPRN-202ENST00000409251 GATA1P15976 413 aaPredicted RBP10.29□□□□□ -0.76
PTPRN-202ENST00000409251 ZC2HC1BQ5TFG8 222 aa10.29□□□□□ -0.76
PTPRN-202ENST00000409251 RITA1Q96K30 269 aa10.29□□□□□ -0.76
PTPRN-202ENST00000409251 INSIG2Q9Y5U4 225 aa10.29□□□□□ -0.76
PTPRN-202ENST00000409251 IGKV2D-26A0A0A0MRZ7 120 aa10.29□□□□□ -0.76
PTPRN-202ENST00000409251 C2orf83Q53S99 150 aa10.29□□□□□ -0.76
PTPRN-202ENST00000409251 FAM231DQ6ZW35 169 aa10.29□□□□□ -0.76
PTPRN-202ENST00000409251 CUBNO60494 3623 aa10.29□□□□□ -0.76
PTPRN-202ENST00000409251 C22orf46C9J442 243 aa10.28□□□□□ -0.76
PTPRN-202ENST00000409251 H7C2G1 150 aa10.28□□□□□ -0.76
PTPRN-202ENST00000409251 LEPP41159 167 aa10.28□□□□□ -0.76
PTPRN-202ENST00000409251 OR5AN1Q8NGI8 311 aa10.28□□□□□ -0.76
PTPRN-202ENST00000409251 RNASE6Q93091 150 aaKnown RBP10.28□□□□□ -0.76
PTPRN-202ENST00000409251 USP24Q9UPU5 2620 aa10.28□□□□□ -0.76
PTPRN-202ENST00000409251 TMEM189A5PLL7 270 aa10.28□□□□□ -0.76
PTPRN-202ENST00000409251 NDUFS8O00217 210 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms