RNA–Protein interactions for RNA: ENST00000402326.1

CBX3P9-201, Transcript of chromobox 3 pseudogene 9, humanhuman

BASIC

Gene CBX3P9, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P9-201ENST00000402326 MYLKQ15746 1914 aa0.69□□□□□ -2.3
CBX3P9-201ENST00000402326 RTL9Q8NET4 1388 aa0.69□□□□□ -2.3
CBX3P9-201ENST00000402326 KIAA1549Q9HCM3 1950 aa0.68□□□□□ -2.3
CBX3P9-201ENST00000402326 ALPK3Q96L96 1907 aa0.68□□□□□ -2.3
CBX3P9-201ENST00000402326 E7EQ34 232 aa0.68□□□□□ -2.3
CBX3P9-201ENST00000402326 H3BRM9 83 aa0.68□□□□□ -2.3
CBX3P9-201ENST00000402326 LYRM1O43325 122 aa0.68□□□□□ -2.3
CBX3P9-201ENST00000402326 NUPR1O60356 82 aa0.68□□□□□ -2.3
CBX3P9-201ENST00000402326 PFDN1O60925 122 aa0.68□□□□□ -2.3
CBX3P9-201ENST00000402326 TECTAO75443 2155 aa0.68□□□□□ -2.3
CBX3P9-201ENST00000402326 S100GP29377 79 aa0.68□□□□□ -2.3
CBX3P9-201ENST00000402326 SDC2P34741 201 aa0.68□□□□□ -2.3
CBX3P9-201ENST00000402326 SAMD13Q5VXD3 122 aa0.68□□□□□ -2.3
CBX3P9-201ENST00000402326 LINC00322Q6ZN03 302 aaPredicted RBP0.68□□□□□ -2.3
CBX3P9-201ENST00000402326 ANKRD31Q8N7Z5 1873 aa0.68□□□□□ -2.3
CBX3P9-201ENST00000402326 THEM6Q8WUY1 208 aa0.68□□□□□ -2.3
CBX3P9-201ENST00000402326 ISOC1Q96CN7 298 aa0.68□□□□□ -2.3
CBX3P9-201ENST00000402326 DDA1Q9BW61 102 aa0.68□□□□□ -2.3
CBX3P9-201ENST00000402326 TMEM138Q9NPI0 162 aa0.68□□□□□ -2.3
CBX3P9-201ENST00000402326 TMEM14CQ9P0S9 112 aa0.68□□□□□ -2.3
CBX3P9-201ENST00000402326 TRAPPC8Q9Y2L5 1435 aa0.68□□□□□ -2.3
CBX3P9-201ENST00000402326 HEATR1Q9H583 2144 aaKnown RBP0.68□□□□□ -2.3
CBX3P9-201ENST00000402326 RFX7Q2KHR2 1363 aa0.68□□□□□ -2.3
CBX3P9-201ENST00000402326 ZCCHC11Q5TAX3 1644 aaKnown RBP0.67□□□□□ -2.3
CBX3P9-201ENST00000402326 PHRF1Q9P1Y6 1649 aaKnown RBP0.67□□□□□ -2.3
CBX3P9-201ENST00000402326 NUP210Q8TEM1 1887 aaPredicted RBP0.67□□□□□ -2.3
CBX3P9-201ENST00000402326 CASP8AP2Q9UKL3 1982 aa0.67□□□□□ -2.3
CBX3P9-201ENST00000402326 SIP14410 1827 aa0.67□□□□□ -2.3
CBX3P9-201ENST00000402326 GNG14A0A1W2PPG7 69 aa0.67□□□□□ -2.3
CBX3P9-201ENST00000402326 FABP4P15090 132 aa0.67□□□□□ -2.3
CBX3P9-201ENST00000402326 COX7CP15954 63 aa0.67□□□□□ -2.3
CBX3P9-201ENST00000402326 RPS3P23396 243 aaKnown RBP eCLIP0.67□□□□□ -2.3
CBX3P9-201ENST00000402326 POLR2HP52434 150 aaKnown RBP0.67□□□□□ -2.3
CBX3P9-201ENST00000402326 PSG9Q00887 426 aa0.67□□□□□ -2.3
CBX3P9-201ENST00000402326 CIRBPQ14011 172 aaKnown RBP0.67□□□□□ -2.3
CBX3P9-201ENST00000402326 VMA21Q3ZAQ7 101 aa0.67□□□□□ -2.3
CBX3P9-201ENST00000402326 TMEM128Q5BJH2 165 aa0.67□□□□□ -2.3
CBX3P9-201ENST00000402326 LINC00305Q7Z4B0 112 aa0.67□□□□□ -2.3
CBX3P9-201ENST00000402326 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.67□□□□□ -2.3
CBX3P9-201ENST00000402326 OR5H6Q8NGV6 325 aa0.67□□□□□ -2.3
CBX3P9-201ENST00000402326 ZNF431Q8TF32 576 aaPredicted RBP0.67□□□□□ -2.3
CBX3P9-201ENST00000402326 LAMTOR2Q9Y2Q5 125 aa0.67□□□□□ -2.3
CBX3P9-201ENST00000402326 TPRKBQ9Y3C4 175 aa0.67□□□□□ -2.3
CBX3P9-201ENST00000402326 MED31Q9Y3C7 131 aa0.67□□□□□ -2.3
CBX3P9-201ENST00000402326 NCOA6Q14686 2063 aaPredicted RBP0.67□□□□□ -2.3
CBX3P9-201ENST00000402326 C5orf58C9J3I9 102 aa0.66□□□□□ -2.3
CBX3P9-201ENST00000402326 PPYP01298 95 aa0.66□□□□□ -2.3
CBX3P9-201ENST00000402326 DIAPH2-AS1Q14236 149 aa0.66□□□□□ -2.3
CBX3P9-201ENST00000402326 DEFB115Q30KQ5 88 aa0.66□□□□□ -2.3
CBX3P9-201ENST00000402326 HAGHLQ6PII5 290 aaPredicted RBP0.66□□□□□ -2.3
CBX3P9-201ENST00000402326 FOXI2Q6ZQN5 318 aa0.66□□□□□ -2.3
CBX3P9-201ENST00000402326 ZCCHC23Q6ZST2 131 aa0.66□□□□□ -2.3
CBX3P9-201ENST00000402326 OR4B1Q8NGF8 309 aa0.66□□□□□ -2.3
CBX3P9-201ENST00000402326 CLEC2BQ92478 149 aa0.66□□□□□ -2.3
CBX3P9-201ENST00000402326 PSMF1Q92530 271 aa0.66□□□□□ -2.3
CBX3P9-201ENST00000402326 DIRC1Q969H9 104 aa0.66□□□□□ -2.3
CBX3P9-201ENST00000402326 PRELID3AQ96N28 172 aa0.66□□□□□ -2.3
CBX3P9-201ENST00000402326 CCDC115Q96NT0 180 aa0.66□□□□□ -2.3
CBX3P9-201ENST00000402326 OR4C12Q96R67 309 aa0.66□□□□□ -2.3
CBX3P9-201ENST00000402326 WFDC10AQ9H1F0 79 aa0.66□□□□□ -2.3
CBX3P9-201ENST00000402326 TCEAL2Q9H3H9 227 aaPredicted RBP0.66□□□□□ -2.3
CBX3P9-201ENST00000402326 FKBP11Q9NYL4 201 aa0.66□□□□□ -2.3
CBX3P9-201ENST00000402326 PEAK1Q9H792 1746 aa0.66□□□□□ -2.3
CBX3P9-201ENST00000402326 COL1A1P02452 1464 aaPredicted RBP0.66□□□□□ -2.3
CBX3P9-201ENST00000402326 TCOF1Q13428 1488 aaKnown RBP0.66□□□□□ -2.3
CBX3P9-201ENST00000402326 BCL9O00512 1426 aa0.65□□□□□ -2.3
CBX3P9-201ENST00000402326 KIAA1107Q9UPP5 1409 aa0.65□□□□□ -2.3
CBX3P9-201ENST00000402326 ROS1P08922 2347 aa0.65□□□□□ -2.3
CBX3P9-201ENST00000402326 DLC1Q96QB1 1528 aa0.65□□□□□ -2.31
CBX3P9-201ENST00000402326 A0A096LPI6 279 aa0.65□□□□□ -2.31
CBX3P9-201ENST00000402326 LOC107984640A0A0U1RRK4 108 aa0.65□□□□□ -2.31
CBX3P9-201ENST00000402326 PRORSD1PA6NEY8 169 aa0.65□□□□□ -2.31
CBX3P9-201ENST00000402326 TSTD3H0UI37 97 aa0.65□□□□□ -2.31
CBX3P9-201ENST00000402326 M0QZK8 103 aa0.65□□□□□ -2.31
CBX3P9-201ENST00000402326 NCR3O14931 201 aa0.65□□□□□ -2.31
CBX3P9-201ENST00000402326 FAM107AO95990 144 aa0.65□□□□□ -2.31
CBX3P9-201ENST00000402326 NDUFA6P56556 154 aa0.65□□□□□ -2.31
CBX3P9-201ENST00000402326 MRPS36P82909 103 aaKnown RBP0.65□□□□□ -2.31
CBX3P9-201ENST00000402326 DR1Q01658 176 aa0.65□□□□□ -2.31
CBX3P9-201ENST00000402326 MIR22HGQ0VDD5 57 aa0.65□□□□□ -2.31
CBX3P9-201ENST00000402326 TOMM20LQ6UXN7 152 aa0.65□□□□□ -2.31
CBX3P9-201ENST00000402326 TAC4Q86UU9 113 aa0.65□□□□□ -2.31
CBX3P9-201ENST00000402326 LINC00269Q8N2A0 174 aa0.65□□□□□ -2.31
CBX3P9-201ENST00000402326 PLPP5Q8NEB5 264 aa0.65□□□□□ -2.31
CBX3P9-201ENST00000402326 CCL4L1Q8NHW4 92 aa0.65□□□□□ -2.31
CBX3P9-201ENST00000402326 MCEEQ96PE7 176 aa0.65□□□□□ -2.31
CBX3P9-201ENST00000402326 AMELYQ99218 206 aa0.65□□□□□ -2.31
CBX3P9-201ENST00000402326 LXNQ9BS40 222 aa0.65□□□□□ -2.31
CBX3P9-201ENST00000402326 LIMD2Q9BT23 127 aa0.65□□□□□ -2.31
CBX3P9-201ENST00000402326 CST11Q9H112 138 aa0.65□□□□□ -2.31
CBX3P9-201ENST00000402326 TNFSF18Q9UNG2 199 aa0.65□□□□□ -2.31
CBX3P9-201ENST00000402326 PTPRFP10586 1907 aa0.65□□□□□ -2.31
CBX3P9-201ENST00000402326 AHNAKQ09666 5890 aaKnown RBP0.65□□□□□ -2.31
CBX3P9-201ENST00000402326 UNC13AQ9UPW8 1703 aa0.64□□□□□ -2.31
CBX3P9-201ENST00000402326 TRAV23DV6A0A075B6W5 121 aa0.64□□□□□ -2.31
CBX3P9-201ENST00000402326 TRAV13-1A0A0B4J241 112 aa0.64□□□□□ -2.31
CBX3P9-201ENST00000402326 TRBV27A0A0K0K1C4 114 aa0.64□□□□□ -2.31
CBX3P9-201ENST00000402326 JMJD7-PLA2G4BH0Y9G9 81 aa0.64□□□□□ -2.31
CBX3P9-201ENST00000402326 NBEAP1P0C6P0 100 aa0.64□□□□□ -2.31
CBX3P9-201ENST00000402326 CRYGSP22914 178 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms