RNA–Protein interactions for RNA: ENST00000409056.3

TMEFF2-203, Transcript of transmembrane protein with EGF like and two follistatin like domains 2, humanhuman

TSL 1 (best) BASIC

Gene TMEFF2, Length 3,364 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF2-203ENST00000409056 CNIH1O95406 144 aa5.48□□□□□ -1.53
TMEFF2-203ENST00000409056 NHLH1Q02575 133 aa5.48□□□□□ -1.53
TMEFF2-203ENST00000409056 DYNAPQ8N1N2 210 aa5.48□□□□□ -1.53
TMEFF2-203ENST00000409056 LINC01560Q8TB33 94 aa5.48□□□□□ -1.53
TMEFF2-203ENST00000409056 RASL11BQ9BPW5 248 aa5.48□□□□□ -1.53
TMEFF2-203ENST00000409056 NDFIP1Q9BT67 221 aa5.48□□□□□ -1.53
TMEFF2-203ENST00000409056 FLNCQ14315 2725 aa5.48□□□□□ -1.53
TMEFF2-203ENST00000409056 DOPEY2Q9Y3R5 2298 aa5.48□□□□□ -1.53
TMEFF2-203ENST00000409056 HAX1O00165 279 aa5.47□□□□□ -1.53
TMEFF2-203ENST00000409056 LIPFP07098 398 aa5.47□□□□□ -1.53
TMEFF2-203ENST00000409056 EGR2P11161 476 aaPredicted RBP5.47□□□□□ -1.53
TMEFF2-203ENST00000409056 SUB1P53999 127 aaKnown RBP eCLIP5.47□□□□□ -1.53
TMEFF2-203ENST00000409056 CHCHD1Q96BP2 118 aaKnown RBP5.47□□□□□ -1.53
TMEFF2-203ENST00000409056 NGBQ9NPG2 151 aa5.47□□□□□ -1.53
TMEFF2-203ENST00000409056 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.47□□□□□ -1.53
TMEFF2-203ENST00000409056 HSBP1L1C9JCN9 74 aa5.47□□□□□ -1.53
TMEFF2-203ENST00000409056 SH2D1AO60880 128 aa5.47□□□□□ -1.53
TMEFF2-203ENST00000409056 COX8AP10176 69 aa5.47□□□□□ -1.53
TMEFF2-203ENST00000409056 MEF2CQ06413 473 aaPredicted RBP5.47□□□□□ -1.53
TMEFF2-203ENST00000409056 MRPL51Q4U2R6 128 aaKnown RBP5.47□□□□□ -1.53
TMEFF2-203ENST00000409056 FAM71F2Q6NXP2 309 aa5.47□□□□□ -1.53
TMEFF2-203ENST00000409056 FA2HQ7L5A8 372 aa5.47□□□□□ -1.53
TMEFF2-203ENST00000409056 ZNF491Q8N8L2 437 aa5.47□□□□□ -1.53
TMEFF2-203ENST00000409056 RNASE6Q93091 150 aaKnown RBP5.47□□□□□ -1.53
TMEFF2-203ENST00000409056 ONECUT1Q9UBC0 465 aa5.47□□□□□ -1.53
TMEFF2-203ENST00000409056 HIVEP3Q5T1R4 2406 aa5.47□□□□□ -1.53
TMEFF2-203ENST00000409056 C16orf97H3BN30 126 aa5.47□□□□□ -1.53
TMEFF2-203ENST00000409056 TMEM108Q6UXF1 575 aa5.47□□□□□ -1.53
TMEFF2-203ENST00000409056 ZNF414Q96IQ9 312 aa5.47□□□□□ -1.53
TMEFF2-203ENST00000409056 DYNLRB1Q9NP97 96 aa5.47□□□□□ -1.53
TMEFF2-203ENST00000409056 OTORQ9NRC9 128 aa5.47□□□□□ -1.53
TMEFF2-203ENST00000409056 CSPG4Q6UVK1 2322 aa5.46□□□□□ -1.53
TMEFF2-203ENST00000409056 SHISA9B4DS77 424 aa5.46□□□□□ -1.53
TMEFF2-203ENST00000409056 F8W735 103 aaPredicted RBP5.46□□□□□ -1.53
TMEFF2-203ENST00000409056 BUB1B-PAK6H3BSN5 160 aa5.46□□□□□ -1.53
TMEFF2-203ENST00000409056 J3KRW8 73 aa5.46□□□□□ -1.53
TMEFF2-203ENST00000409056 MRPS12O15235 138 aaKnown RBP5.46□□□□□ -1.53
TMEFF2-203ENST00000409056 IGLV1-47P01700 117 aa5.46□□□□□ -1.53
TMEFF2-203ENST00000409056 IGHG4P01861 327 aa5.46□□□□□ -1.53
TMEFF2-203ENST00000409056 TMEM97Q5BJF2 176 aa5.46□□□□□ -1.53
TMEFF2-203ENST00000409056 C16orf54Q6UWD8 224 aa5.46□□□□□ -1.53
TMEFF2-203ENST00000409056 BPIFA4PQ86YQ2 179 aa5.46□□□□□ -1.53
TMEFF2-203ENST00000409056 OR4A5Q8NH83 315 aa5.46□□□□□ -1.53
TMEFF2-203ENST00000409056 ZNF492Q9P255 531 aa5.46□□□□□ -1.53
TMEFF2-203ENST00000409056 FBN2P35556 2912 aa5.46□□□□□ -1.54
TMEFF2-203ENST00000409056 POLQO75417 2590 aa5.46□□□□□ -1.54
TMEFF2-203ENST00000409056 TMEM265A0A087WTH1 108 aa5.46□□□□□ -1.54
TMEFF2-203ENST00000409056 HOXB4P17483 251 aaPredicted RBP5.46□□□□□ -1.54
TMEFF2-203ENST00000409056 FXYD2P54710 66 aa5.46□□□□□ -1.54
TMEFF2-203ENST00000409056 GFRALQ6UXV0 394 aa5.46□□□□□ -1.54
TMEFF2-203ENST00000409056 FAM169BQ8N8A8 192 aa5.46□□□□□ -1.54
TMEFF2-203ENST00000409056 PRELID3AQ96N28 172 aa5.46□□□□□ -1.54
TMEFF2-203ENST00000409056 HIST1H1AQ02539 215 aaPredicted RBP5.46□□□□□ -1.54
TMEFF2-203ENST00000409056 TWIST1Q15672 202 aa5.46□□□□□ -1.54
TMEFF2-203ENST00000409056 PSG3Q16557 428 aa5.46□□□□□ -1.54
TMEFF2-203ENST00000409056 SAPCD1Q5SSQ6 148 aa5.46□□□□□ -1.54
TMEFF2-203ENST00000409056 PET117Q6UWS5 81 aa5.46□□□□□ -1.54
TMEFF2-203ENST00000409056 RNF125Q96EQ8 232 aa5.46□□□□□ -1.54
TMEFF2-203ENST00000409056 NCOR1P1Q9H4R4 102 aa5.46□□□□□ -1.54
TMEFF2-203ENST00000409056 SMAD5-AS1Q9Y6J3 95 aa5.46□□□□□ -1.54
TMEFF2-203ENST00000409056 WI2-2373I1.2A0A1W2PRP0 233 aa5.45□□□□□ -1.54
TMEFF2-203ENST00000409056 INS-IGF2F8WCM5 200 aa5.45□□□□□ -1.54
TMEFF2-203ENST00000409056 TRGV3P03979 118 aa5.45□□□□□ -1.54
TMEFF2-203ENST00000409056 HES1Q14469 280 aa5.45□□□□□ -1.54
TMEFF2-203ENST00000409056 ABHD17AQ96GS6 310 aa5.45□□□□□ -1.54
TMEFF2-203ENST00000409056 GAGE10A6NGK3 116 aa5.45□□□□□ -1.54
TMEFF2-203ENST00000409056 LINC01548A6NM66 108 aa5.45□□□□□ -1.54
TMEFF2-203ENST00000409056 IGF1P05019 195 aa5.45□□□□□ -1.54
TMEFF2-203ENST00000409056 APOBEC3AP31941 199 aaPredicted RBP5.45□□□□□ -1.54
TMEFF2-203ENST00000409056 PAX8Q06710 450 aa5.45□□□□□ -1.54
TMEFF2-203ENST00000409056 PIP4P1Q86T03 277 aa5.45□□□□□ -1.54
TMEFF2-203ENST00000409056 GTSCR1Q86UQ5 136 aa5.45□□□□□ -1.54
TMEFF2-203ENST00000409056 RPEQ96AT9 228 aa5.45□□□□□ -1.54
TMEFF2-203ENST00000409056 SHANK2-AS3Q9BTD1 123 aa5.45□□□□□ -1.54
TMEFF2-203ENST00000409056 NBPF19A0A087WUL8 3843 aa5.45□□□□□ -1.54
TMEFF2-203ENST00000409056 CREBBPQ92793 2442 aa5.44□□□□□ -1.54
TMEFF2-203ENST00000409056 H3BRN7 92 aa5.44□□□□□ -1.54
TMEFF2-203ENST00000409056 CD5LO43866 347 aa5.44□□□□□ -1.54
TMEFF2-203ENST00000409056 NDUFS7O75251 213 aa5.44□□□□□ -1.54
TMEFF2-203ENST00000409056 COTL1Q14019 142 aa5.44□□□□□ -1.54
TMEFF2-203ENST00000409056 ADAMTSL5Q6ZMM2 481 aa5.44□□□□□ -1.54
TMEFF2-203ENST00000409056 Q6ZS92 163 aa5.44□□□□□ -1.54
TMEFF2-203ENST00000409056 Q8NA96 180 aa5.44□□□□□ -1.54
TMEFF2-203ENST00000409056 FANCD2OSQ96PS1 177 aa5.44□□□□□ -1.54
TMEFF2-203ENST00000409056 C11orf21Q9P2W6 132 aa5.44□□□□□ -1.54
TMEFF2-203ENST00000409056 HSPB8Q9UJY1 196 aa5.44□□□□□ -1.54
TMEFF2-203ENST00000409056 MXRA5Q9NR99 2828 aa5.44□□□□□ -1.54
TMEFF2-203ENST00000409056 CT83Q5H943 113 aa5.44□□□□□ -1.54
TMEFF2-203ENST00000409056 SFTA2Q6UW10 78 aa5.44□□□□□ -1.54
TMEFF2-203ENST00000409056 FER1L6-AS1Q8NA97 138 aa5.44□□□□□ -1.54
TMEFF2-203ENST00000409056 NUP37Q8NFH4 326 aa5.44□□□□□ -1.54
TMEFF2-203ENST00000409056 OR10AG1Q8NH19 301 aa5.44□□□□□ -1.54
TMEFF2-203ENST00000409056 FAM57AQ8TBR7 257 aa5.44□□□□□ -1.54
TMEFF2-203ENST00000409056 RAB9BQ9NP90 201 aa5.44□□□□□ -1.54
TMEFF2-203ENST00000409056 PPIAL4CA0A0B4J2A2 164 aa5.44□□□□□ -1.54
TMEFF2-203ENST00000409056 TMEM189A5PLL7 270 aa5.44□□□□□ -1.54
TMEFF2-203ENST00000409056 PPIAL4GP0DN37 164 aa5.44□□□□□ -1.54
TMEFF2-203ENST00000409056 GCSHP23434 173 aa5.44□□□□□ -1.54
TMEFF2-203ENST00000409056 FAM104BQ5XKR9 115 aa5.44□□□□□ -1.54
TMEFF2-203ENST00000409056 PVRIGQ6DKI7 326 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 134.9 ms