RNA–Protein interactions for RNA: ENST00000406454.7

CACNA1C-222, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,590 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-222ENST00000406454 ZNF492Q9P255 531 aa10.69□□□□□ -0.7
CACNA1C-222ENST00000406454 TRGV1A0A0A0MS02 117 aa10.69□□□□□ -0.7
CACNA1C-222ENST00000406454 RPL36AP83881 106 aaKnown RBP10.69□□□□□ -0.7
CACNA1C-222ENST00000406454 RPL36ALQ969Q0 106 aaKnown RBP10.69□□□□□ -0.7
CACNA1C-222ENST00000406454 RNF223E7ERA6 249 aa10.69□□□□□ -0.7
CACNA1C-222ENST00000406454 SEC11AP67812 179 aa10.69□□□□□ -0.7
CACNA1C-222ENST00000406454 FNDC4Q9H6D8 234 aaPredicted RBP10.69□□□□□ -0.7
CACNA1C-222ENST00000406454 VCYO14598 125 aa10.69□□□□□ -0.7
CACNA1C-222ENST00000406454 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.69□□□□□ -0.7
CACNA1C-222ENST00000406454 IGHV3-64A0A075B6Q5 118 aa10.69□□□□□ -0.7
CACNA1C-222ENST00000406454 GGTLC3B5MD39 225 aa10.69□□□□□ -0.7
CACNA1C-222ENST00000406454 TMEM258P61165 79 aa10.69□□□□□ -0.7
CACNA1C-222ENST00000406454 AMN1Q8IY45 258 aa10.69□□□□□ -0.7
CACNA1C-222ENST00000406454 LAMTOR3Q9UHA4 124 aa10.69□□□□□ -0.7
CACNA1C-222ENST00000406454 SYNJ2BPP57105 145 aa10.69□□□□□ -0.7
CACNA1C-222ENST00000406454 NOTCH3Q9UM47 2321 aa10.68□□□□□ -0.7
CACNA1C-222ENST00000406454 ZNF726P1Q15940 193 aa10.68□□□□□ -0.7
CACNA1C-222ENST00000406454 MED13LQ71F56 2210 aa10.68□□□□□ -0.7
CACNA1C-222ENST00000406454 LHBP01229 141 aa10.68□□□□□ -0.7
CACNA1C-222ENST00000406454 PYY3Q5JQD4 70 aa10.68□□□□□ -0.7
CACNA1C-222ENST00000406454 DTX2Q86UW9 622 aa10.68□□□□□ -0.7
CACNA1C-222ENST00000406454 GTSF1LQ9H1H1 148 aa10.68□□□□□ -0.7
CACNA1C-222ENST00000406454 TRAV8-4A0A0B4J246 113 aa10.68□□□□□ -0.7
CACNA1C-222ENST00000406454 ZNF134P52741 427 aa10.68□□□□□ -0.7
CACNA1C-222ENST00000406454 TMEM75Q8N9X5 138 aa10.68□□□□□ -0.7
CACNA1C-222ENST00000406454 RBMY1FQ15415 496 aaKnown RBP10.68□□□□□ -0.7
CACNA1C-222ENST00000406454 CSTL1Q9H114 145 aa10.67□□□□□ -0.7
CACNA1C-222ENST00000406454 DEFB104AQ8WTQ1 72 aa10.67□□□□□ -0.7
CACNA1C-222ENST00000406454 LSM4Q9Y4Z0 139 aaKnown RBP10.67□□□□□ -0.7
CACNA1C-222ENST00000406454 PLXNA4Q9HCM2 1894 aa10.67□□□□□ -0.7
CACNA1C-222ENST00000406454 ZNF479Q96JC4 524 aa10.67□□□□□ -0.7
CACNA1C-222ENST00000406454 TRBV19A0A075B6N1 114 aa10.67□□□□□ -0.7
CACNA1C-222ENST00000406454 SMKR1H3BMG3 65 aa10.67□□□□□ -0.7
CACNA1C-222ENST00000406454 MMP23AO75900 390 aa10.67□□□□□ -0.7
CACNA1C-222ENST00000406454 NBL1P41271 181 aa10.67□□□□□ -0.7
CACNA1C-222ENST00000406454 TMEM158Q8WZ71 300 aa10.67□□□□□ -0.7
CACNA1C-222ENST00000406454 G3V318 75 aa10.67□□□□□ -0.7
CACNA1C-222ENST00000406454 VWC2LB2RUY7 222 aa10.67□□□□□ -0.7
CACNA1C-222ENST00000406454 PSCAO43653 123 aa10.67□□□□□ -0.7
CACNA1C-222ENST00000406454 ARMS2P0C7Q2 107 aa10.67□□□□□ -0.7
CACNA1C-222ENST00000406454 RNF138Q8WVD3 245 aa10.67□□□□□ -0.7
CACNA1C-222ENST00000406454 RNF166Q96A37 237 aaPredicted RBP10.67□□□□□ -0.7
CACNA1C-222ENST00000406454 A0A0U1RRA0 63 aa10.66□□□□□ -0.7
CACNA1C-222ENST00000406454 SYS1-DBNDD2H3BUS1 97 aa10.66□□□□□ -0.7
CACNA1C-222ENST00000406454 RPL35AP18077 110 aaKnown RBP10.66□□□□□ -0.7
CACNA1C-222ENST00000406454 WT1-ASQ06250 92 aa10.66□□□□□ -0.7
CACNA1C-222ENST00000406454 NLRC5Q86WI3 1866 aa10.66□□□□□ -0.7
CACNA1C-222ENST00000406454 IGHV3-53P01767 116 aa10.66□□□□□ -0.7
CACNA1C-222ENST00000406454 PFN1P07737 140 aaKnown RBP10.66□□□□□ -0.7
CACNA1C-222ENST00000406454 GUSBP1Q15486 140 aa10.66□□□□□ -0.7
CACNA1C-222ENST00000406454 MORN3Q6PF18 240 aaPredicted RBP10.66□□□□□ -0.7
CACNA1C-222ENST00000406454 hDV102S1A0JD36 115 aa10.66□□□□□ -0.7
CACNA1C-222ENST00000406454 F8WEM9 126 aa10.66□□□□□ -0.7
CACNA1C-222ENST00000406454 GAGE2EQ4V326 116 aa10.66□□□□□ -0.7
CACNA1C-222ENST00000406454 GAGE2DQ9UEU5 116 aa10.66□□□□□ -0.7
CACNA1C-222ENST00000406454 H3BMM0 161 aa10.66□□□□□ -0.7
CACNA1C-222ENST00000406454 TEX43Q6ZNM6 134 aa10.66□□□□□ -0.7
CACNA1C-222ENST00000406454 GATD1Q8NB37 220 aa10.66□□□□□ -0.7
CACNA1C-222ENST00000406454 UBE2WQ96B02 151 aa10.66□□□□□ -0.7
CACNA1C-222ENST00000406454 PRSS33Q8NF86 280 aa10.66□□□□□ -0.7
CACNA1C-222ENST00000406454 TPSG1Q9NRR2 321 aa10.66□□□□□ -0.7
CACNA1C-222ENST00000406454 IL17RELQ6ZVW7 336 aa10.66□□□□□ -0.7
CACNA1C-222ENST00000406454 PLEKHB2Q96CS7 222 aa10.66□□□□□ -0.7
CACNA1C-222ENST00000406454 HEATR5AQ86XA9 2040 aa10.66□□□□□ -0.7
CACNA1C-222ENST00000406454 C1QTNF4Q9BXJ3 329 aa10.65□□□□□ -0.7
CACNA1C-222ENST00000406454 FAM231BA6NCW3 169 aa10.65□□□□□ -0.7
CACNA1C-222ENST00000406454 HAPLN4Q86UW8 402 aa10.65□□□□□ -0.7
CACNA1C-222ENST00000406454 TMEM238C9JI98 176 aa10.65□□□□□ -0.7
CACNA1C-222ENST00000406454 DEFB131AP59861 70 aa10.65□□□□□ -0.7
CACNA1C-222ENST00000406454 A0A087WWL8 130 aa10.65□□□□□ -0.71
CACNA1C-222ENST00000406454 A0A087WX48 190 aa10.65□□□□□ -0.71
CACNA1C-222ENST00000406454 CYYR1Q96J86 154 aa10.64□□□□□ -0.71
CACNA1C-222ENST00000406454 RIPPLY3P57055 190 aa10.64□□□□□ -0.71
CACNA1C-222ENST00000406454 Q0VG73 95 aa10.64□□□□□ -0.71
CACNA1C-222ENST00000406454 DIAPH2-AS1Q14236 149 aa10.64□□□□□ -0.71
CACNA1C-222ENST00000406454 Q8NFD4 153 aa10.64□□□□□ -0.71
CACNA1C-222ENST00000406454 CD5LO43866 347 aa10.64□□□□□ -0.71
CACNA1C-222ENST00000406454 CT83Q5H943 113 aa10.64□□□□□ -0.71
CACNA1C-222ENST00000406454 KAAG1Q9UBP8 84 aa10.64□□□□□ -0.71
CACNA1C-222ENST00000406454 DKK1O94907 266 aa10.64□□□□□ -0.71
CACNA1C-222ENST00000406454 TMEM213A2RRL7 107 aa10.64□□□□□ -0.71
CACNA1C-222ENST00000406454 CHKB-CPT1BH3BT56 60 aa10.64□□□□□ -0.71
CACNA1C-222ENST00000406454 PRB2P02812 416 aaPredicted RBP10.64□□□□□ -0.71
CACNA1C-222ENST00000406454 LINC00158P58513 81 aa10.64□□□□□ -0.71
CACNA1C-222ENST00000406454 MAPK1IP1LQ8NDC0 245 aa10.64□□□□□ -0.71
CACNA1C-222ENST00000406454 C8orf49Q96NF6 230 aa10.64□□□□□ -0.71
CACNA1C-222ENST00000406454 TNFRSF6BO95407 300 aa10.63□□□□□ -0.71
CACNA1C-222ENST00000406454 ESDP10768 282 aa10.63□□□□□ -0.71
CACNA1C-222ENST00000406454 BCL6BQ8N143 479 aaPredicted RBP10.63□□□□□ -0.71
CACNA1C-222ENST00000406454 WT1P19544 449 aaPredicted RBP10.63□□□□□ -0.71
CACNA1C-222ENST00000406454 SAMD5Q5TGI4 173 aa10.63□□□□□ -0.71
CACNA1C-222ENST00000406454 TMEM86BQ8N661 226 aa10.63□□□□□ -0.71
CACNA1C-222ENST00000406454 H3BRN7 92 aa10.63□□□□□ -0.71
CACNA1C-222ENST00000406454 MEGF9Q9H1U4 602 aa10.63□□□□□ -0.71
CACNA1C-222ENST00000406454 JPT2Q9H910 190 aa10.63□□□□□ -0.71
CACNA1C-222ENST00000406454 POU2AF1Q16633 256 aa10.63□□□□□ -0.71
CACNA1C-222ENST00000406454 ERG28Q9UKR5 140 aa10.63□□□□□ -0.71
CACNA1C-222ENST00000406454 C1orf122Q6ZSJ8 110 aa10.63□□□□□ -0.71
CACNA1C-222ENST00000406454 ZNF625Q96I27 306 aaPredicted RBP10.63□□□□□ -0.71
CACNA1C-222ENST00000406454 IL15RAQ13261 267 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms