RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 FHL2Q14192 279 aa12.04□□□□□ -0.48
UFD1-202ENST00000399523 S100A7AQ86SG5 101 aa12.04□□□□□ -0.48
UFD1-202ENST00000399523 C8orf49Q96NF6 230 aa12.04□□□□□ -0.48
UFD1-202ENST00000399523 PRRT1Q99946 306 aa12.04□□□□□ -0.48
UFD1-202ENST00000399523 RNF24Q9Y225 148 aa12.04□□□□□ -0.48
UFD1-202ENST00000399523 KLF12Q9Y4X4 402 aa12.04□□□□□ -0.48
UFD1-202ENST00000399523 RNF213Q63HN8 5207 aa12.04□□□□□ -0.48
UFD1-202ENST00000399523 ANXA7P20073 488 aaKnown RBP12.03□□□□□ -0.48
UFD1-202ENST00000399523 TCL1AP56279 114 aa12.03□□□□□ -0.48
UFD1-202ENST00000399523 PATE2Q6UY27 113 aa12.03□□□□□ -0.48
UFD1-202ENST00000399523 OR51S1Q8NGJ8 323 aa12.03□□□□□ -0.48
UFD1-202ENST00000399523 K7EQD1 137 aa12.02□□□□□ -0.49
UFD1-202ENST00000399523 SLC25A6P12236 298 aa12.02□□□□□ -0.49
UFD1-202ENST00000399523 SELENOTP62341 195 aa12.02□□□□□ -0.49
UFD1-202ENST00000399523 LRTM2Q8N967 370 aa12.02□□□□□ -0.49
UFD1-202ENST00000399523 VGLL1Q99990 258 aa12.02□□□□□ -0.49
UFD1-202ENST00000399523 MRPL32Q9BYC8 188 aaKnown RBP12.02□□□□□ -0.49
UFD1-202ENST00000399523 PIGBOS1A0A0B4J2F0 54 aa12.01□□□□□ -0.49
UFD1-202ENST00000399523 DUXBA0A1W2PPF3 345 aa12.01□□□□□ -0.49
UFD1-202ENST00000399523 C7orf71A4D174 169 aa12.01□□□□□ -0.49
UFD1-202ENST00000399523 SLC17A3O00476 420 aa12.01□□□□□ -0.49
UFD1-202ENST00000399523 SYNGR2O43760 224 aa12.01□□□□□ -0.49
UFD1-202ENST00000399523 SLC25A5P05141 298 aaKnown RBP12.01□□□□□ -0.49
UFD1-202ENST00000399523 SNRPCP09234 159 aaKnown RBP12.01□□□□□ -0.49
UFD1-202ENST00000399523 AKAIN1P0CW23 69 aa12.01□□□□□ -0.49
UFD1-202ENST00000399523 ANXA3P12429 323 aa12.01□□□□□ -0.49
UFD1-202ENST00000399523 SRIP30626 198 aa12.01□□□□□ -0.49
UFD1-202ENST00000399523 VBP1P61758 197 aa12.01□□□□□ -0.49
UFD1-202ENST00000399523 SPANXN5Q5MJ07 72 aa12.01□□□□□ -0.49
UFD1-202ENST00000399523 EIF4E3Q8N5X7 224 aaKnown RBP12.01□□□□□ -0.49
UFD1-202ENST00000399523 WRBO00258 174 aa12□□□□□ -0.49
UFD1-202ENST00000399523 MRPS10P82664 201 aaKnown RBP12□□□□□ -0.49
UFD1-202ENST00000399523 SCGB3A2Q96PL1 93 aa12□□□□□ -0.49
UFD1-202ENST00000399523 ARL6Q9H0F7 186 aa12□□□□□ -0.49
UFD1-202ENST00000399523 ARV1Q9H2C2 271 aa12□□□□□ -0.49
UFD1-202ENST00000399523 RCL1Q9Y2P8 373 aaKnown RBP12□□□□□ -0.49
UFD1-202ENST00000399523 PXMP4Q9Y6I8 212 aa12□□□□□ -0.49
UFD1-202ENST00000399523 TRAV5A0A0B4J249 113 aa11.99□□□□□ -0.49
UFD1-202ENST00000399523 ZNF415Q09FC8 603 aa11.99□□□□□ -0.49
UFD1-202ENST00000399523 IBA57Q5T440 356 aaKnown RBP11.99□□□□□ -0.49
UFD1-202ENST00000399523 CLVS1Q8IUQ0 354 aaPredicted RBP11.99□□□□□ -0.49
UFD1-202ENST00000399523 AP3S1Q92572 193 aa11.99□□□□□ -0.49
UFD1-202ENST00000399523 MRPL16Q9NX20 251 aaKnown RBP11.99□□□□□ -0.49
UFD1-202ENST00000399523 STRAPQ9Y3F4 350 aaKnown RBP11.99□□□□□ -0.49
UFD1-202ENST00000399523 LRP2P98164 4655 aa11.98□□□□□ -0.49
UFD1-202ENST00000399523 SMCO3A2RU48 225 aa11.98□□□□□ -0.49
UFD1-202ENST00000399523 IBA57-AS1B1ANH7 110 aa11.98□□□□□ -0.49
UFD1-202ENST00000399523 KLLNB2CW77 178 aa11.98□□□□□ -0.49
UFD1-202ENST00000399523 E5RGE8 158 aa11.98□□□□□ -0.49
UFD1-202ENST00000399523 K7EPK0 472 aa11.98□□□□□ -0.49
UFD1-202ENST00000399523 BPIFA4PQ86YQ2 179 aa11.98□□□□□ -0.49
UFD1-202ENST00000399523 IQCF2Q8IXL9 164 aa11.98□□□□□ -0.49
UFD1-202ENST00000399523 SMIM4Q8WVI0 70 aa11.98□□□□□ -0.49
UFD1-202ENST00000399523 SAT2Q96F10 170 aaPredicted RBP11.98□□□□□ -0.49
UFD1-202ENST00000399523 H3BP45 60 aa11.97□□□□□ -0.49
UFD1-202ENST00000399523 H3BTX0 84 aa11.97□□□□□ -0.49
UFD1-202ENST00000399523 PXDC1Q5TGL8 231 aa11.97□□□□□ -0.49
UFD1-202ENST00000399523 LINC00305Q7Z4B0 112 aa11.97□□□□□ -0.49
UFD1-202ENST00000399523 FUNDC2Q9BWH2 189 aa11.97□□□□□ -0.49
UFD1-202ENST00000399523 SCP2D1Q9UJQ7 156 aa11.97□□□□□ -0.49
UFD1-202ENST00000399523 TRGV4A0A0C4DH28 118 aa11.96□□□□□ -0.49
UFD1-202ENST00000399523 IGHV3-38A0A0C4DH36 116 aa11.96□□□□□ -0.49
UFD1-202ENST00000399523 IGLC2P0DOY2 106 aa11.96□□□□□ -0.49
UFD1-202ENST00000399523 GYPEP15421 78 aa11.96□□□□□ -0.49
UFD1-202ENST00000399523 CD300CQ08708 224 aa11.96□□□□□ -0.49
UFD1-202ENST00000399523 LINC01556Q5JQF7 62 aa11.96□□□□□ -0.49
UFD1-202ENST00000399523 SCXQ7RTU7 201 aa11.96□□□□□ -0.49
UFD1-202ENST00000399523 FAM19A4Q96LR4 140 aa11.96□□□□□ -0.49
UFD1-202ENST00000399523 H3BQ15 152 aa11.95□□□□□ -0.5
UFD1-202ENST00000399523 MPDU1O75352 247 aa11.95□□□□□ -0.5
UFD1-202ENST00000399523 ORM1P02763 201 aa11.95□□□□□ -0.5
UFD1-202ENST00000399523 BTN1A1Q13410 526 aa11.95□□□□□ -0.5
UFD1-202ENST00000399523 PCNPQ8WW12 178 aaKnown RBP11.95□□□□□ -0.5
UFD1-202ENST00000399523 TXNDC17Q9BRA2 123 aa11.95□□□□□ -0.5
UFD1-202ENST00000399523 VCX3AQ9NNX9 186 aa11.95□□□□□ -0.5
UFD1-202ENST00000399523 TP53TG3Q9ULZ0 132 aa11.95□□□□□ -0.5
UFD1-202ENST00000399523 PKHD1L1Q86WI1 4243 aa11.95□□□□□ -0.5
UFD1-202ENST00000399523 MIXL1Q9H2W2 232 aa11.94□□□□□ -0.5
UFD1-202ENST00000399523 RABL2BQ9UNT1 228 aa11.94□□□□□ -0.5
UFD1-202ENST00000399523 ANKRD20A5PA0PJZ0 165 aa11.93□□□□□ -0.5
UFD1-202ENST00000399523 RNASE4P34096 147 aaKnown RBP11.93□□□□□ -0.5
UFD1-202ENST00000399523 TIRAPP58753 221 aa11.93□□□□□ -0.5
UFD1-202ENST00000399523 WFDC2Q14508 124 aa11.93□□□□□ -0.5
UFD1-202ENST00000399523 MORN5Q5VZ52 161 aa11.93□□□□□ -0.5
UFD1-202ENST00000399523 Q9HAA7 133 aa11.93□□□□□ -0.5
UFD1-202ENST00000399523 NPVFQ9HCQ7 196 aa11.93□□□□□ -0.5
UFD1-202ENST00000399523 FNDC10F2Z333 226 aa11.92□□□□□ -0.5
UFD1-202ENST00000399523 CTDSPLO15194 276 aa11.92□□□□□ -0.5
UFD1-202ENST00000399523 SFTA3P0C7M3 94 aa11.92□□□□□ -0.5
UFD1-202ENST00000399523 SLC38A11Q08AI6 406 aa11.92□□□□□ -0.5
UFD1-202ENST00000399523 ERCC8Q13216 396 aa11.92□□□□□ -0.5
UFD1-202ENST00000399523 OPCMLQ14982 345 aa11.92□□□□□ -0.5
UFD1-202ENST00000399523 GUK1Q16774 197 aa11.92□□□□□ -0.5
UFD1-202ENST00000399523 TMEM128Q5BJH2 165 aa11.92□□□□□ -0.5
UFD1-202ENST00000399523 TMEM37Q8WXS4 190 aa11.92□□□□□ -0.5
UFD1-202ENST00000399523 ZNF479Q96JC4 524 aa11.92□□□□□ -0.5
UFD1-202ENST00000399523 A0A087WXM4 84 aa11.91□□□□□ -0.5
UFD1-202ENST00000399523 RGS13O14921 159 aa11.91□□□□□ -0.5
UFD1-202ENST00000399523 NMBP08949 121 aa11.91□□□□□ -0.5
UFD1-202ENST00000399523 OR4E1P0C645 316 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms