RNA–Protein interactions for RNA: ENST00000398519.9

CSNK1D-204, Transcript of casein kinase 1 delta, humanhuman

TSL 5 BASIC

Gene CSNK1D, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-204ENST00000398519 TGP01266 2768 aa12.75□□□□□ -0.37
CSNK1D-204ENST00000398519 PRAC2D3DTV9 90 aa12.74□□□□□ -0.37
CSNK1D-204ENST00000398519 M0R3E3 92 aa12.74□□□□□ -0.37
CSNK1D-204ENST00000398519 ZNF705DP0CH99 300 aaPredicted RBP12.74□□□□□ -0.37
CSNK1D-204ENST00000398519 ZNF705BP0CI00 300 aaPredicted RBP12.74□□□□□ -0.37
CSNK1D-204ENST00000398519 RANP62826 216 aaKnown RBP12.74□□□□□ -0.37
CSNK1D-204ENST00000398519 ICAM4Q14773 271 aa12.74□□□□□ -0.37
CSNK1D-204ENST00000398519 EIF5AL1Q6IS14 154 aaKnown RBP12.74□□□□□ -0.37
CSNK1D-204ENST00000398519 SUN5Q8TC36 379 aa12.74□□□□□ -0.37
CSNK1D-204ENST00000398519 TM2D3Q9BRN9 247 aa12.74□□□□□ -0.37
CSNK1D-204ENST00000398519 CSTL1Q9H114 145 aa12.74□□□□□ -0.37
CSNK1D-204ENST00000398519 NBEAL2Q6ZNJ1 2754 aa12.74□□□□□ -0.37
CSNK1D-204ENST00000398519 IGKV3-20P01619 116 aa12.73□□□□□ -0.37
CSNK1D-204ENST00000398519 FGF8P55075 233 aaPredicted RBP12.73□□□□□ -0.37
CSNK1D-204ENST00000398519 OR4B1Q8NGF8 309 aa12.73□□□□□ -0.37
CSNK1D-204ENST00000398519 OR8A1Q8NGG7 326 aa12.73□□□□□ -0.37
CSNK1D-204ENST00000398519 FAM213BQ8TBF2 198 aa12.73□□□□□ -0.37
CSNK1D-204ENST00000398519 MRPL53Q96EL3 112 aaKnown RBP12.73□□□□□ -0.37
CSNK1D-204ENST00000398519 Q9H3A6 140 aa12.73□□□□□ -0.37
CSNK1D-204ENST00000398519 AAMDCQ9H7C9 122 aa12.73□□□□□ -0.37
CSNK1D-204ENST00000398519 HUWE1Q7Z6Z7 4374 aaKnown RBP12.73□□□□□ -0.37
CSNK1D-204ENST00000398519 MAP1LC3B2A6NCE7 125 aa12.73□□□□□ -0.37
CSNK1D-204ENST00000398519 BOLA2-SMG1P6H3BVE0 249 aa12.73□□□□□ -0.37
CSNK1D-204ENST00000398519 CNN1P51911 297 aaKnown RBP12.73□□□□□ -0.37
CSNK1D-204ENST00000398519 DPPA3Q6W0C5 159 aa12.73□□□□□ -0.37
CSNK1D-204ENST00000398519 LYPD1Q8N2G4 141 aa12.73□□□□□ -0.37
CSNK1D-204ENST00000398519 CLUHP3Q96NS8 147 aa12.73□□□□□ -0.37
CSNK1D-204ENST00000398519 MAP1LC3BQ9GZQ8 125 aa12.73□□□□□ -0.37
CSNK1D-204ENST00000398519 PRELID1Q9Y255 219 aa12.73□□□□□ -0.37
CSNK1D-204ENST00000398519 A8MTW9 85 aa12.72□□□□□ -0.37
CSNK1D-204ENST00000398519 CA1P00915 261 aaPredicted RBP12.72□□□□□ -0.37
CSNK1D-204ENST00000398519 GIG44P09565 113 aaPredicted RBP12.72□□□□□ -0.37
CSNK1D-204ENST00000398519 NHLRC4P0CG21 123 aaPredicted RBP12.72□□□□□ -0.37
CSNK1D-204ENST00000398519 HIST1H1AQ02539 215 aaPredicted RBP12.72□□□□□ -0.37
CSNK1D-204ENST00000398519 MORN3Q6PF18 240 aaPredicted RBP12.72□□□□□ -0.37
CSNK1D-204ENST00000398519 TMEM167BQ9NRX6 74 aa12.72□□□□□ -0.37
CSNK1D-204ENST00000398519 UBE2CO00762 179 aa12.71□□□□□ -0.37
CSNK1D-204ENST00000398519 DUSP14O95147 198 aaKnown RBP12.71□□□□□ -0.37
CSNK1D-204ENST00000398519 IQCF2Q8IXL9 164 aa12.71□□□□□ -0.37
CSNK1D-204ENST00000398519 TMPRSS5Q9H3S3 457 aa12.71□□□□□ -0.37
CSNK1D-204ENST00000398519 RETNQ9HD89 108 aa12.71□□□□□ -0.37
CSNK1D-204ENST00000398519 TENM3Q9P273 2699 aa12.71□□□□□ -0.38
CSNK1D-204ENST00000398519 SULT1A2P50226 295 aa12.7□□□□□ -0.38
CSNK1D-204ENST00000398519 RAB5CP51148 216 aa12.7□□□□□ -0.38
CSNK1D-204ENST00000398519 DEFB135Q30KP9 77 aa12.7□□□□□ -0.38
CSNK1D-204ENST00000398519 AMTNQ6UX39 209 aa12.7□□□□□ -0.38
CSNK1D-204ENST00000398519 MBD3L1Q8WWY6 194 aa12.7□□□□□ -0.38
CSNK1D-204ENST00000398519 SPATA25Q9BR10 227 aa12.7□□□□□ -0.38
CSNK1D-204ENST00000398519 OTORQ9NRC9 128 aa12.7□□□□□ -0.38
CSNK1D-204ENST00000398519 NUTF2P61970 127 aaKnown RBP12.69□□□□□ -0.38
CSNK1D-204ENST00000398519 FAM74A1Q5RGS3 127 aa12.69□□□□□ -0.38
CSNK1D-204ENST00000398519 Q6ZWC4 215 aa12.69□□□□□ -0.38
CSNK1D-204ENST00000398519 OR10J6PQ8NGY7 276 aa12.69□□□□□ -0.38
CSNK1D-204ENST00000398519 SFT2D1Q8WV19 159 aa12.69□□□□□ -0.38
CSNK1D-204ENST00000398519 SLC35B3Q9H1N7 401 aa12.69□□□□□ -0.38
CSNK1D-204ENST00000398519 ZMAT4Q9H898 229 aa12.69□□□□□ -0.38
CSNK1D-204ENST00000398519 PGPA6NDG6 321 aa12.68□□□□□ -0.38
CSNK1D-204ENST00000398519 H2AFB1P0C5Y9 115 aa12.68□□□□□ -0.38
CSNK1D-204ENST00000398519 FXYD7P58549 80 aa12.68□□□□□ -0.38
CSNK1D-204ENST00000398519 ALKAL2Q6UX46 152 aa12.68□□□□□ -0.38
CSNK1D-204ENST00000398519 OVOL2Q9BRP0 275 aa12.68□□□□□ -0.38
CSNK1D-204ENST00000398519 IGKV2-40A0A087WW87 121 aaPredicted RBP12.67□□□□□ -0.38
CSNK1D-204ENST00000398519 A0A1B0GV50 99 aa12.67□□□□□ -0.38
CSNK1D-204ENST00000398519 GGTLC3B5MD39 225 aa12.67□□□□□ -0.38
CSNK1D-204ENST00000398519 NPIPB6E9PJ23 425 aa12.67□□□□□ -0.38
CSNK1D-204ENST00000398519 IGKV2D-40P01614 121 aaPredicted RBP12.67□□□□□ -0.38
CSNK1D-204ENST00000398519 RNF183Q96D59 192 aa12.67□□□□□ -0.38
CSNK1D-204ENST00000398519 XCL2Q9UBD3 114 aa12.67□□□□□ -0.38
CSNK1D-204ENST00000398519 CSN1S1P47710 185 aa12.66□□□□□ -0.38
CSNK1D-204ENST00000398519 UBE2G2P60604 165 aa12.66□□□□□ -0.38
CSNK1D-204ENST00000398519 ERCC8Q13216 396 aa12.66□□□□□ -0.38
CSNK1D-204ENST00000398519 CSNK1G2-AS1Q8NCQ2 148 aa12.66□□□□□ -0.38
CSNK1D-204ENST00000398519 RCHY1Q96PM5 261 aa12.66□□□□□ -0.38
CSNK1D-204ENST00000398519 TP53TG1Q9Y2A0 90 aa12.66□□□□□ -0.38
CSNK1D-204ENST00000398519 YTHDF2Q9Y5A9 579 aaKnown RBP12.66□□□□□ -0.38
CSNK1D-204ENST00000398519 A0A1W2PRE2 83 aa12.65□□□□□ -0.38
CSNK1D-204ENST00000398519 DIRC3C9JPN6 131 aa12.65□□□□□ -0.38
CSNK1D-204ENST00000398519 SPRY2O43597 315 aa12.65□□□□□ -0.38
CSNK1D-204ENST00000398519 SPINK13Q1W4C9 94 aa12.65□□□□□ -0.38
CSNK1D-204ENST00000398519 CMTM2Q8TAZ6 248 aa12.65□□□□□ -0.38
CSNK1D-204ENST00000398519 RXFP4Q8TDU9 374 aa12.65□□□□□ -0.38
CSNK1D-204ENST00000398519 C1QTNF4Q9BXJ3 329 aa12.65□□□□□ -0.38
CSNK1D-204ENST00000398519 FAM74A7A6NL05 159 aa12.64□□□□□ -0.39
CSNK1D-204ENST00000398519 M0R2Z0 102 aa12.64□□□□□ -0.39
CSNK1D-204ENST00000398519 CT45A10P0DMU9 189 aa12.64□□□□□ -0.39
CSNK1D-204ENST00000398519 GNG5P63218 68 aa12.64□□□□□ -0.39
CSNK1D-204ENST00000398519 C9orf47Q6ZRZ4 202 aa12.64□□□□□ -0.39
CSNK1D-204ENST00000398519 VGLL1Q99990 258 aa12.64□□□□□ -0.39
CSNK1D-204ENST00000398519 AGPAT4-IT1Q9H0P7 198 aa12.64□□□□□ -0.39
CSNK1D-204ENST00000398519 RPH3ALQ9UNE2 315 aa12.64□□□□□ -0.39
CSNK1D-204ENST00000398519 TRAV1-1A0A0B4J248 108 aa12.64□□□□□ -0.39
CSNK1D-204ENST00000398519 ZNF705EA8MWA4 302 aaPredicted RBP12.64□□□□□ -0.39
CSNK1D-204ENST00000398519 SLC25A5P05141 298 aaKnown RBP12.64□□□□□ -0.39
CSNK1D-204ENST00000398519 SUMO1P63165 101 aaKnown RBP12.64□□□□□ -0.39
CSNK1D-204ENST00000398519 PPP1R14DQ9NXH3 145 aa12.64□□□□□ -0.39
CSNK1D-204ENST00000398519 U3KQK5 164 aa12.64□□□□□ -0.39
CSNK1D-204ENST00000398519 RBAKDNA6NC62 111 aa12.63□□□□□ -0.39
CSNK1D-204ENST00000398519 CRXO43186 299 aaPredicted RBP12.63□□□□□ -0.39
CSNK1D-204ENST00000398519 ARL6IP6Q8N6S5 226 aa12.63□□□□□ -0.39
CSNK1D-204ENST00000398519 C5orf17Q8NAS9 161 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms