RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 VGLL1Q99990 258 aa7.25□□□□□ -1.25
CAPN3-206ENST00000397163 SCNM1Q9BWG6 230 aa7.25□□□□□ -1.25
CAPN3-206ENST00000397163 NGBQ9NPG2 151 aa7.25□□□□□ -1.25
CAPN3-206ENST00000397163 SIGLEC8Q9NYZ4 499 aa7.25□□□□□ -1.25
CAPN3-206ENST00000397163 DKK2Q9UBU2 259 aa7.25□□□□□ -1.25
CAPN3-206ENST00000397163 AGRNO00468 2067 aa7.25□□□□□ -1.25
CAPN3-206ENST00000397163 A0A096LNJ9 63 aa7.25□□□□□ -1.25
CAPN3-206ENST00000397163 PRB3Q04118 309 aaPredicted RBP7.25□□□□□ -1.25
CAPN3-206ENST00000397163 CFAP161Q6P656 301 aa7.25□□□□□ -1.25
CAPN3-206ENST00000397163 SFTA2Q6UW10 78 aa7.25□□□□□ -1.25
CAPN3-206ENST00000397163 IGKV2D-26A0A0A0MRZ7 120 aa7.25□□□□□ -1.25
CAPN3-206ENST00000397163 TMEM213A2RRL7 107 aa7.25□□□□□ -1.25
CAPN3-206ENST00000397163 C17orf100A8MU93 164 aa7.25□□□□□ -1.25
CAPN3-206ENST00000397163 DEFB109BQ30KR1 87 aa7.25□□□□□ -1.25
CAPN3-206ENST00000397163 LGALS9BQ3B8N2 356 aa7.25□□□□□ -1.25
CAPN3-206ENST00000397163 C3orf36Q3SXR2 165 aa7.25□□□□□ -1.25
CAPN3-206ENST00000397163 Q6AWC8 147 aa7.25□□□□□ -1.25
CAPN3-206ENST00000397163 LGALS9CQ6DKI2 356 aa7.25□□□□□ -1.25
CAPN3-206ENST00000397163 AMN1Q8IY45 258 aa7.25□□□□□ -1.25
CAPN3-206ENST00000397163 TMEM75Q8N9X5 138 aa7.25□□□□□ -1.25
CAPN3-206ENST00000397163 DPF1Q92782 380 aa7.25□□□□□ -1.25
CAPN3-206ENST00000397163 ZNF414Q96IQ9 312 aa7.25□□□□□ -1.25
CAPN3-206ENST00000397163 TMEM133Q9H2Q1 129 aa7.25□□□□□ -1.25
CAPN3-206ENST00000397163 MAP1BP46821 2468 aaKnown RBP7.25□□□□□ -1.25
CAPN3-206ENST00000397163 TRBV19A0A075B6N1 114 aa7.24□□□□□ -1.25
CAPN3-206ENST00000397163 M0R3E3 92 aa7.24□□□□□ -1.25
CAPN3-206ENST00000397163 CRIP1P50238 77 aa7.24□□□□□ -1.25
CAPN3-206ENST00000397163 PVRIGQ6DKI7 326 aa7.24□□□□□ -1.25
CAPN3-206ENST00000397163 IGFL2Q6UWQ7 119 aa7.24□□□□□ -1.25
CAPN3-206ENST00000397163 MRAP2Q96G30 205 aa7.24□□□□□ -1.25
CAPN3-206ENST00000397163 SIGLEC9Q9Y336 463 aa7.24□□□□□ -1.25
CAPN3-206ENST00000397163 HOXB4P17483 251 aaPredicted RBP7.24□□□□□ -1.25
CAPN3-206ENST00000397163 DLX1P56177 255 aa7.24□□□□□ -1.25
CAPN3-206ENST00000397163 LYZL1Q6UWQ5 148 aa7.24□□□□□ -1.25
CAPN3-206ENST00000397163 ORMDL3Q8N138 153 aa7.24□□□□□ -1.25
CAPN3-206ENST00000397163 GATD1Q8NB37 220 aa7.24□□□□□ -1.25
CAPN3-206ENST00000397163 OR9G4Q8NGQ1 327 aa7.24□□□□□ -1.25
CAPN3-206ENST00000397163 FAM215AQ9Y5M1 114 aa7.24□□□□□ -1.25
CAPN3-206ENST00000397163 SPTBN4Q9H254 2564 aa7.24□□□□□ -1.25
CAPN3-206ENST00000397163 TRBV6-1A0A0K0K1D8 114 aa7.23□□□□□ -1.25
CAPN3-206ENST00000397163 SMKR1H3BMG3 65 aa7.23□□□□□ -1.25
CAPN3-206ENST00000397163 C16orf97H3BN30 126 aa7.23□□□□□ -1.25
CAPN3-206ENST00000397163 HBDP02042 147 aa7.23□□□□□ -1.25
CAPN3-206ENST00000397163 PLGLAQ15195 96 aa7.23□□□□□ -1.25
CAPN3-206ENST00000397163 GLMPQ8WWB7 406 aa7.23□□□□□ -1.25
CAPN3-206ENST00000397163 C8orf49Q96NF6 230 aa7.23□□□□□ -1.25
CAPN3-206ENST00000397163 TMEM189A5PLL7 270 aa7.23□□□□□ -1.25
CAPN3-206ENST00000397163 TMEM178BH3BS89 294 aa7.23□□□□□ -1.25
CAPN3-206ENST00000397163 IGHV1-8P0DP01 117 aa7.23□□□□□ -1.25
CAPN3-206ENST00000397163 FCER1GP30273 86 aa7.23□□□□□ -1.25
CAPN3-206ENST00000397163 FAM104BQ5XKR9 115 aa7.23□□□□□ -1.25
CAPN3-206ENST00000397163 SIGLEC15Q6ZMC9 328 aa7.23□□□□□ -1.25
CAPN3-206ENST00000397163 PPP1R27Q86WC6 154 aa7.23□□□□□ -1.25
CAPN3-206ENST00000397163 C8orf31Q8N9H6 132 aa7.23□□□□□ -1.25
CAPN3-206ENST00000397163 OR4X2Q8NGF9 303 aa7.23□□□□□ -1.25
CAPN3-206ENST00000397163 IFI27L1Q96BM0 104 aa7.23□□□□□ -1.25
CAPN3-206ENST00000397163 RNF183Q96D59 192 aa7.23□□□□□ -1.25
CAPN3-206ENST00000397163 SPATA25Q9BR10 227 aa7.23□□□□□ -1.25
CAPN3-206ENST00000397163 FBXL15Q9H469 300 aa7.23□□□□□ -1.25
CAPN3-206ENST00000397163 J3QR89 54 aa7.23□□□□□ -1.25
CAPN3-206ENST00000397163 IGKV1-17P01599 117 aa7.23□□□□□ -1.25
CAPN3-206ENST00000397163 MT-ATP8P03928 68 aa7.23□□□□□ -1.25
CAPN3-206ENST00000397163 LOXP28300 417 aaPredicted RBP7.23□□□□□ -1.25
CAPN3-206ENST00000397163 ANXA2RQ3ZCQ2 193 aa7.23□□□□□ -1.25
CAPN3-206ENST00000397163 SHANK2-AS3Q9BTD1 123 aa7.23□□□□□ -1.25
CAPN3-206ENST00000397163 CTSZQ9UBR2 303 aa7.23□□□□□ -1.25
CAPN3-206ENST00000397163 PKDREJQ9NTG1 2253 aa7.23□□□□□ -1.25
CAPN3-206ENST00000397163 A0A1W2PRD5 423 aa7.22□□□□□ -1.25
CAPN3-206ENST00000397163 A0A1W2PRF3 423 aa7.22□□□□□ -1.25
CAPN3-206ENST00000397163 A0A1W2PRM7 423 aa7.22□□□□□ -1.25
CAPN3-206ENST00000397163 TEX22C9J3V5 150 aa7.22□□□□□ -1.25
CAPN3-206ENST00000397163 SPINK8P0C7L1 97 aa7.22□□□□□ -1.25
CAPN3-206ENST00000397163 ADIPOQQ15848 244 aa7.22□□□□□ -1.25
CAPN3-206ENST00000397163 ZNF493Q6ZR52 646 aa7.22□□□□□ -1.25
CAPN3-206ENST00000397163 SYT8Q8NBV8 401 aa7.22□□□□□ -1.25
CAPN3-206ENST00000397163 CHAC1Q9BUX1 264 aa7.22□□□□□ -1.25
CAPN3-206ENST00000397163 CKS2P33552 79 aa7.22□□□□□ -1.25
CAPN3-206ENST00000397163 MRPL51Q4U2R6 128 aaKnown RBP7.22□□□□□ -1.25
CAPN3-206ENST00000397163 TMEM155Q4W5P6 130 aa7.22□□□□□ -1.25
CAPN3-206ENST00000397163 SHISA2Q6UWI4 295 aa7.22□□□□□ -1.25
CAPN3-206ENST00000397163 NUP37Q8NFH4 326 aa7.22□□□□□ -1.25
CAPN3-206ENST00000397163 DMXL2Q8TDJ6 3036 aa7.22□□□□□ -1.25
CAPN3-206ENST00000397163 A0A1B0GWB2 263 aa7.22□□□□□ -1.25
CAPN3-206ENST00000397163 I3L2K1 104 aa7.22□□□□□ -1.25
CAPN3-206ENST00000397163 CNIH1O95406 144 aa7.22□□□□□ -1.25
CAPN3-206ENST00000397163 IL4P05112 153 aa7.22□□□□□ -1.25
CAPN3-206ENST00000397163 CRYGBP07316 175 aa7.22□□□□□ -1.25
CAPN3-206ENST00000397163 ZNF479Q96JC4 524 aa7.22□□□□□ -1.25
CAPN3-206ENST00000397163 H3BRN7 92 aa7.21□□□□□ -1.26
CAPN3-206ENST00000397163 SIVA1O15304 175 aa7.21□□□□□ -1.26
CAPN3-206ENST00000397163 DLX6P56179 175 aa7.21□□□□□ -1.26
CAPN3-206ENST00000397163 GTSCR1Q86UQ5 136 aa7.21□□□□□ -1.26
CAPN3-206ENST00000397163 AAMDCQ9H7C9 122 aa7.21□□□□□ -1.26
CAPN3-206ENST00000397163 PRRG2O14669 202 aa7.21□□□□□ -1.26
CAPN3-206ENST00000397163 SH2D1AO60880 128 aa7.21□□□□□ -1.26
CAPN3-206ENST00000397163 TWIST1Q15672 202 aa7.21□□□□□ -1.26
CAPN3-206ENST00000397163 TCTEX1D4Q5JR98 221 aa7.21□□□□□ -1.26
CAPN3-206ENST00000397163 LYPD1Q8N2G4 141 aa7.21□□□□□ -1.26
CAPN3-206ENST00000397163 RNF125Q96EQ8 232 aa7.21□□□□□ -1.26
CAPN3-206ENST00000397163 S4R3C0 116 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms