RNA–Protein interactions for RNA: ENST00000405240.5

RTN4-209, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,061 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-209ENST00000405240 IGLV2-18A0A075B6J9 118 aa2.98□□□□□ -1.93
RTN4-209ENST00000405240 hDV102S1A0JD36 115 aa2.98□□□□□ -1.93
RTN4-209ENST00000405240 CCL21O00585 134 aa2.98□□□□□ -1.93
RTN4-209ENST00000405240 SIVA1O15304 175 aa2.98□□□□□ -1.93
RTN4-209ENST00000405240 BUB3O43684 328 aa2.98□□□□□ -1.93
RTN4-209ENST00000405240 RAB9AP51151 201 aa2.98□□□□□ -1.93
RTN4-209ENST00000405240 ZNF138P52744 262 aa2.98□□□□□ -1.93
RTN4-209ENST00000405240 UCNP55089 124 aa2.98□□□□□ -1.93
RTN4-209ENST00000405240 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.98□□□□□ -1.93
RTN4-209ENST00000405240 THYN1Q9P016 225 aa2.98□□□□□ -1.93
RTN4-209ENST00000405240 HILPDAQ9Y5L2 63 aa2.98□□□□□ -1.93
RTN4-209ENST00000405240 TRAV8-2A0A0B4J237 113 aa2.98□□□□□ -1.93
RTN4-209ENST00000405240 TMEM189A5PLL7 270 aa2.98□□□□□ -1.93
RTN4-209ENST00000405240 SFTPCP11686 197 aa2.98□□□□□ -1.93
RTN4-209ENST00000405240 IFI27P40305 119 aaPredicted RBP2.98□□□□□ -1.93
RTN4-209ENST00000405240 LOXL1Q08397 574 aaPredicted RBP2.98□□□□□ -1.93
RTN4-209ENST00000405240 FOXE3Q13461 319 aa2.98□□□□□ -1.93
RTN4-209ENST00000405240 PLGLAQ15195 96 aa2.98□□□□□ -1.93
RTN4-209ENST00000405240 PRR31Q5SQ13 230 aa2.98□□□□□ -1.93
RTN4-209ENST00000405240 OR10AG1Q8NH19 301 aa2.98□□□□□ -1.93
RTN4-209ENST00000405240 CCDC140Q96MF4 163 aa2.98□□□□□ -1.93
RTN4-209ENST00000405240 VGLL1Q99990 258 aa2.98□□□□□ -1.93
RTN4-209ENST00000405240 AAMDCQ9H7C9 122 aa2.98□□□□□ -1.93
RTN4-209ENST00000405240 AP5S1Q9NUS5 200 aa2.98□□□□□ -1.93
RTN4-209ENST00000405240 HIF1ANQ9NWT6 349 aa2.98□□□□□ -1.93
RTN4-209ENST00000405240 RABAC1Q9UI14 185 aa2.98□□□□□ -1.93
RTN4-209ENST00000405240 SVILO95425 2214 aa2.98□□□□□ -1.93
RTN4-209ENST00000405240 ICE1Q9Y2F5 2266 aa2.98□□□□□ -1.93
RTN4-209ENST00000405240 TMEM213A2RRL7 107 aa2.98□□□□□ -1.93
RTN4-209ENST00000405240 FAM90A27PA6NNH2 459 aa2.98□□□□□ -1.93
RTN4-209ENST00000405240 D6R8Y8 96 aa2.98□□□□□ -1.93
RTN4-209ENST00000405240 LY6HO94772 140 aa2.98□□□□□ -1.93
RTN4-209ENST00000405240 TMEM11P17152 192 aa2.98□□□□□ -1.93
RTN4-209ENST00000405240 S100A7P31151 101 aa2.98□□□□□ -1.93
RTN4-209ENST00000405240 BMI1P35226 326 aa2.98□□□□□ -1.93
RTN4-209ENST00000405240 LMO4P61968 165 aa2.98□□□□□ -1.93
RTN4-209ENST00000405240 HIST1H1AQ02539 215 aaPredicted RBP2.98□□□□□ -1.93
RTN4-209ENST00000405240 SLC25A34Q6PIV7 304 aa2.98□□□□□ -1.93
RTN4-209ENST00000405240 IL17RELQ6ZVW7 336 aa2.98□□□□□ -1.93
RTN4-209ENST00000405240 BOD1L2Q8IYS8 172 aa2.98□□□□□ -1.93
RTN4-209ENST00000405240 FAM19A4Q96LR4 140 aa2.98□□□□□ -1.93
RTN4-209ENST00000405240 IGKV2-40A0A087WW87 121 aaPredicted RBP2.97□□□□□ -1.93
RTN4-209ENST00000405240 CD5LO43866 347 aa2.97□□□□□ -1.93
RTN4-209ENST00000405240 IGKV2D-40P01614 121 aaPredicted RBP2.97□□□□□ -1.93
RTN4-209ENST00000405240 HLA-DRB4P13762 266 aa2.97□□□□□ -1.93
RTN4-209ENST00000405240 HINT1P49773 126 aaPredicted RBP2.97□□□□□ -1.93
RTN4-209ENST00000405240 UNQ5815/PRO19632Q6UWF5 114 aa2.97□□□□□ -1.93
RTN4-209ENST00000405240 C9orf47Q6ZRZ4 202 aa2.97□□□□□ -1.93
RTN4-209ENST00000405240 ORMDL3Q8N138 153 aa2.97□□□□□ -1.93
RTN4-209ENST00000405240 ZNF738Q8NE65 137 aa2.97□□□□□ -1.93
RTN4-209ENST00000405240 ITLN2Q8WWU7 325 aaPredicted RBP2.97□□□□□ -1.93
RTN4-209ENST00000405240 ASCL2Q99929 193 aa2.97□□□□□ -1.93
RTN4-209ENST00000405240 TP73-AS1Q9UF72 201 aa2.97□□□□□ -1.93
RTN4-209ENST00000405240 HLA-DRB4X5D2U9 266 aa2.97□□□□□ -1.93
RTN4-209ENST00000405240 ZFHX3Q15911 3703 aa2.97□□□□□ -1.93
RTN4-209ENST00000405240 CENPVL3A0A0U1RRI6 287 aa2.97□□□□□ -1.93
RTN4-209ENST00000405240 OR2T8A6NH00 312 aa2.97□□□□□ -1.93
RTN4-209ENST00000405240 SNAI2O43623 268 aa2.97□□□□□ -1.93
RTN4-209ENST00000405240 PPBPP02775 128 aa2.97□□□□□ -1.93
RTN4-209ENST00000405240 CT45A10P0DMU9 189 aa2.97□□□□□ -1.93
RTN4-209ENST00000405240 CSN1S1P47710 185 aa2.97□□□□□ -1.93
RTN4-209ENST00000405240 PTTG1IPP53801 180 aa2.97□□□□□ -1.93
RTN4-209ENST00000405240 FOXC1Q12948 553 aa2.97□□□□□ -1.93
RTN4-209ENST00000405240 APRG1Q8IVJ8 170 aa2.97□□□□□ -1.93
RTN4-209ENST00000405240 AMN1Q8IY45 258 aa2.97□□□□□ -1.93
RTN4-209ENST00000405240 POM121L12Q8N7R1 296 aa2.97□□□□□ -1.93
RTN4-209ENST00000405240 PRELID3AQ96N28 172 aa2.97□□□□□ -1.93
RTN4-209ENST00000405240 SLC50A1Q9BRV3 221 aa2.97□□□□□ -1.93
RTN4-209ENST00000405240 ARHGAP32A7KAX9 2087 aa2.97□□□□□ -1.93
RTN4-209ENST00000405240 TRBV7-1A0A0A6YYK4 115 aa2.97□□□□□ -1.93
RTN4-209ENST00000405240 IGHV7-4-1A0A0J9YVY3 117 aa2.97□□□□□ -1.93
RTN4-209ENST00000405240 TOX4O94842 621 aa2.97□□□□□ -1.93
RTN4-209ENST00000405240 MPV17L2Q567V2 206 aa2.97□□□□□ -1.93
RTN4-209ENST00000405240 PSMG4Q5JS54 123 aa2.97□□□□□ -1.93
RTN4-209ENST00000405240 C12orf54Q6X4T0 127 aa2.97□□□□□ -1.93
RTN4-209ENST00000405240 ADAMTSL5Q6ZMM2 481 aa2.97□□□□□ -1.93
RTN4-209ENST00000405240 C5orf56Q8N8D9 126 aa2.97□□□□□ -1.93
RTN4-209ENST00000405240 FER1L6-AS1Q8NA97 138 aa2.97□□□□□ -1.93
RTN4-209ENST00000405240 ANKRD11Q6UB99 2663 aaPredicted RBP2.96□□□□□ -1.93
RTN4-209ENST00000405240 DCHS1Q96JQ0 3298 aa2.96□□□□□ -1.94
RTN4-209ENST00000405240 IGKV3D-20A0A0C4DH25 116 aa2.96□□□□□ -1.94
RTN4-209ENST00000405240 FABP5P3A8MUU1 101 aa2.96□□□□□ -1.94
RTN4-209ENST00000405240 PRAC2D3DTV9 90 aa2.96□□□□□ -1.94
RTN4-209ENST00000405240 SOCS3O14543 225 aa2.96□□□□□ -1.94
RTN4-209ENST00000405240 SCGB2A1O75556 95 aa2.96□□□□□ -1.94
RTN4-209ENST00000405240 NPYP01303 97 aa2.96□□□□□ -1.94
RTN4-209ENST00000405240 HBDP02042 147 aa2.96□□□□□ -1.94
RTN4-209ENST00000405240 HLA-DMBP28068 263 aa2.96□□□□□ -1.94
RTN4-209ENST00000405240 EFNA4P52798 201 aa2.96□□□□□ -1.94
RTN4-209ENST00000405240 RBX1P62877 108 aa2.96□□□□□ -1.94
RTN4-209ENST00000405240 BATFQ16520 125 aa2.96□□□□□ -1.94
RTN4-209ENST00000405240 C11orf21Q9P2W6 132 aa2.96□□□□□ -1.94
RTN4-209ENST00000405240 S4R3C0 116 aa2.96□□□□□ -1.94
RTN4-209ENST00000405240 CACNA1HO95180 2353 aa2.96□□□□□ -1.94
RTN4-209ENST00000405240 CBY3A6NI87 242 aa2.96□□□□□ -1.94
RTN4-209ENST00000405240 TCF21O43680 179 aa2.96□□□□□ -1.94
RTN4-209ENST00000405240 NDUFS7O75251 213 aa2.96□□□□□ -1.94
RTN4-209ENST00000405240 FA2HQ7L5A8 372 aa2.96□□□□□ -1.94
RTN4-209ENST00000405240 NRACQ8N912 160 aa2.96□□□□□ -1.94
RTN4-209ENST00000405240 MEGF9Q9H1U4 602 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms