RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 F8VRH5 84 aa10.46□□□□□ -0.74
RNF43-201ENST00000407977 IGHV3-73A0A0B4J1V6 119 aa10.46□□□□□ -0.74
RNF43-201ENST00000407977 TRAV13-1A0A0B4J241 112 aa10.46□□□□□ -0.74
RNF43-201ENST00000407977 CDKN1BP46527 198 aa10.46□□□□□ -0.74
RNF43-201ENST00000407977 SPACA3Q8IXA5 215 aa10.46□□□□□ -0.74
RNF43-201ENST00000407977 MDS2Q8NDY4 140 aa10.46□□□□□ -0.74
RNF43-201ENST00000407977 TCF15Q12870 199 aa10.45□□□□□ -0.74
RNF43-201ENST00000407977 SBF2Q86WG5 1849 aa10.45□□□□□ -0.74
RNF43-201ENST00000407977 HLA-DMBP28068 263 aa10.45□□□□□ -0.74
RNF43-201ENST00000407977 NDPQ00604 133 aa10.45□□□□□ -0.74
RNF43-201ENST00000407977 LINC00527Q9UJ94 153 aa10.45□□□□□ -0.74
RNF43-201ENST00000407977 LCTP09848 1927 aa10.45□□□□□ -0.74
RNF43-201ENST00000407977 A0A087WWL8 130 aa10.45□□□□□ -0.74
RNF43-201ENST00000407977 KIR2DL5BA0A0G2JN68 375 aa10.45□□□□□ -0.74
RNF43-201ENST00000407977 KIR2DL5BA0A0G2JPC4 375 aa10.45□□□□□ -0.74
RNF43-201ENST00000407977 I3L3M4 83 aa10.45□□□□□ -0.74
RNF43-201ENST00000407977 KIR2DL5AQ8N109 375 aa10.45□□□□□ -0.74
RNF43-201ENST00000407977 WIPF2Q8TF74 440 aaPredicted RBP10.45□□□□□ -0.74
RNF43-201ENST00000407977 CEP250Q9BV73 2442 aa10.45□□□□□ -0.74
RNF43-201ENST00000407977 LINC00205P59089 165 aa10.45□□□□□ -0.74
RNF43-201ENST00000407977 PYGO2Q9BRQ0 406 aa10.45□□□□□ -0.74
RNF43-201ENST00000407977 IGHG3P01860 377 aa10.44□□□□□ -0.74
RNF43-201ENST00000407977 FGF6P10767 208 aa10.44□□□□□ -0.74
RNF43-201ENST00000407977 SRSF2Q01130 221 aaKnown RBP10.44□□□□□ -0.74
RNF43-201ENST00000407977 IL15RAQ13261 267 aa10.44□□□□□ -0.74
RNF43-201ENST00000407977 TP53BP1Q12888 1972 aaPredicted RBP10.44□□□□□ -0.74
RNF43-201ENST00000407977 CDK2AP2O75956 126 aa10.44□□□□□ -0.74
RNF43-201ENST00000407977 FAM110DQ8TAY7 271 aaPredicted RBP10.44□□□□□ -0.74
RNF43-201ENST00000407977 SIGLEC8Q9NYZ4 499 aa10.44□□□□□ -0.74
RNF43-201ENST00000407977 HS3ST6Q96QI5 342 aa10.44□□□□□ -0.74
RNF43-201ENST00000407977 ZNF625Q96I27 306 aaPredicted RBP10.44□□□□□ -0.74
RNF43-201ENST00000407977 PRR25Q96S07 402 aa10.44□□□□□ -0.74
RNF43-201ENST00000407977 KLRD1Q13241 179 aa10.43□□□□□ -0.74
RNF43-201ENST00000407977 KLF5Q13887 457 aaPredicted RBP10.43□□□□□ -0.74
RNF43-201ENST00000407977 DOCK6Q96HP0 2047 aa10.43□□□□□ -0.74
RNF43-201ENST00000407977 K7EMI3 77 aa10.43□□□□□ -0.74
RNF43-201ENST00000407977 IGFL4Q6B9Z1 124 aa10.43□□□□□ -0.74
RNF43-201ENST00000407977 C20orf78Q9BR46 151 aa10.43□□□□□ -0.74
RNF43-201ENST00000407977 GAGE12JA6NER3 117 aa10.43□□□□□ -0.74
RNF43-201ENST00000407977 GAGE7O76087 117 aa10.43□□□□□ -0.74
RNF43-201ENST00000407977 GAGE12FP0CL80 117 aa10.43□□□□□ -0.74
RNF43-201ENST00000407977 GAGE12GP0CL81 117 aa10.43□□□□□ -0.74
RNF43-201ENST00000407977 GAGE12IP0CL82 117 aa10.43□□□□□ -0.74
RNF43-201ENST00000407977 GAGE4Q13068 117 aa10.43□□□□□ -0.74
RNF43-201ENST00000407977 ZNF833PQ6ZTB9 187 aa10.43□□□□□ -0.74
RNF43-201ENST00000407977 IGLC7A0M8Q6 106 aa10.43□□□□□ -0.74
RNF43-201ENST00000407977 INS-IGF2F8WCM5 200 aa10.43□□□□□ -0.74
RNF43-201ENST00000407977 IGKV1-39P01597 117 aa10.43□□□□□ -0.74
RNF43-201ENST00000407977 TRACP01848 142 aa10.43□□□□□ -0.74
RNF43-201ENST00000407977 IGKV1D-39P04432 117 aa10.43□□□□□ -0.74
RNF43-201ENST00000407977 C3orf36Q3SXR2 165 aa10.43□□□□□ -0.74
RNF43-201ENST00000407977 PRB4P10163 310 aaPredicted RBP10.42□□□□□ -0.74
RNF43-201ENST00000407977 GATA4P43694 442 aa10.42□□□□□ -0.74
RNF43-201ENST00000407977 SMIM2Q9BVW6 85 aa10.42□□□□□ -0.74
RNF43-201ENST00000407977 B4DSR2 109 aa10.42□□□□□ -0.74
RNF43-201ENST00000407977 K7EM74 188 aa10.42□□□□□ -0.74
RNF43-201ENST00000407977 AZU1P20160 251 aa10.42□□□□□ -0.74
RNF43-201ENST00000407977 TMEM219Q86XT9 240 aa10.42□□□□□ -0.74
RNF43-201ENST00000407977 CITED1Q99966 193 aa10.42□□□□□ -0.74
RNF43-201ENST00000407977 MRPL35Q9NZE8 188 aaKnown RBP10.42□□□□□ -0.74
RNF43-201ENST00000407977 DOCK3Q8IZD9 2030 aa10.42□□□□□ -0.74
RNF43-201ENST00000407977 Q8TCH9 128 aa10.42□□□□□ -0.74
RNF43-201ENST00000407977 SIPA1L1O43166 1804 aa10.42□□□□□ -0.74
RNF43-201ENST00000407977 PRSS57Q6UWY2 283 aa10.42□□□□□ -0.74
RNF43-201ENST00000407977 LCNL1Q6ZST4 164 aa10.42□□□□□ -0.74
RNF43-201ENST00000407977 LINC00311Q8N616 119 aa10.42□□□□□ -0.74
RNF43-201ENST00000407977 ZNF114Q8NC26 417 aa10.42□□□□□ -0.74
RNF43-201ENST00000407977 H3BUX3 64 aa10.41□□□□□ -0.74
RNF43-201ENST00000407977 Q0VFX4 171 aa10.41□□□□□ -0.74
RNF43-201ENST00000407977 PIP4P2Q8N4L2 257 aa10.41□□□□□ -0.74
RNF43-201ENST00000407977 DEFB125Q8N687 156 aa10.41□□□□□ -0.74
RNF43-201ENST00000407977 IGHG4P01861 327 aa10.41□□□□□ -0.74
RNF43-201ENST00000407977 SDHAF1A6NFY7 115 aa10.41□□□□□ -0.74
RNF43-201ENST00000407977 C8orf49Q96NF6 230 aa10.41□□□□□ -0.74
RNF43-201ENST00000407977 ABCA1O95477 2261 aa10.41□□□□□ -0.74
RNF43-201ENST00000407977 H3BRN7 92 aa10.41□□□□□ -0.74
RNF43-201ENST00000407977 NDUFA12Q9UI09 145 aa10.41□□□□□ -0.74
RNF43-201ENST00000407977 THAP8Q8NA92 274 aa10.41□□□□□ -0.74
RNF43-201ENST00000407977 INTS1Q8N201 2190 aaKnown RBP10.4□□□□□ -0.74
RNF43-201ENST00000407977 RBMY1FQ15415 496 aaKnown RBP10.4□□□□□ -0.74
RNF43-201ENST00000407977 ABCA7Q8IZY2 2146 aa10.4□□□□□ -0.74
RNF43-201ENST00000407977 TRAV13-2A0A0B4J235 113 aa10.4□□□□□ -0.74
RNF43-201ENST00000407977 H3BMG7 143 aa10.4□□□□□ -0.74
RNF43-201ENST00000407977 SSC4DQ8WTU2 575 aa10.4□□□□□ -0.74
RNF43-201ENST00000407977 SAP30O75446 220 aa10.4□□□□□ -0.75
RNF43-201ENST00000407977 POU2AF1Q16633 256 aa10.4□□□□□ -0.75
RNF43-201ENST00000407977 C12orf74Q32Q52 190 aa10.4□□□□□ -0.75
RNF43-201ENST00000407977 EP300Q09472 2414 aaPredicted RBP10.39□□□□□ -0.75
RNF43-201ENST00000407977 GVINP1Q7Z2Y8 2422 aa10.39□□□□□ -0.75
RNF43-201ENST00000407977 PRR20EP86478 221 aa10.39□□□□□ -0.75
RNF43-201ENST00000407977 PRR20CP86479 221 aa10.39□□□□□ -0.75
RNF43-201ENST00000407977 PRR20DP86480 221 aa10.39□□□□□ -0.75
RNF43-201ENST00000407977 PRR20BP86481 221 aa10.39□□□□□ -0.75
RNF43-201ENST00000407977 PRR20AP86496 221 aa10.39□□□□□ -0.75
RNF43-201ENST00000407977 ZNF747Q9BV97 191 aa10.39□□□□□ -0.75
RNF43-201ENST00000407977 HAPLN4Q86UW8 402 aa10.39□□□□□ -0.75
RNF43-201ENST00000407977 ANKRD29Q8N6D5 301 aa10.39□□□□□ -0.75
RNF43-201ENST00000407977 J3QQQ9 107 aa10.39□□□□□ -0.75
RNF43-201ENST00000407977 NPYP01303 97 aa10.39□□□□□ -0.75
RNF43-201ENST00000407977 ACYP1P07311 99 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms