RNA–Protein interactions for RNA: ENST00000399275.6

SMAD9-203, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMAD9, Length 5,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-203ENST00000399275 TIMM17BO60830 172 aa7.8□□□□□ -1.16
SMAD9-203ENST00000399275 DEFB109BQ30KR1 87 aa7.8□□□□□ -1.16
SMAD9-203ENST00000399275 PRCDQ00LT1 54 aa7.8□□□□□ -1.16
SMAD9-203ENST00000399275 ZFP2Q6ZN57 461 aa7.8□□□□□ -1.16
SMAD9-203ENST00000399275 ZIC4Q8N9L1 334 aa7.8□□□□□ -1.16
SMAD9-203ENST00000399275 MP68P56378 58 aa7.79□□□□□ -1.16
SMAD9-203ENST00000399275 SMRP1Q8NCR6 262 aa7.79□□□□□ -1.16
SMAD9-203ENST00000399275 LEAP2Q969E1 77 aa7.79□□□□□ -1.16
SMAD9-203ENST00000399275 SCRT2Q9NQ03 307 aa7.79□□□□□ -1.16
SMAD9-203ENST00000399275 SVILO95425 2214 aa7.79□□□□□ -1.16
SMAD9-203ENST00000399275 TRBV25-1A0A075B6N4 114 aa7.79□□□□□ -1.16
SMAD9-203ENST00000399275 SAA2-SAA4A0A096LPE2 208 aa7.79□□□□□ -1.16
SMAD9-203ENST00000399275 ELANEP08246 267 aa7.79□□□□□ -1.16
SMAD9-203ENST00000399275 ZNF876PQ49A33 203 aa7.79□□□□□ -1.16
SMAD9-203ENST00000399275 PRR30Q53SZ7 412 aaPredicted RBP7.79□□□□□ -1.16
SMAD9-203ENST00000399275 SCN2AQ99250 2005 aa7.79□□□□□ -1.16
SMAD9-203ENST00000399275 CD69Q07108 199 aa7.79□□□□□ -1.16
SMAD9-203ENST00000399275 SSC4DQ8WTU2 575 aa7.79□□□□□ -1.16
SMAD9-203ENST00000399275 FNDC1Q4ZHG4 1894 aaPredicted RBP7.79□□□□□ -1.16
SMAD9-203ENST00000399275 PLXNA4Q9HCM2 1894 aa7.79□□□□□ -1.16
SMAD9-203ENST00000399275 TRPM7Q96QT4 1865 aa7.79□□□□□ -1.16
SMAD9-203ENST00000399275 C5orf63A6NC05 138 aa7.79□□□□□ -1.16
SMAD9-203ENST00000399275 SPACA3Q8IXA5 215 aa7.79□□□□□ -1.16
SMAD9-203ENST00000399275 VWCEQ96DN2 955 aa7.79□□□□□ -1.16
SMAD9-203ENST00000399275 EP400Q96L91 3159 aa7.79□□□□□ -1.16
SMAD9-203ENST00000399275 LYRM9A8MSI8 78 aa7.79□□□□□ -1.16
SMAD9-203ENST00000399275 PMAIP1Q13794 54 aa7.79□□□□□ -1.16
SMAD9-203ENST00000399275 Q6ZRM9 215 aa7.79□□□□□ -1.16
SMAD9-203ENST00000399275 SLC50A1Q9BRV3 221 aa7.79□□□□□ -1.16
SMAD9-203ENST00000399275 LIME1Q9H400 295 aa7.79□□□□□ -1.16
SMAD9-203ENST00000399275 DPH3P1Q9H4G8 78 aa7.79□□□□□ -1.16
SMAD9-203ENST00000399275 F8VRH5 84 aa7.78□□□□□ -1.16
SMAD9-203ENST00000399275 CHKB-CPT1BH3BT56 60 aa7.78□□□□□ -1.16
SMAD9-203ENST00000399275 M0R1W7 72 aa7.78□□□□□ -1.16
SMAD9-203ENST00000399275 PFN2P35080 140 aa7.78□□□□□ -1.16
SMAD9-203ENST00000399275 TRPT1Q86TN4 253 aaKnown RBP7.78□□□□□ -1.16
SMAD9-203ENST00000399275 TNRC6AQ8NDV7 1962 aaKnown RBP7.78□□□□□ -1.16
SMAD9-203ENST00000399275 K7EN84 100 aa7.78□□□□□ -1.16
SMAD9-203ENST00000399275 FXYD2P54710 66 aa7.78□□□□□ -1.16
SMAD9-203ENST00000399275 CCL8P80075 99 aa7.78□□□□□ -1.16
SMAD9-203ENST00000399275 IMMP1LQ96LU5 166 aa7.78□□□□□ -1.16
SMAD9-203ENST00000399275 RFPL3SP0C7P2 107 aa7.78□□□□□ -1.16
SMAD9-203ENST00000399275 ARMS2P0C7Q2 107 aa7.78□□□□□ -1.16
SMAD9-203ENST00000399275 CSDC2Q9Y534 153 aaKnown RBP7.78□□□□□ -1.16
SMAD9-203ENST00000399275 TP53BP1Q12888 1972 aaPredicted RBP7.78□□□□□ -1.16
SMAD9-203ENST00000399275 KIF26BQ2KJY2 2108 aa7.78□□□□□ -1.16
SMAD9-203ENST00000399275 F5P12259 2224 aa7.78□□□□□ -1.16
SMAD9-203ENST00000399275 TRBV12-3P01733 135 aa7.78□□□□□ -1.16
SMAD9-203ENST00000399275 CECR9P0C854 216 aa7.78□□□□□ -1.16
SMAD9-203ENST00000399275 SLC25A29Q8N8R3 303 aa7.78□□□□□ -1.16
SMAD9-203ENST00000399275 IGHV3-66A0A0C4DH42 116 aa7.77□□□□□ -1.17
SMAD9-203ENST00000399275 C15orf62A8K5M9 175 aa7.77□□□□□ -1.17
SMAD9-203ENST00000399275 C6orf226Q5I0X4 101 aa7.77□□□□□ -1.17
SMAD9-203ENST00000399275 DEFB104AQ8WTQ1 72 aa7.77□□□□□ -1.17
SMAD9-203ENST00000399275 IGFBPL1Q8WX77 278 aa7.77□□□□□ -1.17
SMAD9-203ENST00000399275 DKK2Q9UBU2 259 aa7.77□□□□□ -1.17
SMAD9-203ENST00000399275 PLXNA2O75051 1894 aa7.77□□□□□ -1.17
SMAD9-203ENST00000399275 VWA8A3KMH1 1905 aa7.77□□□□□ -1.17
SMAD9-203ENST00000399275 TRAV13-2A0A0B4J235 113 aa7.77□□□□□ -1.17
SMAD9-203ENST00000399275 RPL15P61313 204 aaKnown RBP7.77□□□□□ -1.17
SMAD9-203ENST00000399275 MRPL14Q6P1L8 145 aaKnown RBP7.77□□□□□ -1.17
SMAD9-203ENST00000399275 C2orf66Q6UXQ4 117 aa7.77□□□□□ -1.17
SMAD9-203ENST00000399275 ZNF581Q9P0T4 197 aa7.77□□□□□ -1.17
SMAD9-203ENST00000399275 Q8N8P6 123 aa7.77□□□□□ -1.17
SMAD9-203ENST00000399275 PRR7Q8TB68 274 aa7.77□□□□□ -1.17
SMAD9-203ENST00000399275 ZNF747Q9BV97 191 aa7.77□□□□□ -1.17
SMAD9-203ENST00000399275 IGHV3-49A0A0A0MS15 119 aa7.77□□□□□ -1.17
SMAD9-203ENST00000399275 PSG7Q13046 419 aa7.77□□□□□ -1.17
SMAD9-203ENST00000399275 ARRDC1-AS1Q9H2J1 176 aa7.77□□□□□ -1.17
SMAD9-203ENST00000399275 PLA2G2EQ9NZK7 142 aa7.77□□□□□ -1.17
SMAD9-203ENST00000399275 TRBV10-2A0A0K0K1G8 114 aa7.76□□□□□ -1.17
SMAD9-203ENST00000399275 SAA2P0DJI9 122 aaPredicted RBP7.76□□□□□ -1.17
SMAD9-203ENST00000399275 LTBRP36941 435 aa7.76□□□□□ -1.17
SMAD9-203ENST00000399275 ZNF493Q6ZR52 646 aa7.76□□□□□ -1.17
SMAD9-203ENST00000399275 Q6ZT83 130 aa7.76□□□□□ -1.17
SMAD9-203ENST00000399275 IGHV1OR15-1A0A075B7D0 117 aa7.76□□□□□ -1.17
SMAD9-203ENST00000399275 DUSP14O95147 198 aaKnown RBP7.76□□□□□ -1.17
SMAD9-203ENST00000399275 IGLC6P0CF74 106 aa7.76□□□□□ -1.17
SMAD9-203ENST00000399275 ZNRF1Q8ND25 227 aa7.76□□□□□ -1.17
SMAD9-203ENST00000399275 FGFBP3Q8TAT2 258 aa7.76□□□□□ -1.17
SMAD9-203ENST00000399275 TMEM141Q96I45 108 aa7.76□□□□□ -1.17
SMAD9-203ENST00000399275 J3QQQ9 107 aa7.76□□□□□ -1.17
SMAD9-203ENST00000399275 ETV2O00321 342 aaPredicted RBP7.76□□□□□ -1.17
SMAD9-203ENST00000399275 NTF4P34130 210 aa7.76□□□□□ -1.17
SMAD9-203ENST00000399275 SAP25Q8TEE9 199 aa7.76□□□□□ -1.17
SMAD9-203ENST00000399275 NDUFA12Q9UI09 145 aa7.76□□□□□ -1.17
SMAD9-203ENST00000399275 V9GYV3 84 aa7.76□□□□□ -1.17
SMAD9-203ENST00000399275 SMIM26A0A096LP01 95 aa7.76□□□□□ -1.17
SMAD9-203ENST00000399275 H3BT86 120 aa7.76□□□□□ -1.17
SMAD9-203ENST00000399275 SH2D1AO60880 128 aa7.76□□□□□ -1.17
SMAD9-203ENST00000399275 NDPQ00604 133 aa7.76□□□□□ -1.17
SMAD9-203ENST00000399275 LOXL1Q08397 574 aaPredicted RBP7.76□□□□□ -1.17
SMAD9-203ENST00000399275 FAM19A5Q7Z5A7 132 aaPredicted RBP7.76□□□□□ -1.17
SMAD9-203ENST00000399275 ORMDL1Q9P0S3 153 aa7.76□□□□□ -1.17
SMAD9-203ENST00000399275 SRCAPQ6ZRS2 3230 aa7.76□□□□□ -1.17
SMAD9-203ENST00000399275 CD24P25063 80 aa7.75□□□□□ -1.17
SMAD9-203ENST00000399275 NTN3O00634 580 aaPredicted RBP7.75□□□□□ -1.17
SMAD9-203ENST00000399275 NDUFS7O75251 213 aa7.75□□□□□ -1.17
SMAD9-203ENST00000399275 Q6P435 159 aa7.75□□□□□ -1.17
SMAD9-203ENST00000399275 C8orf46Q8TAG6 207 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms