RNA–Protein interactions for RNA: ENST00000404040.5

HDAC11-204, Transcript of histone deacetylase 11, humanhuman

TSL 3 BASIC

Gene HDAC11, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-204ENST00000404040 SOCS3O14543 225 aa13.04□□□□□ -0.32
HDAC11-204ENST00000404040 OR7C2O60412 319 aa13.04□□□□□ -0.32
HDAC11-204ENST00000404040 ZNF253O75346 499 aa13.04□□□□□ -0.32
HDAC11-204ENST00000404040 IGLC2P0DOY2 106 aa13.04□□□□□ -0.32
HDAC11-204ENST00000404040 DEFB131AP59861 70 aa13.04□□□□□ -0.32
HDAC11-204ENST00000404040 PDE6HQ13956 83 aa13.04□□□□□ -0.32
HDAC11-204ENST00000404040 FAM122CQ6P4D5 195 aa13.04□□□□□ -0.32
HDAC11-204ENST00000404040 C9orf62Q8N4C0 152 aa13.04□□□□□ -0.32
HDAC11-204ENST00000404040 PAXXQ9BUH6 204 aa13.04□□□□□ -0.32
HDAC11-204ENST00000404040 RFNGQ9Y644 331 aa13.04□□□□□ -0.32
HDAC11-204ENST00000404040 DNAH2Q9P225 4427 aa13.03□□□□□ -0.32
HDAC11-204ENST00000404040 PSMG4Q5JS54 123 aa13.03□□□□□ -0.32
HDAC11-204ENST00000404040 SPATA31B1PQ5VZV4 182 aa13.03□□□□□ -0.32
HDAC11-204ENST00000404040 FAM167A-AS1Q96KT0 104 aa13.03□□□□□ -0.32
HDAC11-204ENST00000404040 RPRMQ9NS64 109 aa13.03□□□□□ -0.32
HDAC11-204ENST00000404040 APLNQ9ULZ1 77 aa13.03□□□□□ -0.32
HDAC11-204ENST00000404040 DEFB4AO15263 64 aa13.02□□□□□ -0.33
HDAC11-204ENST00000404040 PSG9Q00887 426 aa13.02□□□□□ -0.33
HDAC11-204ENST00000404040 FAM24BQ8N5W8 94 aa13.02□□□□□ -0.33
HDAC11-204ENST00000404040 LINC00052Q96N35 136 aa13.02□□□□□ -0.33
HDAC11-204ENST00000404040 CA1P00915 261 aaPredicted RBP13.01□□□□□ -0.33
HDAC11-204ENST00000404040 DPPA3Q6W0C5 159 aa13.01□□□□□ -0.33
HDAC11-204ENST00000404040 RNF141Q8WVD5 230 aa13.01□□□□□ -0.33
HDAC11-204ENST00000404040 ZNF331Q9NQX6 463 aaPredicted RBP13.01□□□□□ -0.33
HDAC11-204ENST00000404040 TRBV19A0A075B6N1 114 aa13□□□□□ -0.33
HDAC11-204ENST00000404040 CTXND1A0A1B0GTU2 59 aa13□□□□□ -0.33
HDAC11-204ENST00000404040 IGLL5B9A064 214 aa13□□□□□ -0.33
HDAC11-204ENST00000404040 H3BQ15 152 aa13□□□□□ -0.33
HDAC11-204ENST00000404040 NBEAP1P0C6P0 100 aa13□□□□□ -0.33
HDAC11-204ENST00000404040 STAG3L2P0CL84 134 aa13□□□□□ -0.33
HDAC11-204ENST00000404040 STAG3L3P0CL85 134 aa13□□□□□ -0.33
HDAC11-204ENST00000404040 PYYP10082 97 aa13□□□□□ -0.33
HDAC11-204ENST00000404040 RAB5CP51148 216 aa13□□□□□ -0.33
HDAC11-204ENST00000404040 UBE2L3P68036 154 aaKnown RBP13□□□□□ -0.33
HDAC11-204ENST00000404040 LINC00336Q6ZUF6 198 aa13□□□□□ -0.33
HDAC11-204ENST00000404040 STHQ8IWL8 128 aa13□□□□□ -0.33
HDAC11-204ENST00000404040 RAB24Q969Q5 203 aa13□□□□□ -0.33
HDAC11-204ENST00000404040 C17orf77Q96MU5 243 aa13□□□□□ -0.33
HDAC11-204ENST00000404040 AAMDCQ9H7C9 122 aa13□□□□□ -0.33
HDAC11-204ENST00000404040 ZNF586Q9NXT0 402 aa13□□□□□ -0.33
HDAC11-204ENST00000404040 DNAH17Q9UFH2 4485 aa13□□□□□ -0.33
HDAC11-204ENST00000404040 C11orf94C9JXX5 98 aa12.99□□□□□ -0.33
HDAC11-204ENST00000404040 CXorf1O96002 111 aa12.99□□□□□ -0.33
HDAC11-204ENST00000404040 EBLN2Q6P2I7 272 aa12.99□□□□□ -0.33
HDAC11-204ENST00000404040 FOXI2Q6ZQN5 318 aa12.99□□□□□ -0.33
HDAC11-204ENST00000404040 Q8NAQ8 132 aa12.99□□□□□ -0.33
HDAC11-204ENST00000404040 FXYD5Q96DB9 178 aa12.99□□□□□ -0.33
HDAC11-204ENST00000404040 SAT2Q96F10 170 aaPredicted RBP12.99□□□□□ -0.33
HDAC11-204ENST00000404040 PRELID1Q9Y255 219 aa12.99□□□□□ -0.33
HDAC11-204ENST00000404040 A0A1B0GVY2 172 aa12.98□□□□□ -0.33
HDAC11-204ENST00000404040 OR10J4P0C629 311 aa12.98□□□□□ -0.33
HDAC11-204ENST00000404040 PSG3Q16557 428 aa12.98□□□□□ -0.33
HDAC11-204ENST00000404040 LYPD1Q8N2G4 141 aa12.98□□□□□ -0.33
HDAC11-204ENST00000404040 ZNF738Q8NE65 137 aa12.98□□□□□ -0.33
HDAC11-204ENST00000404040 BLNKQ8WV28 456 aa12.98□□□□□ -0.33
HDAC11-204ENST00000404040 TMEM167BQ9NRX6 74 aa12.98□□□□□ -0.33
HDAC11-204ENST00000404040 TRAV8-2A0A0B4J237 113 aa12.97□□□□□ -0.33
HDAC11-204ENST00000404040 TMED6Q8WW62 240 aa12.97□□□□□ -0.33
HDAC11-204ENST00000404040 MRPL53Q96EL3 112 aaKnown RBP12.97□□□□□ -0.33
HDAC11-204ENST00000404040 PHYHIPLQ96FC7 376 aa12.97□□□□□ -0.33
HDAC11-204ENST00000404040 SAV1Q9H4B6 383 aaPredicted RBP12.97□□□□□ -0.33
HDAC11-204ENST00000404040 DNAH11Q96DT5 4516 aa12.97□□□□□ -0.33
HDAC11-204ENST00000404040 DUSP14O95147 198 aaKnown RBP12.96□□□□□ -0.33
HDAC11-204ENST00000404040 ARL14EPLP0DKL9 152 aa12.96□□□□□ -0.33
HDAC11-204ENST00000404040 MED14OSP0DP75 135 aa12.96□□□□□ -0.33
HDAC11-204ENST00000404040 HLA-DRB4P13762 266 aa12.96□□□□□ -0.33
HDAC11-204ENST00000404040 NKX2-5P52952 324 aaPredicted RBP12.96□□□□□ -0.33
HDAC11-204ENST00000404040 NUTF2P61970 127 aaKnown RBP12.96□□□□□ -0.33
HDAC11-204ENST00000404040 ACTL10Q5JWF8 245 aa12.96□□□□□ -0.33
HDAC11-204ENST00000404040 FAM74A1Q5RGS3 127 aa12.96□□□□□ -0.33
HDAC11-204ENST00000404040 ZNF503Q96F45 646 aa12.96□□□□□ -0.33
HDAC11-204ENST00000404040 HLA-DRB4X5D2U9 266 aa12.96□□□□□ -0.33
HDAC11-204ENST00000404040 DYNC1H1Q14204 4646 aaKnown RBP12.96□□□□□ -0.34
HDAC11-204ENST00000404040 H3BTX0 84 aa12.95□□□□□ -0.34
HDAC11-204ENST00000404040 SLC17A3O00476 420 aa12.95□□□□□ -0.34
HDAC11-204ENST00000404040 HMGB3O15347 200 aaKnown RBP12.95□□□□□ -0.34
HDAC11-204ENST00000404040 SNRPCP09234 159 aaKnown RBP12.95□□□□□ -0.34
HDAC11-204ENST00000404040 MORN3Q6PF18 240 aaPredicted RBP12.95□□□□□ -0.34
HDAC11-204ENST00000404040 RNF182Q8N6D2 247 aa12.95□□□□□ -0.34
HDAC11-204ENST00000404040 C20orf173Q96LM9 149 aa12.95□□□□□ -0.34
HDAC11-204ENST00000404040 CLUHP3Q96NS8 147 aa12.95□□□□□ -0.34
HDAC11-204ENST00000404040 IGHV4-4A0A075B6R2 117 aa12.94□□□□□ -0.34
HDAC11-204ENST00000404040 IGHV4-28A0A0C4DH34 117 aa12.94□□□□□ -0.34
HDAC11-204ENST00000404040 MAP1LC3B2A6NCE7 125 aa12.94□□□□□ -0.34
HDAC11-204ENST00000404040 KNCNA6PVL3 124 aa12.94□□□□□ -0.34
HDAC11-204ENST00000404040 TEX46H3BTG2 121 aa12.94□□□□□ -0.34
HDAC11-204ENST00000404040 NDUFB4O95168 129 aa12.94□□□□□ -0.34
HDAC11-204ENST00000404040 HLA-DMBP28068 263 aa12.94□□□□□ -0.34
HDAC11-204ENST00000404040 GCHFRP30047 84 aa12.94□□□□□ -0.34
HDAC11-204ENST00000404040 TRPT1Q86TN4 253 aaKnown RBP12.94□□□□□ -0.34
HDAC11-204ENST00000404040 FAM213BQ8TBF2 198 aa12.94□□□□□ -0.34
HDAC11-204ENST00000404040 RPUSD4Q96CM3 377 aaKnown RBP12.94□□□□□ -0.34
HDAC11-204ENST00000404040 MAP1LC3BQ9GZQ8 125 aa12.94□□□□□ -0.34
HDAC11-204ENST00000404040 A0A0J9YX75 114 aa12.93□□□□□ -0.34
HDAC11-204ENST00000404040 H3BMM0 161 aa12.93□□□□□ -0.34
HDAC11-204ENST00000404040 RBMY1A1P0DJD3 496 aaKnown RBP12.93□□□□□ -0.34
HDAC11-204ENST00000404040 RBMY1CP0DJD4 496 aa12.93□□□□□ -0.34
HDAC11-204ENST00000404040 CSN1S1P47710 185 aa12.93□□□□□ -0.34
HDAC11-204ENST00000404040 RBMY1FQ15415 496 aaKnown RBP12.93□□□□□ -0.34
HDAC11-204ENST00000404040 ZNF726P1Q15940 193 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 139.9 ms