RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 EIF5A2Q9GZV4 153 aaKnown RBP7.64□□□□□ -1.19
NEDD8-202ENST00000396828 TMPRSS5Q9H3S3 457 aa7.64□□□□□ -1.19
NEDD8-202ENST00000396828 DNAH2Q9P225 4427 aa7.64□□□□□ -1.19
NEDD8-202ENST00000396828 DNAH6Q9C0G6 4158 aa7.63□□□□□ -1.19
NEDD8-202ENST00000396828 IGHV3OR16-13A0A075B7E8 117 aa7.63□□□□□ -1.19
NEDD8-202ENST00000396828 IGHV3-74A0A0B4J1X5 117 aa7.63□□□□□ -1.19
NEDD8-202ENST00000396828 RAB19A4D1S5 217 aa7.63□□□□□ -1.19
NEDD8-202ENST00000396828 RBFOX3A6NFN3 312 aa7.63□□□□□ -1.19
NEDD8-202ENST00000396828 CHEK1O14757 476 aa7.63□□□□□ -1.19
NEDD8-202ENST00000396828 APOHP02749 345 aaPredicted RBP7.63□□□□□ -1.19
NEDD8-202ENST00000396828 CD5P06127 495 aa7.63□□□□□ -1.19
NEDD8-202ENST00000396828 NBEAP1P0C6P0 100 aa7.63□□□□□ -1.19
NEDD8-202ENST00000396828 HIST1H1EP10412 219 aaKnown RBP7.63□□□□□ -1.19
NEDD8-202ENST00000396828 MEOX2P50222 304 aa7.63□□□□□ -1.19
NEDD8-202ENST00000396828 PEA15Q15121 130 aa7.63□□□□□ -1.19
NEDD8-202ENST00000396828 CST9LP1Q5W188 147 aa7.63□□□□□ -1.19
NEDD8-202ENST00000396828 SIGLEC15Q6ZMC9 328 aa7.63□□□□□ -1.19
NEDD8-202ENST00000396828 BLNKQ8WV28 456 aa7.63□□□□□ -1.19
NEDD8-202ENST00000396828 KRTAP17-1Q9BYP8 105 aa7.63□□□□□ -1.19
NEDD8-202ENST00000396828 NKX6-2Q9C056 277 aaPredicted RBP7.63□□□□□ -1.19
NEDD8-202ENST00000396828 ARL2-SNX15V9GYD0 113 aa7.63□□□□□ -1.19
NEDD8-202ENST00000396828 A0A1W2PRE2 83 aa7.62□□□□□ -1.19
NEDD8-202ENST00000396828 PAGE4O60829 102 aa7.62□□□□□ -1.19
NEDD8-202ENST00000396828 LY6G6CO95867 125 aa7.62□□□□□ -1.19
NEDD8-202ENST00000396828 IGLC2P0DOY2 106 aa7.62□□□□□ -1.19
NEDD8-202ENST00000396828 BCL2P10415 239 aa7.62□□□□□ -1.19
NEDD8-202ENST00000396828 UBE2G2P60604 165 aa7.62□□□□□ -1.19
NEDD8-202ENST00000396828 RPL11P62913 178 aaKnown RBP7.62□□□□□ -1.19
NEDD8-202ENST00000396828 PDE6HQ13956 83 aa7.62□□□□□ -1.19
NEDD8-202ENST00000396828 ZNF124Q15973 351 aa7.62□□□□□ -1.19
NEDD8-202ENST00000396828 DEFB135Q30KP9 77 aa7.62□□□□□ -1.19
NEDD8-202ENST00000396828 ODF3L2Q3SX64 289 aa7.62□□□□□ -1.19
NEDD8-202ENST00000396828 TOR2AQ5JU69 321 aa7.62□□□□□ -1.19
NEDD8-202ENST00000396828 UQCC3Q6UW78 93 aa7.62□□□□□ -1.19
NEDD8-202ENST00000396828 RBPMS2Q6ZRY4 209 aaKnown RBP7.62□□□□□ -1.19
NEDD8-202ENST00000396828 SUN5Q8TC36 379 aa7.62□□□□□ -1.19
NEDD8-202ENST00000396828 GLMPQ8WWB7 406 aa7.62□□□□□ -1.19
NEDD8-202ENST00000396828 TXNDC17Q9BRA2 123 aa7.62□□□□□ -1.19
NEDD8-202ENST00000396828 SMDT1Q9H4I9 107 aa7.62□□□□□ -1.19
NEDD8-202ENST00000396828 VAX2Q9UIW0 290 aa7.62□□□□□ -1.19
NEDD8-202ENST00000396828 TRBV19A0A075B6N1 114 aa7.61□□□□□ -1.19
NEDD8-202ENST00000396828 A0A087X0K7 114 aa7.61□□□□□ -1.19
NEDD8-202ENST00000396828 TRAV25A0A0B4J276 109 aa7.61□□□□□ -1.19
NEDD8-202ENST00000396828 LOC102723971A0A1B0GUV8 181 aa7.61□□□□□ -1.19
NEDD8-202ENST00000396828 CXorf65A6NEN9 183 aa7.61□□□□□ -1.19
NEDD8-202ENST00000396828 H3BQ15 152 aa7.61□□□□□ -1.19
NEDD8-202ENST00000396828 MRPS12O15235 138 aaKnown RBP7.61□□□□□ -1.19
NEDD8-202ENST00000396828 SPRY2O43597 315 aa7.61□□□□□ -1.19
NEDD8-202ENST00000396828 ZNF253O75346 499 aa7.61□□□□□ -1.19
NEDD8-202ENST00000396828 RPL35AP18077 110 aaKnown RBP7.61□□□□□ -1.19
NEDD8-202ENST00000396828 RANP62826 216 aaKnown RBP7.61□□□□□ -1.19
NEDD8-202ENST00000396828 PSG9Q00887 426 aa7.61□□□□□ -1.19
NEDD8-202ENST00000396828 MEF2BQ02080 365 aaPredicted RBP7.61□□□□□ -1.19
NEDD8-202ENST00000396828 ZNF506Q5JVG8 444 aa7.61□□□□□ -1.19
NEDD8-202ENST00000396828 TCF24Q7RTU0 167 aa7.61□□□□□ -1.19
NEDD8-202ENST00000396828 LYPD1Q8N2G4 141 aa7.61□□□□□ -1.19
NEDD8-202ENST00000396828 AAMDCQ9H7C9 122 aa7.61□□□□□ -1.19
NEDD8-202ENST00000396828 TREM1Q9NP99 234 aa7.61□□□□□ -1.19
NEDD8-202ENST00000396828 ZNF586Q9NXT0 402 aa7.61□□□□□ -1.19
NEDD8-202ENST00000396828 FAT2Q9NYQ8 4349 aa7.61□□□□□ -1.19
NEDD8-202ENST00000396828 FAM74A7A6NL05 159 aa7.6□□□□□ -1.19
NEDD8-202ENST00000396828 C11orf94C9JXX5 98 aa7.6□□□□□ -1.19
NEDD8-202ENST00000396828 PDE6DO43924 150 aa7.6□□□□□ -1.19
NEDD8-202ENST00000396828 SNRPCP09234 159 aaKnown RBP7.6□□□□□ -1.19
NEDD8-202ENST00000396828 PAFAH1B2P68402 229 aa7.6□□□□□ -1.19
NEDD8-202ENST00000396828 SAMD13Q5VXD3 122 aa7.6□□□□□ -1.19
NEDD8-202ENST00000396828 Q6ZWC4 215 aa7.6□□□□□ -1.19
NEDD8-202ENST00000396828 WFDC3Q8IUB2 231 aa7.6□□□□□ -1.19
NEDD8-202ENST00000396828 SLC7A5P1Q8MH63 180 aa7.6□□□□□ -1.19
NEDD8-202ENST00000396828 EIF4E3Q8N5X7 224 aaKnown RBP7.6□□□□□ -1.19
NEDD8-202ENST00000396828 RXFP4Q8TDU9 374 aa7.6□□□□□ -1.19
NEDD8-202ENST00000396828 SPAG8Q99932 426 aaPredicted RBP7.6□□□□□ -1.19
NEDD8-202ENST00000396828 RARRES2Q99969 163 aa7.6□□□□□ -1.19
NEDD8-202ENST00000396828 SLC50A1Q9BRV3 221 aa7.6□□□□□ -1.19
NEDD8-202ENST00000396828 OTORQ9NRC9 128 aa7.6□□□□□ -1.19
NEDD8-202ENST00000396828 HERC2O95714 4834 aa7.59□□□□□ -1.19
NEDD8-202ENST00000396828 F6UZH7 168 aa7.59□□□□□ -1.19
NEDD8-202ENST00000396828 H3BTX0 84 aa7.59□□□□□ -1.19
NEDD8-202ENST00000396828 TSPAN4O14817 238 aa7.59□□□□□ -1.19
NEDD8-202ENST00000396828 ICAM4Q14773 271 aa7.59□□□□□ -1.19
NEDD8-202ENST00000396828 CEMP1Q6PRD7 247 aaPredicted RBP7.59□□□□□ -1.19
NEDD8-202ENST00000396828 APRG1Q8IVJ8 170 aa7.59□□□□□ -1.19
NEDD8-202ENST00000396828 RNF183Q96D59 192 aa7.59□□□□□ -1.19
NEDD8-202ENST00000396828 C17orf77Q96MU5 243 aa7.59□□□□□ -1.19
NEDD8-202ENST00000396828 TCEAL7Q9BRU2 100 aa7.59□□□□□ -1.19
NEDD8-202ENST00000396828 Q9H3A6 140 aa7.59□□□□□ -1.19
NEDD8-202ENST00000396828 NRN1Q9NPD7 142 aa7.59□□□□□ -1.19
NEDD8-202ENST00000396828 YTHDF2Q9Y5A9 579 aaKnown RBP7.59□□□□□ -1.19
NEDD8-202ENST00000396828 PGPA6NDG6 321 aa7.58□□□□□ -1.2
NEDD8-202ENST00000396828 DNASE2O00115 360 aaPredicted RBP7.58□□□□□ -1.2
NEDD8-202ENST00000396828 NDUFS6O75380 124 aaKnown RBP7.58□□□□□ -1.2
NEDD8-202ENST00000396828 NDUFB4O95168 129 aa7.58□□□□□ -1.2
NEDD8-202ENST00000396828 CSN1S1P47710 185 aa7.58□□□□□ -1.2
NEDD8-202ENST00000396828 ATP5G3P48201 142 aa7.58□□□□□ -1.2
NEDD8-202ENST00000396828 SUMO1P63165 101 aaKnown RBP7.58□□□□□ -1.2
NEDD8-202ENST00000396828 SRSF3P84103 164 aaKnown RBP7.58□□□□□ -1.2
NEDD8-202ENST00000396828 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.58□□□□□ -1.2
NEDD8-202ENST00000396828 CMTM2Q8TAZ6 248 aa7.58□□□□□ -1.2
NEDD8-202ENST00000396828 C16orf92Q96LL3 132 aa7.58□□□□□ -1.2
NEDD8-202ENST00000396828 ZNF331Q9NQX6 463 aaPredicted RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 206.9 ms