RNA–Protein interactions for RNA: ENST00000398035.6

COLCA2-201, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-201ENST00000398035 CEMP1Q6PRD7 247 aaPredicted RBP13.59□□□□□ -0.23
COLCA2-201ENST00000398035 LYPD1Q8N2G4 141 aa13.59□□□□□ -0.23
COLCA2-201ENST00000398035 BLNKQ8WV28 456 aa13.59□□□□□ -0.23
COLCA2-201ENST00000398035 PSMG3Q9BT73 122 aaPredicted RBP13.59□□□□□ -0.23
COLCA2-201ENST00000398035 RFNGQ9Y644 331 aa13.59□□□□□ -0.23
COLCA2-201ENST00000398035 NDUFB4O95168 129 aa13.58□□□□□ -0.24
COLCA2-201ENST00000398035 HBE1P02100 147 aa13.58□□□□□ -0.24
COLCA2-201ENST00000398035 CDKN1BP46527 198 aa13.58□□□□□ -0.24
COLCA2-201ENST00000398035 PMS2P11Q13670 270 aa13.58□□□□□ -0.24
COLCA2-201ENST00000398035 SPINK13Q1W4C9 94 aa13.58□□□□□ -0.24
COLCA2-201ENST00000398035 OR2G3Q8NGZ4 309 aa13.58□□□□□ -0.24
COLCA2-201ENST00000398035 GNPNAT1Q96EK6 184 aaPredicted RBP13.58□□□□□ -0.24
COLCA2-201ENST00000398035 C11orf94C9JXX5 98 aa13.57□□□□□ -0.24
COLCA2-201ENST00000398035 TAAR5O14804 337 aa13.57□□□□□ -0.24
COLCA2-201ENST00000398035 C1orf158Q8N1D5 194 aa13.57□□□□□ -0.24
COLCA2-201ENST00000398035 TMEM256Q8N2U0 113 aa13.57□□□□□ -0.24
COLCA2-201ENST00000398035 HSD17B11Q8NBQ5 300 aa13.57□□□□□ -0.24
COLCA2-201ENST00000398035 OR10G4Q8NGN3 311 aa13.57□□□□□ -0.24
COLCA2-201ENST00000398035 OR10G9Q8NGN4 311 aa13.57□□□□□ -0.24
COLCA2-201ENST00000398035 OR10G7Q8NGN6 311 aa13.57□□□□□ -0.24
COLCA2-201ENST00000398035 PHLDA1Q8WV24 401 aaPredicted RBP13.57□□□□□ -0.24
COLCA2-201ENST00000398035 TEX48A0A1B0GUV7 120 aa13.56□□□□□ -0.24
COLCA2-201ENST00000398035 M0R2Z0 102 aa13.56□□□□□ -0.24
COLCA2-201ENST00000398035 CRXO43186 299 aaPredicted RBP13.56□□□□□ -0.24
COLCA2-201ENST00000398035 OR10J4P0C629 311 aa13.56□□□□□ -0.24
COLCA2-201ENST00000398035 RRN3P1Q2M238 152 aa13.56□□□□□ -0.24
COLCA2-201ENST00000398035 PQLC2Q6ZP29 291 aa13.56□□□□□ -0.24
COLCA2-201ENST00000398035 FXYD5Q96DB9 178 aa13.56□□□□□ -0.24
COLCA2-201ENST00000398035 LINC00477Q96M19 166 aa13.56□□□□□ -0.24
COLCA2-201ENST00000398035 ODF3Q96PU9 254 aa13.56□□□□□ -0.24
COLCA2-201ENST00000398035 AGRNO00468 2067 aa13.56□□□□□ -0.24
COLCA2-201ENST00000398035 RNF222A6NCQ9 220 aa13.56□□□□□ -0.24
COLCA2-201ENST00000398035 JTBO76095 146 aa13.56□□□□□ -0.24
COLCA2-201ENST00000398035 NANOS2P60321 138 aaKnown RBP13.56□□□□□ -0.24
COLCA2-201ENST00000398035 C20orf144Q9BQM9 153 aa13.56□□□□□ -0.24
COLCA2-201ENST00000398035 DNAH7Q8WXX0 4024 aa13.55□□□□□ -0.24
COLCA2-201ENST00000398035 PRAC2D3DTV9 90 aa13.55□□□□□ -0.24
COLCA2-201ENST00000398035 NPIPB6E9PJ23 425 aa13.55□□□□□ -0.24
COLCA2-201ENST00000398035 SPART-AS1P0CW21 52 aa13.55□□□□□ -0.24
COLCA2-201ENST00000398035 ATP6V0CP27449 155 aa13.55□□□□□ -0.24
COLCA2-201ENST00000398035 CSN1S1P47710 185 aa13.55□□□□□ -0.24
COLCA2-201ENST00000398035 ICAM4Q14773 271 aa13.55□□□□□ -0.24
COLCA2-201ENST00000398035 LEPP41159 167 aa13.54□□□□□ -0.24
COLCA2-201ENST00000398035 UBE2L3P68036 154 aaKnown RBP13.54□□□□□ -0.24
COLCA2-201ENST00000398035 FAM74A1Q5RGS3 127 aa13.54□□□□□ -0.24
COLCA2-201ENST00000398035 EXOC3-AS1Q8N2X6 119 aa13.54□□□□□ -0.24
COLCA2-201ENST00000398035 RPP25LQ8N5L8 163 aaKnown RBP13.54□□□□□ -0.24
COLCA2-201ENST00000398035 RXFP4Q8TDU9 374 aa13.54□□□□□ -0.24
COLCA2-201ENST00000398035 LINC01587Q99440 93 aa13.54□□□□□ -0.24
COLCA2-201ENST00000398035 TRAV12-2A0A075B6T6 113 aa13.53□□□□□ -0.24
COLCA2-201ENST00000398035 M0R3E3 92 aa13.53□□□□□ -0.24
COLCA2-201ENST00000398035 ARPC5O15511 151 aa13.53□□□□□ -0.24
COLCA2-201ENST00000398035 RANP62826 216 aaKnown RBP13.53□□□□□ -0.24
COLCA2-201ENST00000398035 BAP18Q8IXM2 172 aa13.53□□□□□ -0.24
COLCA2-201ENST00000398035 LCE6AA0A183 80 aa13.52□□□□□ -0.25
COLCA2-201ENST00000398035 LOC102723971A0A1B0GUV8 181 aa13.52□□□□□ -0.25
COLCA2-201ENST00000398035 CT45A10P0DMU9 189 aa13.52□□□□□ -0.25
COLCA2-201ENST00000398035 TCTAP57738 103 aa13.52□□□□□ -0.25
COLCA2-201ENST00000398035 TAS2R60P59551 318 aa13.52□□□□□ -0.25
COLCA2-201ENST00000398035 RAB2AP61019 212 aa13.52□□□□□ -0.25
COLCA2-201ENST00000398035 RPL7L1Q6DKI1 246 aaKnown RBP13.52□□□□□ -0.25
COLCA2-201ENST00000398035 ARL6IP6Q8N6S5 226 aa13.52□□□□□ -0.25
COLCA2-201ENST00000398035 ZNF503Q96F45 646 aa13.52□□□□□ -0.25
COLCA2-201ENST00000398035 HMSDA8MTL9 139 aa13.51□□□□□ -0.25
COLCA2-201ENST00000398035 G3V3Q6 166 aa13.51□□□□□ -0.25
COLCA2-201ENST00000398035 H7BYZ3 331 aa13.51□□□□□ -0.25
COLCA2-201ENST00000398035 NMBP08949 121 aa13.51□□□□□ -0.25
COLCA2-201ENST00000398035 CDC34P49427 236 aaPredicted RBP13.51□□□□□ -0.25
COLCA2-201ENST00000398035 EMP1P54849 157 aa13.51□□□□□ -0.25
COLCA2-201ENST00000398035 TMEM78Q5T7P6 136 aa13.51□□□□□ -0.25
COLCA2-201ENST00000398035 FAM122CQ6P4D5 195 aa13.51□□□□□ -0.25
COLCA2-201ENST00000398035 C9orf47Q6ZRZ4 202 aa13.51□□□□□ -0.25
COLCA2-201ENST00000398035 C2CD4CQ8TF44 421 aa13.51□□□□□ -0.25
COLCA2-201ENST00000398035 TRAV10A0A0B4J240 114 aa13.5□□□□□ -0.25
COLCA2-201ENST00000398035 ZNF345Q14585 488 aa13.5□□□□□ -0.25
COLCA2-201ENST00000398035 PHYHIPLQ96FC7 376 aa13.5□□□□□ -0.25
COLCA2-201ENST00000398035 ACTR3CQ9C0K3 210 aaPredicted RBP13.5□□□□□ -0.25
COLCA2-201ENST00000398035 AGPAT4-IT1Q9H0P7 198 aa13.5□□□□□ -0.25
COLCA2-201ENST00000398035 Q9H3A6 140 aa13.5□□□□□ -0.25
COLCA2-201ENST00000398035 TRBV7-9A0A0J9YWB2 115 aa13.49□□□□□ -0.25
COLCA2-201ENST00000398035 RBAKDNA6NC62 111 aa13.49□□□□□ -0.25
COLCA2-201ENST00000398035 SLC25A5P05141 298 aaKnown RBP13.49□□□□□ -0.25
COLCA2-201ENST00000398035 STAG3L2P0CL84 134 aa13.49□□□□□ -0.25
COLCA2-201ENST00000398035 STAG3L3P0CL85 134 aa13.49□□□□□ -0.25
COLCA2-201ENST00000398035 ZNF493Q6ZR52 646 aa13.49□□□□□ -0.25
COLCA2-201ENST00000398035 RAB24Q969Q5 203 aa13.49□□□□□ -0.25
COLCA2-201ENST00000398035 A0A0D9SG52 128 aa13.48□□□□□ -0.25
COLCA2-201ENST00000398035 PRB4P10163 310 aaPredicted RBP13.48□□□□□ -0.25
COLCA2-201ENST00000398035 C12orf74Q32Q52 190 aa13.48□□□□□ -0.25
COLCA2-201ENST00000398035 CCDC28AQ8IWP9 274 aa13.48□□□□□ -0.25
COLCA2-201ENST00000398035 CMTM2Q8TAZ6 248 aa13.48□□□□□ -0.25
COLCA2-201ENST00000398035 OTORQ9NRC9 128 aa13.48□□□□□ -0.25
COLCA2-201ENST00000398035 DKK2Q9UBU2 259 aa13.48□□□□□ -0.25
COLCA2-201ENST00000398035 YTHDF2Q9Y5A9 579 aaKnown RBP13.48□□□□□ -0.25
COLCA2-201ENST00000398035 ZNF705GA8MUZ8 300 aaPredicted RBP13.47□□□□□ -0.25
COLCA2-201ENST00000398035 ERCC8Q13216 396 aa13.47□□□□□ -0.25
COLCA2-201ENST00000398035 Q6ZTC4 211 aa13.47□□□□□ -0.25
COLCA2-201ENST00000398035 KCNRGQ8N5I3 272 aa13.47□□□□□ -0.25
COLCA2-201ENST00000398035 ARPC5LQ9BPX5 153 aa13.47□□□□□ -0.25
COLCA2-201ENST00000398035 NIPSNAP3BQ9BS92 247 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms