RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 SNCGO76070 127 aa12.88□□□□□ -0.35
COL4A3BP-204ENST00000405807 PLAUP00749 431 aa12.88□□□□□ -0.35
COL4A3BP-204ENST00000405807 WT1-ASQ06250 92 aa12.88□□□□□ -0.35
COL4A3BP-204ENST00000405807 RPEQ96AT9 228 aa12.88□□□□□ -0.35
COL4A3BP-204ENST00000405807 SSUH2Q9Y2M2 353 aa12.88□□□□□ -0.35
COL4A3BP-204ENST00000405807 NBEAQ8NFP9 2946 aa12.88□□□□□ -0.35
COL4A3BP-204ENST00000405807 C19orf71A6NCJ1 209 aa12.87□□□□□ -0.35
COL4A3BP-204ENST00000405807 C9JAW5 83 aa12.87□□□□□ -0.35
COL4A3BP-204ENST00000405807 LINC00322Q6ZN03 302 aaPredicted RBP12.87□□□□□ -0.35
COL4A3BP-204ENST00000405807 PCP2Q8IVA1 136 aa12.87□□□□□ -0.35
COL4A3BP-204ENST00000405807 TMEM167AQ8TBQ9 72 aa12.87□□□□□ -0.35
COL4A3BP-204ENST00000405807 CFHR4Q92496 578 aa12.87□□□□□ -0.35
COL4A3BP-204ENST00000405807 HIGD1AQ9Y241 93 aa12.87□□□□□ -0.35
COL4A3BP-204ENST00000405807 M0R1B8 84 aa12.87□□□□□ -0.35
COL4A3BP-204ENST00000405807 IGHV3-48P01763 117 aa12.87□□□□□ -0.35
COL4A3BP-204ENST00000405807 FAM106CPP0CH98 169 aa12.87□□□□□ -0.35
COL4A3BP-204ENST00000405807 ORM2P19652 201 aa12.87□□□□□ -0.35
COL4A3BP-204ENST00000405807 CD24P25063 80 aa12.87□□□□□ -0.35
COL4A3BP-204ENST00000405807 FAM106AQ4KMX7 169 aa12.87□□□□□ -0.35
COL4A3BP-204ENST00000405807 ZCCHC24Q8N2G6 241 aaKnown RBP12.87□□□□□ -0.35
COL4A3BP-204ENST00000405807 PPDPFLQ8WWR9 84 aa12.87□□□□□ -0.35
COL4A3BP-204ENST00000405807 K7EMI3 77 aa12.86□□□□□ -0.35
COL4A3BP-204ENST00000405807 LTAP01374 205 aa12.86□□□□□ -0.35
COL4A3BP-204ENST00000405807 SMCPP49901 116 aaPredicted RBP12.86□□□□□ -0.35
COL4A3BP-204ENST00000405807 UCNP55089 124 aa12.86□□□□□ -0.35
COL4A3BP-204ENST00000405807 FAM216BQ8N7L0 139 aa12.86□□□□□ -0.35
COL4A3BP-204ENST00000405807 OR13C6PQ8NH95 151 aa12.86□□□□□ -0.35
COL4A3BP-204ENST00000405807 CARD19Q96LW7 228 aa12.86□□□□□ -0.35
COL4A3BP-204ENST00000405807 ASCL2Q99929 193 aa12.86□□□□□ -0.35
COL4A3BP-204ENST00000405807 DSCAMO60469 2012 aa12.86□□□□□ -0.35
COL4A3BP-204ENST00000405807 NCR2O95944 276 aa12.86□□□□□ -0.35
COL4A3BP-204ENST00000405807 LINC01587Q99440 93 aa12.86□□□□□ -0.35
COL4A3BP-204ENST00000405807 KNTC1P50748 2209 aa12.86□□□□□ -0.35
COL4A3BP-204ENST00000405807 DSCAML1Q8TD84 2053 aa12.85□□□□□ -0.35
COL4A3BP-204ENST00000405807 TMEM262E9PQX1 116 aa12.85□□□□□ -0.35
COL4A3BP-204ENST00000405807 ZNF137PP52743 207 aa12.85□□□□□ -0.35
COL4A3BP-204ENST00000405807 PRR30Q53SZ7 412 aaPredicted RBP12.85□□□□□ -0.35
COL4A3BP-204ENST00000405807 OR4C13Q8NGP0 309 aa12.85□□□□□ -0.35
COL4A3BP-204ENST00000405807 TMEM101Q96IK0 257 aa12.85□□□□□ -0.35
COL4A3BP-204ENST00000405807 MSRB2Q9Y3D2 182 aa12.85□□□□□ -0.35
COL4A3BP-204ENST00000405807 NMUP48645 174 aa12.85□□□□□ -0.35
COL4A3BP-204ENST00000405807 TNFAIP6P98066 277 aaPredicted RBP12.85□□□□□ -0.35
COL4A3BP-204ENST00000405807 PCNX2A6NKB5 2137 aa12.85□□□□□ -0.35
COL4A3BP-204ENST00000405807 IGLV3-9A0A075B6K5 115 aa12.84□□□□□ -0.35
COL4A3BP-204ENST00000405807 J3KT08 172 aa12.84□□□□□ -0.35
COL4A3BP-204ENST00000405807 ZNF688P0C7X2 276 aa12.84□□□□□ -0.35
COL4A3BP-204ENST00000405807 CFAP126Q5VTH2 177 aa12.84□□□□□ -0.35
COL4A3BP-204ENST00000405807 KIR2DL5BQ8NHK3 375 aa12.84□□□□□ -0.35
COL4A3BP-204ENST00000405807 MAP1BP46821 2468 aaKnown RBP12.84□□□□□ -0.35
COL4A3BP-204ENST00000405807 CGB1A6NKQ9 187 aa12.84□□□□□ -0.35
COL4A3BP-204ENST00000405807 C16orf97H3BN30 126 aa12.84□□□□□ -0.35
COL4A3BP-204ENST00000405807 KLK10O43240 276 aa12.84□□□□□ -0.35
COL4A3BP-204ENST00000405807 MRPL36Q9P0J6 103 aaKnown RBP12.84□□□□□ -0.35
COL4A3BP-204ENST00000405807 TCRAP04437 139 aa12.84□□□□□ -0.35
COL4A3BP-204ENST00000405807 EMP1P54849 157 aa12.84□□□□□ -0.35
COL4A3BP-204ENST00000405807 ARRDC1-AS1Q9H2J1 176 aa12.84□□□□□ -0.35
COL4A3BP-204ENST00000405807 MDFICQ9P1T7 246 aa12.84□□□□□ -0.35
COL4A3BP-204ENST00000405807 TANC2Q9HCD6 1990 aa12.83□□□□□ -0.36
COL4A3BP-204ENST00000405807 HAX1O00165 279 aa12.83□□□□□ -0.36
COL4A3BP-204ENST00000405807 C10orf55Q5SWW7 151 aa12.83□□□□□ -0.36
COL4A3BP-204ENST00000405807 Q6ZS92 163 aa12.83□□□□□ -0.36
COL4A3BP-204ENST00000405807 LRRC75A-AS1Q8N1F1 130 aa12.83□□□□□ -0.36
COL4A3BP-204ENST00000405807 MRAPQ8TCY5 172 aa12.83□□□□□ -0.36
COL4A3BP-204ENST00000405807 CRLF1O75462 422 aa12.83□□□□□ -0.36
COL4A3BP-204ENST00000405807 COL8A1P27658 744 aa12.83□□□□□ -0.36
COL4A3BP-204ENST00000405807 PRRG2O14669 202 aa12.82□□□□□ -0.36
COL4A3BP-204ENST00000405807 ZNF138P52744 262 aa12.82□□□□□ -0.36
COL4A3BP-204ENST00000405807 PPP1R27Q86WC6 154 aa12.82□□□□□ -0.36
COL4A3BP-204ENST00000405807 Q9H3A6 140 aa12.82□□□□□ -0.36
COL4A3BP-204ENST00000405807 FBXL15Q9H469 300 aa12.82□□□□□ -0.36
COL4A3BP-204ENST00000405807 NPIPB6E9PJ23 425 aa12.82□□□□□ -0.36
COL4A3BP-204ENST00000405807 IGHV1-46P01743 117 aa12.82□□□□□ -0.36
COL4A3BP-204ENST00000405807 TRGV9Q99603 122 aa12.82□□□□□ -0.36
COL4A3BP-204ENST00000405807 TMUB1Q9BVT8 246 aa12.82□□□□□ -0.36
COL4A3BP-204ENST00000405807 EDA2RQ9HAV5 297 aa12.82□□□□□ -0.36
COL4A3BP-204ENST00000405807 CCL11P51671 97 aa12.81□□□□□ -0.36
COL4A3BP-204ENST00000405807 BOD1L1Q8NFC6 3051 aa12.81□□□□□ -0.36
COL4A3BP-204ENST00000405807 NPFFO15130 113 aa12.8□□□□□ -0.36
COL4A3BP-204ENST00000405807 GP9P14770 177 aa12.8□□□□□ -0.36
COL4A3BP-204ENST00000405807 SRSF2Q01130 221 aaKnown RBP12.8□□□□□ -0.36
COL4A3BP-204ENST00000405807 TEX36Q5VZQ5 186 aa12.8□□□□□ -0.36
COL4A3BP-204ENST00000405807 Q6ZQT7 251 aa12.8□□□□□ -0.36
COL4A3BP-204ENST00000405807 RASL11BQ9BPW5 248 aa12.8□□□□□ -0.36
COL4A3BP-204ENST00000405807 CACNA1GO43497 2377 aa12.8□□□□□ -0.36
COL4A3BP-204ENST00000405807 ZNF747Q9BV97 191 aa12.8□□□□□ -0.36
COL4A3BP-204ENST00000405807 C21orf62Q9NYP8 219 aa12.8□□□□□ -0.36
COL4A3BP-204ENST00000405807 CD59P13987 128 aa12.8□□□□□ -0.36
COL4A3BP-204ENST00000405807 C3orf36Q3SXR2 165 aa12.8□□□□□ -0.36
COL4A3BP-204ENST00000405807 VMA21Q3ZAQ7 101 aa12.8□□□□□ -0.36
COL4A3BP-204ENST00000405807 Q6Q795 121 aa12.8□□□□□ -0.36
COL4A3BP-204ENST00000405807 A0A1W2PPI3 338 aa12.79□□□□□ -0.36
COL4A3BP-204ENST00000405807 IGLV2-23P01705 113 aa12.79□□□□□ -0.36
COL4A3BP-204ENST00000405807 APOHP02749 345 aaPredicted RBP12.79□□□□□ -0.36
COL4A3BP-204ENST00000405807 TEN1Q86WV5 123 aa12.79□□□□□ -0.36
COL4A3BP-204ENST00000405807 FDCSPQ8NFU4 85 aa12.79□□□□□ -0.36
COL4A3BP-204ENST00000405807 AP5S1Q9NUS5 200 aa12.79□□□□□ -0.36
COL4A3BP-204ENST00000405807 TRAV17A0A0B4J275 112 aa12.79□□□□□ -0.36
COL4A3BP-204ENST00000405807 LINC01548A6NM66 108 aa12.79□□□□□ -0.36
COL4A3BP-204ENST00000405807 HES3Q5TGS1 186 aa12.79□□□□□ -0.36
COL4A3BP-204ENST00000405807 Q86TA4 180 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms