RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 DEFB130AP0DP74 79 aa10.84□□□□□ -0.67
TPM1-207ENST00000403994 FGF7P21781 194 aa10.84□□□□□ -0.67
TPM1-207ENST00000403994 S100A11P31949 105 aa10.84□□□□□ -0.67
TPM1-207ENST00000403994 RPL29P47914 159 aaKnown RBP10.84□□□□□ -0.67
TPM1-207ENST00000403994 KIR3DS1Q14943 382 aa10.84□□□□□ -0.67
TPM1-207ENST00000403994 OR10J6PQ8NGY7 276 aa10.84□□□□□ -0.67
TPM1-207ENST00000403994 SAT2Q96F10 170 aaPredicted RBP10.84□□□□□ -0.67
TPM1-207ENST00000403994 GPN1Q9HCN4 374 aaPredicted RBP10.84□□□□□ -0.67
TPM1-207ENST00000403994 HTN1P15515 57 aa10.83□□□□□ -0.68
TPM1-207ENST00000403994 GUK1Q16774 197 aa10.83□□□□□ -0.68
TPM1-207ENST00000403994 GFI1BQ5VTD9 330 aa10.83□□□□□ -0.68
TPM1-207ENST00000403994 C15orf53Q8NAA6 179 aa10.83□□□□□ -0.68
TPM1-207ENST00000403994 ENKURQ8TC29 256 aa10.83□□□□□ -0.68
TPM1-207ENST00000403994 RNASE8Q8TDE3 154 aaKnown RBP10.83□□□□□ -0.68
TPM1-207ENST00000403994 CHAC2Q8WUX2 184 aa10.83□□□□□ -0.68
TPM1-207ENST00000403994 IGLV2-18A0A075B6J9 118 aa10.82□□□□□ -0.68
TPM1-207ENST00000403994 H7BYZ3 331 aa10.82□□□□□ -0.68
TPM1-207ENST00000403994 RTL8CO15255 209 aa10.82□□□□□ -0.68
TPM1-207ENST00000403994 ZNF253O75346 499 aa10.82□□□□□ -0.68
TPM1-207ENST00000403994 UPK1BO75841 260 aa10.82□□□□□ -0.68
TPM1-207ENST00000403994 FCN2Q15485 313 aa10.82□□□□□ -0.68
TPM1-207ENST00000403994 LGALS9BQ3B8N2 356 aa10.82□□□□□ -0.68
TPM1-207ENST00000403994 RNF212Q495C1 297 aa10.82□□□□□ -0.68
TPM1-207ENST00000403994 TMEM263Q8WUH6 116 aaKnown RBP10.82□□□□□ -0.68
TPM1-207ENST00000403994 C20orf144Q9BQM9 153 aa10.82□□□□□ -0.68
TPM1-207ENST00000403994 NPCDR1Q9BY65 106 aa10.82□□□□□ -0.68
TPM1-207ENST00000403994 ZNF586Q9NXT0 402 aa10.82□□□□□ -0.68
TPM1-207ENST00000403994 DYNC1H1Q14204 4646 aaKnown RBP10.81□□□□□ -0.68
TPM1-207ENST00000403994 DNAH11Q96DT5 4516 aa10.81□□□□□ -0.68
TPM1-207ENST00000403994 A0A1B0GVY2 172 aa10.81□□□□□ -0.68
TPM1-207ENST00000403994 NPIPB6E9PJ23 425 aa10.81□□□□□ -0.68
TPM1-207ENST00000403994 MPDU1O75352 247 aa10.81□□□□□ -0.68
TPM1-207ENST00000403994 SIX6O95475 246 aa10.81□□□□□ -0.68
TPM1-207ENST00000403994 ZNF493Q6ZR52 646 aa10.81□□□□□ -0.68
TPM1-207ENST00000403994 Q6ZR54 194 aa10.81□□□□□ -0.68
TPM1-207ENST00000403994 ODF3Q96PU9 254 aa10.81□□□□□ -0.68
TPM1-207ENST00000403994 TIMM8BQ9Y5J9 83 aaPredicted RBP10.81□□□□□ -0.68
TPM1-207ENST00000403994 TRBV19A0A075B6N1 114 aa10.8□□□□□ -0.68
TPM1-207ENST00000403994 F5H768 121 aa10.8□□□□□ -0.68
TPM1-207ENST00000403994 ATP5G1P05496 136 aa10.8□□□□□ -0.68
TPM1-207ENST00000403994 ATP5G3P48201 142 aa10.8□□□□□ -0.68
TPM1-207ENST00000403994 IFITM3Q01628 133 aa10.8□□□□□ -0.68
TPM1-207ENST00000403994 ATP6V1FQ16864 119 aa10.8□□□□□ -0.68
TPM1-207ENST00000403994 GCSAMLQ5JQS6 135 aa10.8□□□□□ -0.68
TPM1-207ENST00000403994 THAP6Q8TBB0 222 aa10.8□□□□□ -0.68
TPM1-207ENST00000403994 MRPL53Q96EL3 112 aaKnown RBP10.8□□□□□ -0.68
TPM1-207ENST00000403994 TMEM14CQ9P0S9 112 aa10.8□□□□□ -0.68
TPM1-207ENST00000403994 PCLOQ9Y6V0 5065 aa10.8□□□□□ -0.68
TPM1-207ENST00000403994 J3KRW8 73 aa10.79□□□□□ -0.68
TPM1-207ENST00000403994 M0R3E3 92 aa10.79□□□□□ -0.68
TPM1-207ENST00000403994 CT45A10P0DMU9 189 aa10.79□□□□□ -0.68
TPM1-207ENST00000403994 PYYP10082 97 aa10.79□□□□□ -0.68
TPM1-207ENST00000403994 LEPP41159 167 aa10.79□□□□□ -0.68
TPM1-207ENST00000403994 PDE6HQ13956 83 aa10.79□□□□□ -0.68
TPM1-207ENST00000403994 LRRC37A5PQ49AS3 106 aa10.79□□□□□ -0.68
TPM1-207ENST00000403994 OR5C1Q8NGR4 320 aa10.79□□□□□ -0.68
TPM1-207ENST00000403994 NMES1Q9C002 83 aa10.79□□□□□ -0.68
TPM1-207ENST00000403994 NOP10Q9NPE3 64 aaKnown RBP10.79□□□□□ -0.68
TPM1-207ENST00000403994 PTTG2Q9NZH5 202 aa10.79□□□□□ -0.68
TPM1-207ENST00000403994 OR5AC2Q9NZP5 309 aa10.79□□□□□ -0.68
TPM1-207ENST00000403994 CBY3A6NI87 242 aa10.78□□□□□ -0.68
TPM1-207ENST00000403994 PRSS29PA6NIE9 313 aa10.78□□□□□ -0.68
TPM1-207ENST00000403994 PRAF2O60831 178 aa10.78□□□□□ -0.68
TPM1-207ENST00000403994 NDUFB4O95168 129 aa10.78□□□□□ -0.68
TPM1-207ENST00000403994 NHLH2Q02577 135 aa10.78□□□□□ -0.68
TPM1-207ENST00000403994 E5RGE8 158 aa10.77□□□□□ -0.69
TPM1-207ENST00000403994 H0YIZ8 118 aa10.77□□□□□ -0.69
TPM1-207ENST00000403994 HIST1H1EP10412 219 aaKnown RBP10.77□□□□□ -0.69
TPM1-207ENST00000403994 FAM3BP58499 235 aaPredicted RBP10.77□□□□□ -0.69
TPM1-207ENST00000403994 CLINT1Q14677 625 aa10.77□□□□□ -0.69
TPM1-207ENST00000403994 LINC00612Q8N6U2 182 aa10.77□□□□□ -0.69
TPM1-207ENST00000403994 SLC25A2Q9BXI2 301 aa10.77□□□□□ -0.69
TPM1-207ENST00000403994 SLC25A31Q9H0C2 315 aa10.77□□□□□ -0.69
TPM1-207ENST00000403994 TRAV12-3A0A0B4J271 114 aa10.76□□□□□ -0.69
TPM1-207ENST00000403994 A6NHS1 94 aa10.76□□□□□ -0.69
TPM1-207ENST00000403994 NUDT3O95989 172 aa10.76□□□□□ -0.69
TPM1-207ENST00000403994 H2BFSP57053 126 aa10.76□□□□□ -0.69
TPM1-207ENST00000403994 BLNKQ8WV28 456 aa10.76□□□□□ -0.69
TPM1-207ENST00000403994 RNF141Q8WVD5 230 aa10.76□□□□□ -0.69
TPM1-207ENST00000403994 FAM167A-AS1Q96KT0 104 aa10.76□□□□□ -0.69
TPM1-207ENST00000403994 ATG101Q9BSB4 218 aa10.76□□□□□ -0.69
TPM1-207ENST00000403994 INMT-MINDY4F8WBC2 141 aa10.75□□□□□ -0.69
TPM1-207ENST00000403994 RLN2P04090 185 aa10.75□□□□□ -0.69
TPM1-207ENST00000403994 ERCC8Q13216 396 aa10.75□□□□□ -0.69
TPM1-207ENST00000403994 MIR17HGQ75NE6 70 aa10.75□□□□□ -0.69
TPM1-207ENST00000403994 CCDC28AQ8IWP9 274 aa10.75□□□□□ -0.69
TPM1-207ENST00000403994 EXOC3-AS1Q8N2X6 119 aa10.75□□□□□ -0.69
TPM1-207ENST00000403994 KCNIP2Q9NS61 270 aa10.75□□□□□ -0.69
TPM1-207ENST00000403994 PRELID1Q9Y255 219 aa10.75□□□□□ -0.69
TPM1-207ENST00000403994 TIMM9Q9Y5J7 89 aa10.75□□□□□ -0.69
TPM1-207ENST00000403994 C7orf71A4D174 169 aa10.74□□□□□ -0.69
TPM1-207ENST00000403994 KLLNB2CW77 178 aa10.74□□□□□ -0.69
TPM1-207ENST00000403994 SLC25A5P05141 298 aaKnown RBP10.74□□□□□ -0.69
TPM1-207ENST00000403994 PPP1R1CQ8WVI7 109 aa10.74□□□□□ -0.69
TPM1-207ENST00000403994 FAM19A4Q96LR4 140 aa10.74□□□□□ -0.69
TPM1-207ENST00000403994 PYGO2Q9BRQ0 406 aa10.74□□□□□ -0.69
TPM1-207ENST00000403994 MARVELD1Q9BSK0 173 aa10.74□□□□□ -0.69
TPM1-207ENST00000403994 WDR61Q9GZS3 305 aaKnown RBP10.74□□□□□ -0.69
TPM1-207ENST00000403994 IGKV2-40A0A087WW87 121 aaPredicted RBP10.73□□□□□ -0.69
TPM1-207ENST00000403994 GAGE12BA1L429 117 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 132.2 ms