RNA–Protein interactions for RNA: ENST00000406908.3

HMGA1P7-201, Transcript of high mobility group AT-hook 1 pseudogene 7, humanhuman

BASIC

Gene HMGA1P7, Length 502 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P7-201ENST00000406908 KIR2DL5AQ8N109 375 aa12.34□□□□□ -0.43
HMGA1P7-201ENST00000406908 KIR2DL5BQ8NHK3 375 aa12.34□□□□□ -0.43
HMGA1P7-201ENST00000406908 RPUSD4Q96CM3 377 aaKnown RBP12.34□□□□□ -0.43
HMGA1P7-201ENST00000406908 CXorf1O96002 111 aa12.33□□□□□ -0.44
HMGA1P7-201ENST00000406908 IGKV3-20P01619 116 aa12.33□□□□□ -0.44
HMGA1P7-201ENST00000406908 FGF8P55075 233 aaPredicted RBP12.33□□□□□ -0.44
HMGA1P7-201ENST00000406908 ICAM4Q14773 271 aa12.33□□□□□ -0.44
HMGA1P7-201ENST00000406908 SUN5Q8TC36 379 aa12.33□□□□□ -0.44
HMGA1P7-201ENST00000406908 CSTL1Q9H114 145 aa12.33□□□□□ -0.44
HMGA1P7-201ENST00000406908 BOLA2-SMG1P6H3BVE0 249 aa12.32□□□□□ -0.44
HMGA1P7-201ENST00000406908 APOC4P55056 127 aa12.32□□□□□ -0.44
HMGA1P7-201ENST00000406908 EIF5AL1Q6IS14 154 aaKnown RBP12.32□□□□□ -0.44
HMGA1P7-201ENST00000406908 OR4B1Q8NGF8 309 aa12.32□□□□□ -0.44
HMGA1P7-201ENST00000406908 OR8A1Q8NGG7 326 aa12.32□□□□□ -0.44
HMGA1P7-201ENST00000406908 FAM213BQ8TBF2 198 aa12.32□□□□□ -0.44
HMGA1P7-201ENST00000406908 MRPL53Q96EL3 112 aaKnown RBP12.32□□□□□ -0.44
HMGA1P7-201ENST00000406908 TM2D3Q9BRN9 247 aa12.32□□□□□ -0.44
HMGA1P7-201ENST00000406908 Q9H3A6 140 aa12.32□□□□□ -0.44
HMGA1P7-201ENST00000406908 TMPRSS5Q9H3S3 457 aa12.32□□□□□ -0.44
HMGA1P7-201ENST00000406908 AAMDCQ9H7C9 122 aa12.32□□□□□ -0.44
HMGA1P7-201ENST00000406908 PRELID1Q9Y255 219 aa12.32□□□□□ -0.44
HMGA1P7-201ENST00000406908 MAP1LC3B2A6NCE7 125 aa12.31□□□□□ -0.44
HMGA1P7-201ENST00000406908 GIG44P09565 113 aaPredicted RBP12.31□□□□□ -0.44
HMGA1P7-201ENST00000406908 CNN1P51911 297 aaKnown RBP12.31□□□□□ -0.44
HMGA1P7-201ENST00000406908 LYPD1Q8N2G4 141 aa12.31□□□□□ -0.44
HMGA1P7-201ENST00000406908 MBD3L1Q8WWY6 194 aa12.31□□□□□ -0.44
HMGA1P7-201ENST00000406908 CLUHP3Q96NS8 147 aa12.31□□□□□ -0.44
HMGA1P7-201ENST00000406908 MAP1LC3BQ9GZQ8 125 aa12.31□□□□□ -0.44
HMGA1P7-201ENST00000406908 TMEM167BQ9NRX6 74 aa12.31□□□□□ -0.44
HMGA1P7-201ENST00000406908 A8MTW9 85 aa12.3□□□□□ -0.44
HMGA1P7-201ENST00000406908 UBE2CO00762 179 aa12.3□□□□□ -0.44
HMGA1P7-201ENST00000406908 DUSP14O95147 198 aaKnown RBP12.3□□□□□ -0.44
HMGA1P7-201ENST00000406908 NHLRC4P0CG21 123 aaPredicted RBP12.3□□□□□ -0.44
HMGA1P7-201ENST00000406908 SULT1A2P50226 295 aa12.3□□□□□ -0.44
HMGA1P7-201ENST00000406908 HIST1H1AQ02539 215 aaPredicted RBP12.3□□□□□ -0.44
HMGA1P7-201ENST00000406908 MORN3Q6PF18 240 aaPredicted RBP12.3□□□□□ -0.44
HMGA1P7-201ENST00000406908 DPPA3Q6W0C5 159 aa12.3□□□□□ -0.44
HMGA1P7-201ENST00000406908 IQCF2Q8IXL9 164 aa12.3□□□□□ -0.44
HMGA1P7-201ENST00000406908 PGPA6NDG6 321 aa12.29□□□□□ -0.44
HMGA1P7-201ENST00000406908 RAB5CP51148 216 aa12.29□□□□□ -0.44
HMGA1P7-201ENST00000406908 FXYD7P58549 80 aa12.29□□□□□ -0.44
HMGA1P7-201ENST00000406908 FAM74A1Q5RGS3 127 aa12.29□□□□□ -0.44
HMGA1P7-201ENST00000406908 AMTNQ6UX39 209 aa12.29□□□□□ -0.44
HMGA1P7-201ENST00000406908 RETNQ9HD89 108 aa12.29□□□□□ -0.44
HMGA1P7-201ENST00000406908 OTORQ9NRC9 128 aa12.29□□□□□ -0.44
HMGA1P7-201ENST00000406908 CA1P00915 261 aaPredicted RBP12.28□□□□□ -0.44
HMGA1P7-201ENST00000406908 Q6ZWC4 215 aa12.28□□□□□ -0.44
HMGA1P7-201ENST00000406908 SFT2D1Q8WV19 159 aa12.28□□□□□ -0.44
HMGA1P7-201ENST00000406908 SPATA25Q9BR10 227 aa12.28□□□□□ -0.44
HMGA1P7-201ENST00000406908 SLC35B3Q9H1N7 401 aa12.28□□□□□ -0.44
HMGA1P7-201ENST00000406908 A0A1B0GV50 99 aa12.27□□□□□ -0.45
HMGA1P7-201ENST00000406908 H2AFB1P0C5Y9 115 aa12.27□□□□□ -0.45
HMGA1P7-201ENST00000406908 DEFB135Q30KP9 77 aa12.27□□□□□ -0.45
HMGA1P7-201ENST00000406908 ALKAL2Q6UX46 152 aa12.27□□□□□ -0.45
HMGA1P7-201ENST00000406908 OR10J6PQ8NGY7 276 aa12.27□□□□□ -0.45
HMGA1P7-201ENST00000406908 XCL2Q9UBD3 114 aa12.27□□□□□ -0.45
HMGA1P7-201ENST00000406908 IGKV2-40A0A087WW87 121 aaPredicted RBP12.26□□□□□ -0.45
HMGA1P7-201ENST00000406908 NPIPB6E9PJ23 425 aa12.26□□□□□ -0.45
HMGA1P7-201ENST00000406908 IGKV2D-40P01614 121 aaPredicted RBP12.26□□□□□ -0.45
HMGA1P7-201ENST00000406908 NUTF2P61970 127 aaKnown RBP12.26□□□□□ -0.45
HMGA1P7-201ENST00000406908 ERCC8Q13216 396 aa12.26□□□□□ -0.45
HMGA1P7-201ENST00000406908 OVOL2Q9BRP0 275 aa12.26□□□□□ -0.45
HMGA1P7-201ENST00000406908 AGPAT4-IT1Q9H0P7 198 aa12.26□□□□□ -0.45
HMGA1P7-201ENST00000406908 ZMAT4Q9H898 229 aa12.26□□□□□ -0.45
HMGA1P7-201ENST00000406908 A0A1W2PRE2 83 aa12.25□□□□□ -0.45
HMGA1P7-201ENST00000406908 DIRC3C9JPN6 131 aa12.25□□□□□ -0.45
HMGA1P7-201ENST00000406908 SPRY2O43597 315 aa12.25□□□□□ -0.45
HMGA1P7-201ENST00000406908 CSN1S1P47710 185 aa12.25□□□□□ -0.45
HMGA1P7-201ENST00000406908 UBE2G2P60604 165 aa12.25□□□□□ -0.45
HMGA1P7-201ENST00000406908 SUMO1P63165 101 aaKnown RBP12.25□□□□□ -0.45
HMGA1P7-201ENST00000406908 CSNK1G2-AS1Q8NCQ2 148 aa12.25□□□□□ -0.45
HMGA1P7-201ENST00000406908 RXFP4Q8TDU9 374 aa12.25□□□□□ -0.45
HMGA1P7-201ENST00000406908 RNF183Q96D59 192 aa12.25□□□□□ -0.45
HMGA1P7-201ENST00000406908 RCHY1Q96PM5 261 aa12.25□□□□□ -0.45
HMGA1P7-201ENST00000406908 VGLL1Q99990 258 aa12.25□□□□□ -0.45
HMGA1P7-201ENST00000406908 YTHDF2Q9Y5A9 579 aaKnown RBP12.25□□□□□ -0.45
HMGA1P7-201ENST00000406908 FAM74A7A6NL05 159 aa12.24□□□□□ -0.45
HMGA1P7-201ENST00000406908 GGTLC3B5MD39 225 aa12.24□□□□□ -0.45
HMGA1P7-201ENST00000406908 CT45A10P0DMU9 189 aa12.24□□□□□ -0.45
HMGA1P7-201ENST00000406908 GNG5P63218 68 aa12.24□□□□□ -0.45
HMGA1P7-201ENST00000406908 CCL20P78556 96 aa12.24□□□□□ -0.45
HMGA1P7-201ENST00000406908 C9orf47Q6ZRZ4 202 aa12.24□□□□□ -0.45
HMGA1P7-201ENST00000406908 CMTM2Q8TAZ6 248 aa12.24□□□□□ -0.45
HMGA1P7-201ENST00000406908 NBEAL2Q6ZNJ1 2754 aa12.24□□□□□ -0.45
HMGA1P7-201ENST00000406908 TRAV1-1A0A0B4J248 108 aa12.23□□□□□ -0.45
HMGA1P7-201ENST00000406908 M0R2Z0 102 aa12.23□□□□□ -0.45
HMGA1P7-201ENST00000406908 SLC25A5P05141 298 aaKnown RBP12.23□□□□□ -0.45
HMGA1P7-201ENST00000406908 SPINK13Q1W4C9 94 aa12.23□□□□□ -0.45
HMGA1P7-201ENST00000406908 LINC00477Q96M19 166 aa12.23□□□□□ -0.45
HMGA1P7-201ENST00000406908 C1QTNF4Q9BXJ3 329 aa12.23□□□□□ -0.45
HMGA1P7-201ENST00000406908 PPP1R14DQ9NXH3 145 aa12.23□□□□□ -0.45
HMGA1P7-201ENST00000406908 RPH3ALQ9UNE2 315 aa12.23□□□□□ -0.45
HMGA1P7-201ENST00000406908 TP53TG1Q9Y2A0 90 aa12.23□□□□□ -0.45
HMGA1P7-201ENST00000406908 ZNF705EA8MWA4 302 aaPredicted RBP12.22□□□□□ -0.45
HMGA1P7-201ENST00000406908 CRXO43186 299 aaPredicted RBP12.22□□□□□ -0.45
HMGA1P7-201ENST00000406908 ARL6IP6Q8N6S5 226 aa12.22□□□□□ -0.45
HMGA1P7-201ENST00000406908 C5orf17Q8NAS9 161 aa12.22□□□□□ -0.45
HMGA1P7-201ENST00000406908 EPDR1Q9UM22 224 aa12.22□□□□□ -0.45
HMGA1P7-201ENST00000406908 U3KQK5 164 aa12.22□□□□□ -0.45
HMGA1P7-201ENST00000406908 TENM3Q9P273 2699 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms