RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 DIRC3C9JPN6 131 aa14.69□□□□□ -0.06
PDLIM2-205ENST00000397761 OVOL1O14753 267 aa14.69□□□□□ -0.06
PDLIM2-205ENST00000397761 SNAPINO95295 136 aa14.69□□□□□ -0.06
PDLIM2-205ENST00000397761 S100A9P06702 114 aaKnown RBP14.69□□□□□ -0.06
PDLIM2-205ENST00000397761 CNN1P51911 297 aaKnown RBP14.69□□□□□ -0.06
PDLIM2-205ENST00000397761 TAS2R60P59551 318 aa14.69□□□□□ -0.06
PDLIM2-205ENST00000397761 PNRC1Q12796 327 aaPredicted RBP14.69□□□□□ -0.06
PDLIM2-205ENST00000397761 SAMD13Q5VXD3 122 aa14.69□□□□□ -0.06
PDLIM2-205ENST00000397761 CLRN3Q8NCR9 226 aa14.69□□□□□ -0.06
PDLIM2-205ENST00000397761 TVP23CQ96ET8 276 aa14.69□□□□□ -0.06
PDLIM2-205ENST00000397761 LY96Q9Y6Y9 160 aa14.69□□□□□ -0.06
PDLIM2-205ENST00000397761 SERTM2A0A1B0GWG4 89 aa14.69□□□□□ -0.06
PDLIM2-205ENST00000397761 TMEM183BQ1AE95 376 aa14.69□□□□□ -0.06
PDLIM2-205ENST00000397761 DCANP1Q8TF63 244 aa14.69□□□□□ -0.06
PDLIM2-205ENST00000397761 IGF2BP2-AS1Q96M15 143 aa14.69□□□□□ -0.06
PDLIM2-205ENST00000397761 TRBV6-1A0A0K0K1D8 114 aa14.68□□□□□ -0.06
PDLIM2-205ENST00000397761 ISLRO14498 428 aa14.68□□□□□ -0.06
PDLIM2-205ENST00000397761 IGLV2-11P01706 119 aa14.68□□□□□ -0.06
PDLIM2-205ENST00000397761 HLA-DMBP28068 263 aa14.68□□□□□ -0.06
PDLIM2-205ENST00000397761 LINC00479Q96M42 142 aa14.68□□□□□ -0.06
PDLIM2-205ENST00000397761 VWFP04275 2813 aa14.67□□□□□ -0.06
PDLIM2-205ENST00000397761 SORL1Q92673 2214 aa14.67□□□□□ -0.06
PDLIM2-205ENST00000397761 CSN1S1P47710 185 aa14.67□□□□□ -0.06
PDLIM2-205ENST00000397761 IGFL4Q6B9Z1 124 aa14.67□□□□□ -0.06
PDLIM2-205ENST00000397761 LCN12Q6JVE5 192 aa14.67□□□□□ -0.06
PDLIM2-205ENST00000397761 ATRAIDQ6UW56 229 aa14.67□□□□□ -0.06
PDLIM2-205ENST00000397761 GOLT1AQ6ZVE7 132 aa14.67□□□□□ -0.06
PDLIM2-205ENST00000397761 TMEM75Q8N9X5 138 aa14.67□□□□□ -0.06
PDLIM2-205ENST00000397761 FMC1Q96HJ9 113 aa14.67□□□□□ -0.06
PDLIM2-205ENST00000397761 C16orf92Q96LL3 132 aa14.67□□□□□ -0.06
PDLIM2-205ENST00000397761 RPL23P62829 140 aaKnown RBP14.66□□□□□ -0.06
PDLIM2-205ENST00000397761 RPL11P62913 178 aaKnown RBP14.66□□□□□ -0.06
PDLIM2-205ENST00000397761 PSG3Q16557 428 aa14.66□□□□□ -0.06
PDLIM2-205ENST00000397761 CENPWQ5EE01 88 aa14.66□□□□□ -0.06
PDLIM2-205ENST00000397761 LINC01551Q86U37 167 aa14.66□□□□□ -0.06
PDLIM2-205ENST00000397761 RNF182Q8N6D2 247 aa14.66□□□□□ -0.06
PDLIM2-205ENST00000397761 MS4A6AQ9H2W1 248 aa14.66□□□□□ -0.06
PDLIM2-205ENST00000397761 K7EQM0 130 aa14.65□□□□□ -0.06
PDLIM2-205ENST00000397761 IGLV2-8P01709 118 aa14.65□□□□□ -0.06
PDLIM2-205ENST00000397761 GNG4P50150 75 aa14.65□□□□□ -0.06
PDLIM2-205ENST00000397761 DEFB114Q30KQ6 69 aa14.65□□□□□ -0.06
PDLIM2-205ENST00000397761 RPH3ALQ9UNE2 315 aa14.65□□□□□ -0.06
PDLIM2-205ENST00000397761 TRAV2A0A0B4J234 112 aa14.64□□□□□ -0.07
PDLIM2-205ENST00000397761 TRAV34A0A0B4J273 112 aa14.64□□□□□ -0.07
PDLIM2-205ENST00000397761 RBAKDNA6NC62 111 aa14.64□□□□□ -0.07
PDLIM2-205ENST00000397761 ZNF705FA8MVS1 300 aaPredicted RBP14.64□□□□□ -0.07
PDLIM2-205ENST00000397761 B4DEV8 164 aa14.64□□□□□ -0.07
PDLIM2-205ENST00000397761 K7EQG2 157 aa14.64□□□□□ -0.07
PDLIM2-205ENST00000397761 RHEBQ15382 184 aa14.64□□□□□ -0.07
PDLIM2-205ENST00000397761 OCC1Q8TAD7 63 aa14.64□□□□□ -0.07
PDLIM2-205ENST00000397761 SMIM12Q96EX1 92 aa14.64□□□□□ -0.07
PDLIM2-205ENST00000397761 C20orf173Q96LM9 149 aa14.64□□□□□ -0.07
PDLIM2-205ENST00000397761 SELENOKQ9Y6D0 94 aa14.64□□□□□ -0.07
PDLIM2-205ENST00000397761 PGPEP1LA6NFU8 196 aa14.63□□□□□ -0.07
PDLIM2-205ENST00000397761 FBLL1A6NHQ2 334 aaKnown RBP14.63□□□□□ -0.07
PDLIM2-205ENST00000397761 M0R036 132 aa14.63□□□□□ -0.07
PDLIM2-205ENST00000397761 TSPAN4O14817 238 aa14.63□□□□□ -0.07
PDLIM2-205ENST00000397761 LTAP01374 205 aa14.63□□□□□ -0.07
PDLIM2-205ENST00000397761 UBE2G1P62253 170 aa14.63□□□□□ -0.07
PDLIM2-205ENST00000397761 LINC00482Q8N8I6 264 aa14.63□□□□□ -0.07
PDLIM2-205ENST00000397761 TRAV8-1A0A0A6YYK1 113 aa14.63□□□□□ -0.07
PDLIM2-205ENST00000397761 TRAV25A0A0B4J276 109 aa14.63□□□□□ -0.07
PDLIM2-205ENST00000397761 C7orf77A4D0Y5 90 aa14.63□□□□□ -0.07
PDLIM2-205ENST00000397761 Q86TA4 180 aa14.63□□□□□ -0.07
PDLIM2-205ENST00000397761 TMEM61Q8N0U2 210 aa14.63□□□□□ -0.07
PDLIM2-205ENST00000397761 TMEM158Q8WZ71 300 aa14.63□□□□□ -0.07
PDLIM2-205ENST00000397761 MLST8Q9BVC4 326 aa14.63□□□□□ -0.07
PDLIM2-205ENST00000397761 IGKV3-7A0A075B6H7 116 aa14.62□□□□□ -0.07
PDLIM2-205ENST00000397761 PRAC2D3DTV9 90 aa14.62□□□□□ -0.07
PDLIM2-205ENST00000397761 ID1P41134 155 aa14.62□□□□□ -0.07
PDLIM2-205ENST00000397761 FLI1Q01543 452 aaPredicted RBP14.62□□□□□ -0.07
PDLIM2-205ENST00000397761 ADIRFQ15847 76 aa14.62□□□□□ -0.07
PDLIM2-205ENST00000397761 GBGT1Q8N5D6 347 aa14.62□□□□□ -0.07
PDLIM2-205ENST00000397761 DYNLRB2Q8TF09 96 aa14.62□□□□□ -0.07
PDLIM2-205ENST00000397761 ZNF747Q9BV97 191 aa14.62□□□□□ -0.07
PDLIM2-205ENST00000397761 K7EN84 100 aa14.61□□□□□ -0.07
PDLIM2-205ENST00000397761 BAGE2Q86Y30 109 aa14.61□□□□□ -0.07
PDLIM2-205ENST00000397761 ISOC2Q96AB3 205 aa14.61□□□□□ -0.07
PDLIM2-205ENST00000397761 SGK494Q96LW2 274 aa14.61□□□□□ -0.07
PDLIM2-205ENST00000397761 PSG8Q9UQ74 426 aa14.61□□□□□ -0.07
PDLIM2-205ENST00000397761 IGKV2-40A0A087WW87 121 aaPredicted RBP14.6□□□□□ -0.07
PDLIM2-205ENST00000397761 A0A087WWC5 75 aa14.6□□□□□ -0.07
PDLIM2-205ENST00000397761 IGKV2D-40P01614 121 aaPredicted RBP14.6□□□□□ -0.07
PDLIM2-205ENST00000397761 PF4P02776 101 aa14.6□□□□□ -0.07
PDLIM2-205ENST00000397761 PAFAH1B2P68402 229 aa14.6□□□□□ -0.07
PDLIM2-205ENST00000397761 SPATA3Q8NHX4 192 aa14.6□□□□□ -0.07
PDLIM2-205ENST00000397761 ZFP30Q9Y2G7 519 aa14.6□□□□□ -0.07
PDLIM2-205ENST00000397761 DNASE2O00115 360 aaPredicted RBP14.59□□□□□ -0.07
PDLIM2-205ENST00000397761 GCGP01275 180 aa14.59□□□□□ -0.07
PDLIM2-205ENST00000397761 CD300EQ496F6 205 aaPredicted RBP14.59□□□□□ -0.07
PDLIM2-205ENST00000397761 RBPMS2Q6ZRY4 209 aaKnown RBP14.59□□□□□ -0.07
PDLIM2-205ENST00000397761 C9orf47Q6ZRZ4 202 aa14.59□□□□□ -0.07
PDLIM2-205ENST00000397761 ZNF738Q8NE65 137 aa14.59□□□□□ -0.07
PDLIM2-205ENST00000397761 VGLL1Q99990 258 aa14.59□□□□□ -0.07
PDLIM2-205ENST00000397761 AURKAIP1Q9NWT8 199 aaPredicted RBP14.59□□□□□ -0.07
PDLIM2-205ENST00000397761 PPP1R14DQ9NXH3 145 aa14.59□□□□□ -0.07
PDLIM2-205ENST00000397761 SCO1O75880 301 aa14.58□□□□□ -0.08
PDLIM2-205ENST00000397761 IGLV1-51P01701 117 aa14.58□□□□□ -0.08
PDLIM2-205ENST00000397761 COX8CQ7Z4L0 72 aa14.58□□□□□ -0.08
PDLIM2-205ENST00000397761 TMEM183AQ8IXX5 376 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms