RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 IGHV3-66A0A0C4DH42 116 aa7.55□□□□□ -1.2
SMC1B-202ENST00000404354 CT83Q5H943 113 aa7.55□□□□□ -1.2
SMC1B-202ENST00000404354 PPP1R27Q86WC6 154 aa7.55□□□□□ -1.2
SMC1B-202ENST00000404354 SIGLEC9Q9Y336 463 aa7.55□□□□□ -1.2
SMC1B-202ENST00000404354 PPIAL4CA0A0B4J2A2 164 aa7.55□□□□□ -1.2
SMC1B-202ENST00000404354 G3V4G9 280 aa7.55□□□□□ -1.2
SMC1B-202ENST00000404354 OVOL3O00110 214 aa7.55□□□□□ -1.2
SMC1B-202ENST00000404354 PPIAL4GP0DN37 164 aa7.55□□□□□ -1.2
SMC1B-202ENST00000404354 SAMD5Q5TGI4 173 aa7.55□□□□□ -1.2
SMC1B-202ENST00000404354 UFSP1Q6NVU6 142 aa7.55□□□□□ -1.2
SMC1B-202ENST00000404354 ORMDL3Q8N138 153 aa7.55□□□□□ -1.2
SMC1B-202ENST00000404354 GFRA4Q9GZZ7 299 aa7.55□□□□□ -1.2
SMC1B-202ENST00000404354 COL12A1Q99715 3063 aa7.55□□□□□ -1.2
SMC1B-202ENST00000404354 TRBV19A0A075B6N1 114 aa7.54□□□□□ -1.2
SMC1B-202ENST00000404354 H3BRM9 83 aa7.54□□□□□ -1.2
SMC1B-202ENST00000404354 LY6HO94772 140 aa7.54□□□□□ -1.2
SMC1B-202ENST00000404354 BSPH1Q075Z2 132 aa7.54□□□□□ -1.2
SMC1B-202ENST00000404354 HES1Q14469 280 aa7.54□□□□□ -1.2
SMC1B-202ENST00000404354 TMEM160Q9NX00 188 aa7.54□□□□□ -1.2
SMC1B-202ENST00000404354 ATRXP46100 2492 aa7.54□□□□□ -1.2
SMC1B-202ENST00000404354 A0A1W2PPM0 123 aa7.54□□□□□ -1.2
SMC1B-202ENST00000404354 C17orf100A8MU93 164 aa7.54□□□□□ -1.2
SMC1B-202ENST00000404354 NPIPB6E9PJ23 425 aa7.54□□□□□ -1.2
SMC1B-202ENST00000404354 SH2D1AO60880 128 aa7.54□□□□□ -1.2
SMC1B-202ENST00000404354 NDUFS7O75251 213 aa7.54□□□□□ -1.2
SMC1B-202ENST00000404354 FABP2P12104 132 aa7.54□□□□□ -1.2
SMC1B-202ENST00000404354 GATA4P43694 442 aa7.54□□□□□ -1.2
SMC1B-202ENST00000404354 ADIPOQQ15848 244 aa7.54□□□□□ -1.2
SMC1B-202ENST00000404354 SH2D6Q7Z4S9 175 aa7.54□□□□□ -1.2
SMC1B-202ENST00000404354 DYNLRB1Q9NP97 96 aa7.54□□□□□ -1.2
SMC1B-202ENST00000404354 COLQQ9Y215 455 aaPredicted RBP7.54□□□□□ -1.2
SMC1B-202ENST00000404354 IGHV3-49A0A0A0MS15 119 aa7.54□□□□□ -1.2
SMC1B-202ENST00000404354 J3KRW8 73 aa7.54□□□□□ -1.2
SMC1B-202ENST00000404354 HBDP02042 147 aa7.54□□□□□ -1.2
SMC1B-202ENST00000404354 CRYGCP07315 174 aa7.54□□□□□ -1.2
SMC1B-202ENST00000404354 LOXP28300 417 aaPredicted RBP7.54□□□□□ -1.2
SMC1B-202ENST00000404354 LEPP41159 167 aa7.54□□□□□ -1.2
SMC1B-202ENST00000404354 BOD1L2Q8IYS8 172 aa7.54□□□□□ -1.2
SMC1B-202ENST00000404354 DEFB124Q8NES8 71 aa7.54□□□□□ -1.2
SMC1B-202ENST00000404354 KLK15Q9H2R5 256 aa7.54□□□□□ -1.2
SMC1B-202ENST00000404354 K7EQM0 130 aa7.53□□□□□ -1.2
SMC1B-202ENST00000404354 M0R296 226 aa7.53□□□□□ -1.2
SMC1B-202ENST00000404354 IGHV1-8P0DP01 117 aa7.53□□□□□ -1.2
SMC1B-202ENST00000404354 FAM104BQ5XKR9 115 aa7.53□□□□□ -1.2
SMC1B-202ENST00000404354 SIGLEC15Q6ZMC9 328 aa7.53□□□□□ -1.2
SMC1B-202ENST00000404354 NPFFR1Q9GZQ6 430 aa7.53□□□□□ -1.2
SMC1B-202ENST00000404354 ANKHD1Q8IWZ3 2542 aaKnown RBP7.53□□□□□ -1.2
SMC1B-202ENST00000404354 EGR2P11161 476 aaPredicted RBP7.53□□□□□ -1.2
SMC1B-202ENST00000404354 APOBEC3AP31941 199 aaPredicted RBP7.53□□□□□ -1.2
SMC1B-202ENST00000404354 ZNF80P51504 273 aaPredicted RBP7.53□□□□□ -1.2
SMC1B-202ENST00000404354 WFDC2Q14508 124 aa7.53□□□□□ -1.2
SMC1B-202ENST00000404354 ADAMTSL5Q6ZMM2 481 aa7.53□□□□□ -1.2
SMC1B-202ENST00000404354 FOXC2Q99958 501 aa7.53□□□□□ -1.2
SMC1B-202ENST00000404354 VGLL1Q99990 258 aa7.53□□□□□ -1.2
SMC1B-202ENST00000404354 SCNM1Q9BWG6 230 aa7.53□□□□□ -1.2
SMC1B-202ENST00000404354 HSD52Q0P140 79 aa7.53□□□□□ -1.2
SMC1B-202ENST00000404354 RPEQ96AT9 228 aa7.53□□□□□ -1.2
SMC1B-202ENST00000404354 TRAV26-2A0A0B4J265 109 aa7.52□□□□□ -1.21
SMC1B-202ENST00000404354 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.52□□□□□ -1.21
SMC1B-202ENST00000404354 TMEM178BH3BS89 294 aa7.52□□□□□ -1.21
SMC1B-202ENST00000404354 SMIM13P0DJ93 91 aa7.52□□□□□ -1.21
SMC1B-202ENST00000404354 RNF125Q96EQ8 232 aa7.52□□□□□ -1.21
SMC1B-202ENST00000404354 ABHD17AQ96GS6 310 aa7.52□□□□□ -1.21
SMC1B-202ENST00000404354 TEX22C9J3V5 150 aa7.52□□□□□ -1.21
SMC1B-202ENST00000404354 H3BMG7 143 aa7.52□□□□□ -1.21
SMC1B-202ENST00000404354 MC5RP33032 325 aa7.52□□□□□ -1.21
SMC1B-202ENST00000404354 ERCC8Q13216 396 aa7.52□□□□□ -1.21
SMC1B-202ENST00000404354 SAMD13Q5VXD3 122 aa7.52□□□□□ -1.21
SMC1B-202ENST00000404354 IGHV1-3A0A0C4DH29 117 aa7.52□□□□□ -1.21
SMC1B-202ENST00000404354 AZU1P20160 251 aa7.52□□□□□ -1.21
SMC1B-202ENST00000404354 LGALS7P47929 136 aa7.52□□□□□ -1.21
SMC1B-202ENST00000404354 ETDBQ3ZM63 59 aa7.52□□□□□ -1.21
SMC1B-202ENST00000404354 ZC2HC1BQ5TFG8 222 aa7.52□□□□□ -1.21
SMC1B-202ENST00000404354 TEX36Q5VZQ5 186 aa7.52□□□□□ -1.21
SMC1B-202ENST00000404354 TMEM108Q6UXF1 575 aa7.52□□□□□ -1.21
SMC1B-202ENST00000404354 AAMDCQ9H7C9 122 aa7.52□□□□□ -1.21
SMC1B-202ENST00000404354 CUBNO60494 3623 aa7.52□□□□□ -1.21
SMC1B-202ENST00000404354 ZNF491Q8N8L2 437 aa7.51□□□□□ -1.21
SMC1B-202ENST00000404354 LINC00574Q9H8X3 128 aa7.51□□□□□ -1.21
SMC1B-202ENST00000404354 TSSC4Q9Y5U2 329 aaPredicted RBP7.51□□□□□ -1.21
SMC1B-202ENST00000404354 CELSR1Q9NYQ6 3014 aa7.51□□□□□ -1.21
SMC1B-202ENST00000404354 TRAV40A0A0B4J280 105 aa7.51□□□□□ -1.21
SMC1B-202ENST00000404354 MBD3L4A6NDZ8 208 aaPredicted RBP7.51□□□□□ -1.21
SMC1B-202ENST00000404354 MBD3L3A6NE82 208 aaPredicted RBP7.51□□□□□ -1.21
SMC1B-202ENST00000404354 MBD3L5A6NJ08 208 aaPredicted RBP7.51□□□□□ -1.21
SMC1B-202ENST00000404354 Q6ZQT7 251 aa7.51□□□□□ -1.21
SMC1B-202ENST00000404354 MBD3L2Q8NHZ7 208 aaPredicted RBP7.51□□□□□ -1.21
SMC1B-202ENST00000404354 ARPC1AQ92747 370 aa7.51□□□□□ -1.21
SMC1B-202ENST00000404354 ONECUT1Q9UBC0 465 aa7.51□□□□□ -1.21
SMC1B-202ENST00000404354 COL27A1Q8IZC6 1860 aaPredicted RBP7.51□□□□□ -1.21
SMC1B-202ENST00000404354 I3L2K1 104 aa7.51□□□□□ -1.21
SMC1B-202ENST00000404354 NDUFA3O95167 84 aa7.51□□□□□ -1.21
SMC1B-202ENST00000404354 SHANK2-AS3Q9BTD1 123 aa7.51□□□□□ -1.21
SMC1B-202ENST00000404354 TIMM23O14925 209 aa7.5□□□□□ -1.21
SMC1B-202ENST00000404354 RPS20P60866 119 aaKnown RBP7.5□□□□□ -1.21
SMC1B-202ENST00000404354 LGALS9BQ3B8N2 356 aa7.5□□□□□ -1.21
SMC1B-202ENST00000404354 LGALS9CQ6DKI2 356 aa7.5□□□□□ -1.21
SMC1B-202ENST00000404354 RNF182Q8N6D2 247 aa7.5□□□□□ -1.21
SMC1B-202ENST00000404354 FAM169BQ8N8A8 192 aa7.5□□□□□ -1.21
SMC1B-202ENST00000404354 CHAC1Q9BUX1 264 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms