RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 IFITM10A6NMD0 228 aa4.82□□□□□ -1.64
TRAPPC13-202ENST00000399438 IGKV3-15P01624 115 aa4.82□□□□□ -1.64
TRAPPC13-202ENST00000399438 IGKV1-16P04430 117 aa4.82□□□□□ -1.64
TRAPPC13-202ENST00000399438 BCL2P10415 239 aa4.82□□□□□ -1.64
TRAPPC13-202ENST00000399438 SLC25A6P12236 298 aa4.82□□□□□ -1.64
TRAPPC13-202ENST00000399438 ELOBQ15370 118 aa4.82□□□□□ -1.64
TRAPPC13-202ENST00000399438 ECSCRQ19T08 205 aa4.82□□□□□ -1.64
TRAPPC13-202ENST00000399438 ZNF645Q8N7E2 425 aa4.82□□□□□ -1.64
TRAPPC13-202ENST00000399438 ZNF491Q8N8L2 437 aa4.82□□□□□ -1.64
TRAPPC13-202ENST00000399438 OR10D4PQ8NGN7 298 aa4.82□□□□□ -1.64
TRAPPC13-202ENST00000399438 H1FXQ92522 213 aaKnown RBP4.82□□□□□ -1.64
TRAPPC13-202ENST00000399438 CCL17Q92583 94 aa4.82□□□□□ -1.64
TRAPPC13-202ENST00000399438 GNPNAT1Q96EK6 184 aaPredicted RBP4.82□□□□□ -1.64
TRAPPC13-202ENST00000399438 CARD19Q96LW7 228 aa4.82□□□□□ -1.64
TRAPPC13-202ENST00000399438 GAGE12JA6NER3 117 aa4.82□□□□□ -1.64
TRAPPC13-202ENST00000399438 GAGE7O76087 117 aa4.82□□□□□ -1.64
TRAPPC13-202ENST00000399438 GAGE12FP0CL80 117 aa4.82□□□□□ -1.64
TRAPPC13-202ENST00000399438 GAGE12GP0CL81 117 aa4.82□□□□□ -1.64
TRAPPC13-202ENST00000399438 GAGE12IP0CL82 117 aa4.82□□□□□ -1.64
TRAPPC13-202ENST00000399438 GPR6P46095 362 aaPredicted RBP4.82□□□□□ -1.64
TRAPPC13-202ENST00000399438 GAGE4Q13068 117 aa4.82□□□□□ -1.64
TRAPPC13-202ENST00000399438 HRCT1Q6UXD1 115 aa4.82□□□□□ -1.64
TRAPPC13-202ENST00000399438 ZNF114Q8NC26 417 aa4.82□□□□□ -1.64
TRAPPC13-202ENST00000399438 FRZBQ92765 325 aa4.82□□□□□ -1.64
TRAPPC13-202ENST00000399438 TUBA4BQ9H853 241 aa4.82□□□□□ -1.64
TRAPPC13-202ENST00000399438 CELSR2Q9HCU4 2923 aa4.81□□□□□ -1.64
TRAPPC13-202ENST00000399438 SOD3P08294 240 aa4.81□□□□□ -1.64
TRAPPC13-202ENST00000399438 FRMD6-AS1P0C7T7 363 aa4.81□□□□□ -1.64
TRAPPC13-202ENST00000399438 FOLR2P14207 255 aa4.81□□□□□ -1.64
TRAPPC13-202ENST00000399438 FABP4P15090 132 aa4.81□□□□□ -1.64
TRAPPC13-202ENST00000399438 LMO4P61968 165 aa4.81□□□□□ -1.64
TRAPPC13-202ENST00000399438 CACNG7P62955 275 aa4.81□□□□□ -1.64
TRAPPC13-202ENST00000399438 RHOGP84095 191 aa4.81□□□□□ -1.64
TRAPPC13-202ENST00000399438 JOSD1Q15040 202 aaPredicted RBP4.81□□□□□ -1.64
TRAPPC13-202ENST00000399438 PYY3Q5JQD4 70 aa4.81□□□□□ -1.64
TRAPPC13-202ENST00000399438 TCTEX1D1Q8N7M0 179 aa4.81□□□□□ -1.64
TRAPPC13-202ENST00000399438 OR10P1Q8NGE3 313 aa4.81□□□□□ -1.64
TRAPPC13-202ENST00000399438 TVP23CQ96ET8 276 aa4.81□□□□□ -1.64
TRAPPC13-202ENST00000399438 PSMG3Q9BT73 122 aaPredicted RBP4.81□□□□□ -1.64
TRAPPC13-202ENST00000399438 M0R2Z0 102 aa4.81□□□□□ -1.64
TRAPPC13-202ENST00000399438 Q5XG85 94 aa4.81□□□□□ -1.64
TRAPPC13-202ENST00000399438 PPP1R27Q86WC6 154 aa4.81□□□□□ -1.64
TRAPPC13-202ENST00000399438 HES4Q9HCC6 221 aa4.81□□□□□ -1.64
TRAPPC13-202ENST00000399438 SLC25A15Q9Y619 301 aa4.81□□□□□ -1.64
TRAPPC13-202ENST00000399438 CFAP46Q8IYW2 2715 aa4.81□□□□□ -1.64
TRAPPC13-202ENST00000399438 LRRK2Q5S007 2527 aa4.81□□□□□ -1.64
TRAPPC13-202ENST00000399438 ITPR1Q14643 2758 aa4.8□□□□□ -1.64
TRAPPC13-202ENST00000399438 PKD1L2Q7Z442 2459 aa4.8□□□□□ -1.64
TRAPPC13-202ENST00000399438 IGLV9-49A0A0B4J1Y8 123 aa4.8□□□□□ -1.64
TRAPPC13-202ENST00000399438 HIST1H2BKO60814 126 aa4.8□□□□□ -1.64
TRAPPC13-202ENST00000399438 HIST1H2BJP06899 126 aa4.8□□□□□ -1.64
TRAPPC13-202ENST00000399438 SAA2P0DJI9 122 aaPredicted RBP4.8□□□□□ -1.64
TRAPPC13-202ENST00000399438 HIST1H2BOP23527 126 aa4.8□□□□□ -1.64
TRAPPC13-202ENST00000399438 NPPCP23582 126 aa4.8□□□□□ -1.64
TRAPPC13-202ENST00000399438 HIST1H2BBP33778 126 aa4.8□□□□□ -1.64
TRAPPC13-202ENST00000399438 RAB5CP51148 216 aa4.8□□□□□ -1.64
TRAPPC13-202ENST00000399438 HIST1H2BDP58876 126 aa4.8□□□□□ -1.64
TRAPPC13-202ENST00000399438 HIST1H2BCP62807 126 aa4.8□□□□□ -1.64
TRAPPC13-202ENST00000399438 CATR1Q13166 79 aa4.8□□□□□ -1.64
TRAPPC13-202ENST00000399438 HIST2H2BEQ16778 126 aa4.8□□□□□ -1.64
TRAPPC13-202ENST00000399438 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.8□□□□□ -1.64
TRAPPC13-202ENST00000399438 HEPN1Q6WQI6 88 aa4.8□□□□□ -1.64
TRAPPC13-202ENST00000399438 Q6ZS49 121 aa4.8□□□□□ -1.64
TRAPPC13-202ENST00000399438 TCF23Q7RTU1 214 aa4.8□□□□□ -1.64
TRAPPC13-202ENST00000399438 ZNF709Q8N972 641 aa4.8□□□□□ -1.64
TRAPPC13-202ENST00000399438 HIST1H2BHQ93079 126 aa4.8□□□□□ -1.64
TRAPPC13-202ENST00000399438 HIST1H2BNQ99877 126 aa4.8□□□□□ -1.64
TRAPPC13-202ENST00000399438 HIST1H2BMQ99879 126 aa4.8□□□□□ -1.64
TRAPPC13-202ENST00000399438 NPCDR1Q9BY65 106 aa4.8□□□□□ -1.64
TRAPPC13-202ENST00000399438 IFI27L2Q9H2X8 130 aa4.8□□□□□ -1.64
TRAPPC13-202ENST00000399438 NOTCH3Q9UM47 2321 aa4.8□□□□□ -1.64
TRAPPC13-202ENST00000399438 DOPEY2Q9Y3R5 2298 aa4.8□□□□□ -1.64
TRAPPC13-202ENST00000399438 OR4A8P0C604 315 aa4.8□□□□□ -1.64
TRAPPC13-202ENST00000399438 TRGC1P0CF51 173 aa4.8□□□□□ -1.64
TRAPPC13-202ENST00000399438 LINC00242Q5T6M2 205 aa4.8□□□□□ -1.64
TRAPPC13-202ENST00000399438 RBMXL3Q8N7X1 1067 aaKnown RBP4.8□□□□□ -1.64
TRAPPC13-202ENST00000399438 HSD17B10Q99714 261 aaKnown RBP4.8□□□□□ -1.64
TRAPPC13-202ENST00000399438 PARLQ9H300 379 aa4.8□□□□□ -1.64
TRAPPC13-202ENST00000399438 CALYQ9NYX4 217 aa4.8□□□□□ -1.64
TRAPPC13-202ENST00000399438 ABCA12Q86UK0 2595 aa4.8□□□□□ -1.64
TRAPPC13-202ENST00000399438 RPL24P83731 157 aaKnown RBP4.8□□□□□ -1.64
TRAPPC13-202ENST00000399438 COL5A1-AS1Q5SY13 56 aa4.8□□□□□ -1.64
TRAPPC13-202ENST00000399438 IGFL3Q6UXB1 125 aa4.8□□□□□ -1.64
TRAPPC13-202ENST00000399438 Q8IYB0 196 aa4.8□□□□□ -1.64
TRAPPC13-202ENST00000399438 DYSFO75923 2080 aa4.79□□□□□ -1.64
TRAPPC13-202ENST00000399438 PLAC8L1A1L4L8 177 aa4.79□□□□□ -1.64
TRAPPC13-202ENST00000399438 RBMY1BA6NDE4 496 aaKnown RBP4.79□□□□□ -1.64
TRAPPC13-202ENST00000399438 RBMY1EA6NEQ0 496 aaKnown RBP4.79□□□□□ -1.64
TRAPPC13-202ENST00000399438 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.79□□□□□ -1.64
TRAPPC13-202ENST00000399438 CGAP01215 116 aa4.79□□□□□ -1.64
TRAPPC13-202ENST00000399438 IGHV1-46P01743 117 aa4.79□□□□□ -1.64
TRAPPC13-202ENST00000399438 RBMY1DP0C7P1 496 aaKnown RBP4.79□□□□□ -1.64
TRAPPC13-202ENST00000399438 RBMY1A1P0DJD3 496 aaKnown RBP4.79□□□□□ -1.64
TRAPPC13-202ENST00000399438 ARL14EPLP0DKL9 152 aa4.79□□□□□ -1.64
TRAPPC13-202ENST00000399438 SMIM17P0DL12 118 aa4.79□□□□□ -1.64
TRAPPC13-202ENST00000399438 CD24P25063 80 aa4.79□□□□□ -1.64
TRAPPC13-202ENST00000399438 RHEBQ15382 184 aa4.79□□□□□ -1.64
TRAPPC13-202ENST00000399438 MSMO1Q15800 293 aa4.79□□□□□ -1.64
TRAPPC13-202ENST00000399438 TTC32Q5I0X7 151 aa4.79□□□□□ -1.64
TRAPPC13-202ENST00000399438 LYPD2Q6UXB3 125 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms