RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 RNF141Q8WVD5 230 aa5.55□□□□□ -1.52
USP16-204ENST00000399976 ZNF503Q96F45 646 aa5.55□□□□□ -1.52
USP16-204ENST00000399976 C16orf92Q96LL3 132 aa5.55□□□□□ -1.52
USP16-204ENST00000399976 C11orf68Q9H3H3 251 aaKnown RBP5.55□□□□□ -1.52
USP16-204ENST00000399976 AAMDCQ9H7C9 122 aa5.55□□□□□ -1.52
USP16-204ENST00000399976 ZNF586Q9NXT0 402 aa5.55□□□□□ -1.52
USP16-204ENST00000399976 RFNGQ9Y644 331 aa5.55□□□□□ -1.52
USP16-204ENST00000399976 RBMY1BA6NDE4 496 aaKnown RBP5.55□□□□□ -1.52
USP16-204ENST00000399976 RBMY1EA6NEQ0 496 aaKnown RBP5.55□□□□□ -1.52
USP16-204ENST00000399976 NDUFB4O95168 129 aa5.55□□□□□ -1.52
USP16-204ENST00000399976 NBEAP1P0C6P0 100 aa5.55□□□□□ -1.52
USP16-204ENST00000399976 RBMY1DP0C7P1 496 aaKnown RBP5.55□□□□□ -1.52
USP16-204ENST00000399976 FRMD6-AS1P0C7T7 363 aa5.55□□□□□ -1.52
USP16-204ENST00000399976 TMEM256Q8N2U0 113 aa5.55□□□□□ -1.52
USP16-204ENST00000399976 SMIM3Q9BZL3 60 aa5.55□□□□□ -1.52
USP16-204ENST00000399976 TP53TG3Q9ULZ0 132 aa5.55□□□□□ -1.52
USP16-204ENST00000399976 TRRAPQ9Y4A5 3859 aa5.54□□□□□ -1.52
USP16-204ENST00000399976 HBE1P02100 147 aa5.54□□□□□ -1.52
USP16-204ENST00000399976 CRISP2P16562 243 aa5.54□□□□□ -1.52
USP16-204ENST00000399976 MORN5Q5VZ52 161 aa5.54□□□□□ -1.52
USP16-204ENST00000399976 EBLN2Q6P2I7 272 aa5.54□□□□□ -1.52
USP16-204ENST00000399976 ALKAL2Q6UX46 152 aa5.54□□□□□ -1.52
USP16-204ENST00000399976 MIR17HGQ75NE6 70 aa5.54□□□□□ -1.52
USP16-204ENST00000399976 COX8CQ7Z4L0 72 aa5.54□□□□□ -1.52
USP16-204ENST00000399976 SVBPQ8N300 66 aa5.54□□□□□ -1.52
USP16-204ENST00000399976 RNF183Q96D59 192 aa5.54□□□□□ -1.52
USP16-204ENST00000399976 LINC00477Q96M19 166 aa5.54□□□□□ -1.52
USP16-204ENST00000399976 UHRF2Q96PU4 802 aa5.54□□□□□ -1.52
USP16-204ENST00000399976 TMEM218A2RU14 115 aa5.54□□□□□ -1.52
USP16-204ENST00000399976 ZNF705EA8MWA4 302 aaPredicted RBP5.54□□□□□ -1.52
USP16-204ENST00000399976 S100A9P06702 114 aaKnown RBP5.54□□□□□ -1.52
USP16-204ENST00000399976 AMTNQ6UX39 209 aa5.54□□□□□ -1.52
USP16-204ENST00000399976 LYPD6BQ8NI32 183 aa5.54□□□□□ -1.52
USP16-204ENST00000399976 RAB24Q969Q5 203 aa5.54□□□□□ -1.52
USP16-204ENST00000399976 TUBA4BQ9H853 241 aa5.54□□□□□ -1.52
USP16-204ENST00000399976 WNK1Q9H4A3 2382 aa5.53□□□□□ -1.52
USP16-204ENST00000399976 TEX48A0A1B0GUV7 120 aa5.53□□□□□ -1.52
USP16-204ENST00000399976 H3BQ15 152 aa5.53□□□□□ -1.52
USP16-204ENST00000399976 GCHFRP30047 84 aa5.53□□□□□ -1.52
USP16-204ENST00000399976 DEFB131AP59861 70 aa5.53□□□□□ -1.52
USP16-204ENST00000399976 RAB2AP61019 212 aa5.53□□□□□ -1.52
USP16-204ENST00000399976 ATRAIDQ6UW56 229 aa5.53□□□□□ -1.52
USP16-204ENST00000399976 STHQ8IWL8 128 aa5.53□□□□□ -1.52
USP16-204ENST00000399976 HSD17B11Q8NBQ5 300 aa5.53□□□□□ -1.52
USP16-204ENST00000399976 CSTL1Q9H114 145 aa5.53□□□□□ -1.52
USP16-204ENST00000399976 SLC25A22Q9H936 323 aa5.53□□□□□ -1.52
USP16-204ENST00000399976 SORL1Q92673 2214 aa5.53□□□□□ -1.52
USP16-204ENST00000399976 IGHV3OR16-8A0A075B7F1 116 aa5.53□□□□□ -1.52
USP16-204ENST00000399976 HMGB3O15347 200 aaKnown RBP5.53□□□□□ -1.52
USP16-204ENST00000399976 SNAPINO95295 136 aa5.53□□□□□ -1.52
USP16-204ENST00000399976 TSPOP30536 169 aa5.53□□□□□ -1.52
USP16-204ENST00000399976 LEPP41159 167 aa5.53□□□□□ -1.52
USP16-204ENST00000399976 HAGHQ16775 308 aa5.53□□□□□ -1.52
USP16-204ENST00000399976 FAM24BQ8N5W8 94 aa5.53□□□□□ -1.52
USP16-204ENST00000399976 CSNK1G2-AS1Q8NCQ2 148 aa5.53□□□□□ -1.52
USP16-204ENST00000399976 OR8A1Q8NGG7 326 aa5.53□□□□□ -1.52
USP16-204ENST00000399976 ZNF471Q9BX82 626 aaPredicted RBP5.53□□□□□ -1.52
USP16-204ENST00000399976 SEC11CQ9BY50 192 aa5.53□□□□□ -1.52
USP16-204ENST00000399976 ZMAT4Q9H898 229 aa5.53□□□□□ -1.52
USP16-204ENST00000399976 MANBALQ9NQG1 85 aa5.53□□□□□ -1.52
USP16-204ENST00000399976 UBE2L3P68036 154 aaKnown RBP5.52□□□□□ -1.53
USP16-204ENST00000399976 PSMG4Q5JS54 123 aa5.52□□□□□ -1.53
USP16-204ENST00000399976 DEFB125Q8N687 156 aa5.52□□□□□ -1.53
USP16-204ENST00000399976 LINC00469Q8N7U9 141 aa5.52□□□□□ -1.53
USP16-204ENST00000399976 C5orf17Q8NAS9 161 aa5.52□□□□□ -1.53
USP16-204ENST00000399976 RPUSD4Q96CM3 377 aaKnown RBP5.52□□□□□ -1.53
USP16-204ENST00000399976 SMIM12Q96EX1 92 aa5.52□□□□□ -1.53
USP16-204ENST00000399976 SH3BGRL3Q9H299 93 aa5.52□□□□□ -1.53
USP16-204ENST00000399976 IGHV3-49A0A0A0MS15 119 aa5.52□□□□□ -1.53
USP16-204ENST00000399976 TMEM189A5PLL7 270 aa5.52□□□□□ -1.53
USP16-204ENST00000399976 RPL11P62913 178 aaKnown RBP5.52□□□□□ -1.53
USP16-204ENST00000399976 ZNF726P1Q15940 193 aa5.52□□□□□ -1.53
USP16-204ENST00000399976 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.52□□□□□ -1.53
USP16-204ENST00000399976 PCNPQ8WW12 178 aaKnown RBP5.52□□□□□ -1.53
USP16-204ENST00000399976 HIST1H2BAQ96A08 127 aa5.52□□□□□ -1.53
USP16-204ENST00000399976 C20orf173Q96LM9 149 aa5.52□□□□□ -1.53
USP16-204ENST00000399976 BIN3Q9NQY0 253 aa5.52□□□□□ -1.53
USP16-204ENST00000399976 IGHV3-66A0A0C4DH42 116 aa5.52□□□□□ -1.53
USP16-204ENST00000399976 APOC3P02656 99 aa5.52□□□□□ -1.53
USP16-204ENST00000399976 ZNF688P0C7X2 276 aa5.52□□□□□ -1.53
USP16-204ENST00000399976 CSN1S1P47710 185 aa5.52□□□□□ -1.53
USP16-204ENST00000399976 GCSAMLQ5JQS6 135 aa5.52□□□□□ -1.53
USP16-204ENST00000399976 ZNF705AQ6ZN79 300 aaPredicted RBP5.52□□□□□ -1.53
USP16-204ENST00000399976 TMEM75Q8N9X5 138 aa5.52□□□□□ -1.53
USP16-204ENST00000399976 OR10J6PQ8NGY7 276 aa5.52□□□□□ -1.53
USP16-204ENST00000399976 IL17DQ8TAD2 202 aa5.52□□□□□ -1.53
USP16-204ENST00000399976 FAM74A7A6NL05 159 aa5.51□□□□□ -1.53
USP16-204ENST00000399976 ZNF705FA8MVS1 300 aaPredicted RBP5.51□□□□□ -1.53
USP16-204ENST00000399976 F8W036 122 aa5.51□□□□□ -1.53
USP16-204ENST00000399976 ZNF705DP0CH99 300 aaPredicted RBP5.51□□□□□ -1.53
USP16-204ENST00000399976 ZNF705BP0CI00 300 aaPredicted RBP5.51□□□□□ -1.53
USP16-204ENST00000399976 ARL14EPLP0DKL9 152 aa5.51□□□□□ -1.53
USP16-204ENST00000399976 MIFP14174 115 aa5.51□□□□□ -1.53
USP16-204ENST00000399976 BLOC1S1P78537 153 aa5.51□□□□□ -1.53
USP16-204ENST00000399976 FAM74A3Q4VXF1 159 aa5.51□□□□□ -1.53
USP16-204ENST00000399976 IGF2BP2-AS1Q96M15 143 aa5.51□□□□□ -1.53
USP16-204ENST00000399976 NDUFAF3Q9BU61 184 aa5.51□□□□□ -1.53
USP16-204ENST00000399976 MEGF8Q7Z7M0 2845 aa5.51□□□□□ -1.53
USP16-204ENST00000399976 TRAV5A0A0B4J249 113 aa5.51□□□□□ -1.53
USP16-204ENST00000399976 MAP1LC3B2A6NCE7 125 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms