RNA–Protein interactions for RNA: ENST00000409022.2

PTPN18-203, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-203ENST00000409022 NHLH2Q02577 135 aa13.22□□□□□ -0.29
PTPN18-203ENST00000409022 MORN5Q5VZ52 161 aa13.22□□□□□ -0.29
PTPN18-203ENST00000409022 C20orf144Q9BQM9 153 aa13.22□□□□□ -0.29
PTPN18-203ENST00000409022 TMEM14CQ9P0S9 112 aa13.22□□□□□ -0.29
PTPN18-203ENST00000409022 TRAV5A0A0B4J249 113 aa13.21□□□□□ -0.29
PTPN18-203ENST00000409022 ZNF705GA8MUZ8 300 aaPredicted RBP13.21□□□□□ -0.29
PTPN18-203ENST00000409022 H3BQ15 152 aa13.21□□□□□ -0.29
PTPN18-203ENST00000409022 H3BTX0 84 aa13.21□□□□□ -0.29
PTPN18-203ENST00000409022 PDE6HQ13956 83 aa13.21□□□□□ -0.29
PTPN18-203ENST00000409022 PPP1R1CQ8WVI7 109 aa13.21□□□□□ -0.29
PTPN18-203ENST00000409022 SAT2Q96F10 170 aaPredicted RBP13.21□□□□□ -0.29
PTPN18-203ENST00000409022 OR5AC2Q9NZP5 309 aa13.21□□□□□ -0.29
PTPN18-203ENST00000409022 PRELID1Q9Y255 219 aa13.21□□□□□ -0.29
PTPN18-203ENST00000409022 TIMM9Q9Y5J7 89 aa13.21□□□□□ -0.29
PTPN18-203ENST00000409022 H7BYZ3 331 aa13.2□□□□□ -0.3
PTPN18-203ENST00000409022 SLC17A3O00476 420 aa13.2□□□□□ -0.3
PTPN18-203ENST00000409022 HIST1H1EP10412 219 aaKnown RBP13.2□□□□□ -0.3
PTPN18-203ENST00000409022 HTN3P15516 51 aa13.2□□□□□ -0.3
PTPN18-203ENST00000409022 CLINT1Q14677 625 aa13.2□□□□□ -0.3
PTPN18-203ENST00000409022 THAP6Q8TBB0 222 aa13.2□□□□□ -0.3
PTPN18-203ENST00000409022 MRPL53Q96EL3 112 aaKnown RBP13.2□□□□□ -0.3
PTPN18-203ENST00000409022 C16orf74Q96GX8 76 aa13.2□□□□□ -0.3
PTPN18-203ENST00000409022 TRBV19A0A075B6N1 114 aa13.19□□□□□ -0.3
PTPN18-203ENST00000409022 LEPP41159 167 aa13.19□□□□□ -0.3
PTPN18-203ENST00000409022 ZNF493Q6ZR52 646 aa13.19□□□□□ -0.3
PTPN18-203ENST00000409022 CCDC28AQ8IWP9 274 aa13.19□□□□□ -0.3
PTPN18-203ENST00000409022 ODF3Q96PU9 254 aa13.19□□□□□ -0.3
PTPN18-203ENST00000409022 AAMDCQ9H7C9 122 aa13.19□□□□□ -0.3
PTPN18-203ENST00000409022 ZNF586Q9NXT0 402 aa13.19□□□□□ -0.3
PTPN18-203ENST00000409022 HTN1P15515 57 aa13.18□□□□□ -0.3
PTPN18-203ENST00000409022 H2BFSP57053 126 aa13.18□□□□□ -0.3
PTPN18-203ENST00000409022 MRPL32Q9BYC8 188 aaKnown RBP13.18□□□□□ -0.3
PTPN18-203ENST00000409022 WDR61Q9GZS3 305 aaKnown RBP13.18□□□□□ -0.3
PTPN18-203ENST00000409022 H0YIZ8 118 aa13.17□□□□□ -0.3
PTPN18-203ENST00000409022 MPC2O95563 127 aa13.17□□□□□ -0.3
PTPN18-203ENST00000409022 IFNA5P01569 189 aa13.17□□□□□ -0.3
PTPN18-203ENST00000409022 POM121L12Q8N7R1 296 aa13.17□□□□□ -0.3
PTPN18-203ENST00000409022 SCGB1C1Q8TD33 95 aa13.17□□□□□ -0.3
PTPN18-203ENST00000409022 ATP5SQ99766 215 aa13.17□□□□□ -0.3
PTPN18-203ENST00000409022 VPS13DQ5THJ4 4388 aa13.16□□□□□ -0.3
PTPN18-203ENST00000409022 NPIPB6E9PJ23 425 aa13.16□□□□□ -0.3
PTPN18-203ENST00000409022 UBE2DNLQ8IWF7 75 aa13.16□□□□□ -0.3
PTPN18-203ENST00000409022 TMEM263Q8WUH6 116 aaKnown RBP13.16□□□□□ -0.3
PTPN18-203ENST00000409022 TIMM8BQ9Y5J9 83 aaPredicted RBP13.16□□□□□ -0.3
PTPN18-203ENST00000409022 KMT2AQ03164 3969 aa13.16□□□□□ -0.3
PTPN18-203ENST00000409022 PRAC2D3DTV9 90 aa13.15□□□□□ -0.3
PTPN18-203ENST00000409022 DEFB130BP0DP73 79 aa13.15□□□□□ -0.3
PTPN18-203ENST00000409022 DEFB130AP0DP74 79 aa13.15□□□□□ -0.3
PTPN18-203ENST00000409022 RPL12P30050 165 aaKnown RBP13.15□□□□□ -0.3
PTPN18-203ENST00000409022 C15orf53Q8NAA6 179 aa13.15□□□□□ -0.3
PTPN18-203ENST00000409022 BLNKQ8WV28 456 aa13.15□□□□□ -0.3
PTPN18-203ENST00000409022 PLA2G2EQ9NZK7 142 aa13.15□□□□□ -0.3
PTPN18-203ENST00000409022 HSPB11Q9Y547 144 aa13.15□□□□□ -0.3
PTPN18-203ENST00000409022 PYYP10082 97 aa13.14□□□□□ -0.31
PTPN18-203ENST00000409022 GCSAMLQ5JQS6 135 aa13.14□□□□□ -0.31
PTPN18-203ENST00000409022 GFI1BQ5VTD9 330 aa13.14□□□□□ -0.31
PTPN18-203ENST00000409022 LINC00477Q96M19 166 aa13.14□□□□□ -0.31
PTPN18-203ENST00000409022 OR51M1Q9H341 326 aa13.14□□□□□ -0.31
PTPN18-203ENST00000409022 FUT9Q9Y231 359 aa13.14□□□□□ -0.31
PTPN18-203ENST00000409022 ATP5G1P05496 136 aa13.13□□□□□ -0.31
PTPN18-203ENST00000409022 NBEAP1P0C6P0 100 aa13.13□□□□□ -0.31
PTPN18-203ENST00000409022 CT45A10P0DMU9 189 aa13.13□□□□□ -0.31
PTPN18-203ENST00000409022 PRB4P10163 310 aaPredicted RBP13.13□□□□□ -0.31
PTPN18-203ENST00000409022 AZU1P20160 251 aa13.13□□□□□ -0.31
PTPN18-203ENST00000409022 ATP5G3P48201 142 aa13.13□□□□□ -0.31
PTPN18-203ENST00000409022 MIR17HGQ75NE6 70 aa13.13□□□□□ -0.31
PTPN18-203ENST00000409022 PAXXQ9BUH6 204 aa13.13□□□□□ -0.31
PTPN18-203ENST00000409022 SLC25A2Q9BXI2 301 aa13.13□□□□□ -0.31
PTPN18-203ENST00000409022 CBY3A6NI87 242 aa13.12□□□□□ -0.31
PTPN18-203ENST00000409022 NDUFB4O95168 129 aa13.12□□□□□ -0.31
PTPN18-203ENST00000409022 PTTG1O95997 202 aa13.12□□□□□ -0.31
PTPN18-203ENST00000409022 PRM2P04554 102 aa13.12□□□□□ -0.31
PTPN18-203ENST00000409022 SLC25A5P05141 298 aaKnown RBP13.12□□□□□ -0.31
PTPN18-203ENST00000409022 TAS2R45P59539 299 aa13.12□□□□□ -0.31
PTPN18-203ENST00000409022 TMEM88Q6PEY1 159 aa13.12□□□□□ -0.31
PTPN18-203ENST00000409022 PYGO2Q9BRQ0 406 aa13.12□□□□□ -0.31
PTPN18-203ENST00000409022 SNURFLB1AK76 121 aa13.11□□□□□ -0.31
PTPN18-203ENST00000409022 J3KRW8 73 aa13.11□□□□□ -0.31
PTPN18-203ENST00000409022 M0R3E3 92 aa13.11□□□□□ -0.31
PTPN18-203ENST00000409022 OR7C2O60412 319 aa13.11□□□□□ -0.31
PTPN18-203ENST00000409022 CSN1S1P47710 185 aa13.11□□□□□ -0.31
PTPN18-203ENST00000409022 ICAM4Q14773 271 aa13.11□□□□□ -0.31
PTPN18-203ENST00000409022 RNF212Q495C1 297 aa13.11□□□□□ -0.31
PTPN18-203ENST00000409022 TMEM78Q5T7P6 136 aa13.11□□□□□ -0.31
PTPN18-203ENST00000409022 RNASE8Q8TDE3 154 aaKnown RBP13.11□□□□□ -0.31
PTPN18-203ENST00000409022 FAM167A-AS1Q96KT0 104 aa13.11□□□□□ -0.31
PTPN18-203ENST00000409022 PARD6GQ9BYG4 376 aaPredicted RBP13.11□□□□□ -0.31
PTPN18-203ENST00000409022 MBD2Q9UBB5 411 aa13.11□□□□□ -0.31
PTPN18-203ENST00000409022 TRAV12-3A0A0B4J271 114 aa13.1□□□□□ -0.31
PTPN18-203ENST00000409022 PLAC8L1A1L4L8 177 aa13.1□□□□□ -0.31
PTPN18-203ENST00000409022 F5H768 121 aa13.1□□□□□ -0.31
PTPN18-203ENST00000409022 KHDC3LQ587J8 217 aa13.1□□□□□ -0.31
PTPN18-203ENST00000409022 FFAR4Q5NUL3 377 aa13.1□□□□□ -0.31
PTPN18-203ENST00000409022 EXOC3-AS1Q8N2X6 119 aa13.1□□□□□ -0.31
PTPN18-203ENST00000409022 RNF141Q8WVD5 230 aa13.1□□□□□ -0.31
PTPN18-203ENST00000409022 SMIM3Q9BZL3 60 aa13.1□□□□□ -0.31
PTPN18-203ENST00000409022 NOP10Q9NPE3 64 aaKnown RBP13.1□□□□□ -0.31
PTPN18-203ENST00000409022 C7orf71A4D174 169 aa13.09□□□□□ -0.31
PTPN18-203ENST00000409022 NMBP08949 121 aa13.09□□□□□ -0.31
PTPN18-203ENST00000409022 LYPD1Q8N2G4 141 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms