RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 ELANEP08246 267 aa13.32□□□□□ -0.28
TNFSF13-205ENST00000396545 IGLC2P0DOY2 106 aa13.32□□□□□ -0.28
TNFSF13-205ENST00000396545 RELQ04864 619 aaPredicted RBP13.32□□□□□ -0.28
TNFSF13-205ENST00000396545 BPIFA4PQ86YQ2 179 aa13.32□□□□□ -0.28
TNFSF13-205ENST00000396545 RNF152Q8N8N0 203 aa13.32□□□□□ -0.28
TNFSF13-205ENST00000396545 C5orf17Q8NAS9 161 aa13.32□□□□□ -0.28
TNFSF13-205ENST00000396545 Q9H3A6 140 aa13.32□□□□□ -0.28
TNFSF13-205ENST00000396545 SAV1Q9H4B6 383 aaPredicted RBP13.32□□□□□ -0.28
TNFSF13-205ENST00000396545 KLF12Q9Y4X4 402 aa13.32□□□□□ -0.28
TNFSF13-205ENST00000396545 ZNF98A6NK75 572 aa13.31□□□□□ -0.28
TNFSF13-205ENST00000396545 CLEC3BP05452 202 aa13.31□□□□□ -0.28
TNFSF13-205ENST00000396545 PSMB8P28062 276 aa13.31□□□□□ -0.28
TNFSF13-205ENST00000396545 ADMP35318 185 aa13.31□□□□□ -0.28
TNFSF13-205ENST00000396545 RAB9AP51151 201 aa13.31□□□□□ -0.28
TNFSF13-205ENST00000396545 TMEM183BQ1AE95 376 aa13.31□□□□□ -0.28
TNFSF13-205ENST00000396545 LCNL1Q6ZST4 164 aa13.31□□□□□ -0.28
TNFSF13-205ENST00000396545 BTF3L4Q96K17 158 aa13.31□□□□□ -0.28
TNFSF13-205ENST00000396545 OTORQ9NRC9 128 aa13.31□□□□□ -0.28
TNFSF13-205ENST00000396545 TRGC2P03986 189 aa13.3□□□□□ -0.28
TNFSF13-205ENST00000396545 SLC25A5P05141 298 aaKnown RBP13.3□□□□□ -0.28
TNFSF13-205ENST00000396545 GPR183P32249 361 aa13.3□□□□□ -0.28
TNFSF13-205ENST00000396545 FOXE3Q13461 319 aa13.3□□□□□ -0.28
TNFSF13-205ENST00000396545 DEFB136Q30KP8 78 aa13.3□□□□□ -0.28
TNFSF13-205ENST00000396545 LINC00479Q96M42 142 aa13.3□□□□□ -0.28
TNFSF13-205ENST00000396545 CCDC140Q96MF4 163 aa13.3□□□□□ -0.28
TNFSF13-205ENST00000396545 ATG101Q9BSB4 218 aa13.3□□□□□ -0.28
TNFSF13-205ENST00000396545 CHRDL1Q9BU40 450 aa13.3□□□□□ -0.28
TNFSF13-205ENST00000396545 OSTCQ9NRP0 149 aa13.3□□□□□ -0.28
TNFSF13-205ENST00000396545 TRBV19A0A075B6N1 114 aa13.29□□□□□ -0.28
TNFSF13-205ENST00000396545 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.29□□□□□ -0.28
TNFSF13-205ENST00000396545 A0A1W2PPQ1 181 aa13.29□□□□□ -0.28
TNFSF13-205ENST00000396545 ISLRO14498 428 aa13.29□□□□□ -0.28
TNFSF13-205ENST00000396545 S100A9P06702 114 aaKnown RBP13.29□□□□□ -0.28
TNFSF13-205ENST00000396545 SNRPCP09234 159 aaKnown RBP13.29□□□□□ -0.28
TNFSF13-205ENST00000396545 CDX1P47902 265 aaPredicted RBP13.29□□□□□ -0.28
TNFSF13-205ENST00000396545 GNG5P63218 68 aa13.29□□□□□ -0.28
TNFSF13-205ENST00000396545 CLEC19AQ6UXS0 136 aa13.29□□□□□ -0.28
TNFSF13-205ENST00000396545 SMIM12Q96EX1 92 aa13.29□□□□□ -0.28
TNFSF13-205ENST00000396545 IL36BQ9NZH7 164 aa13.29□□□□□ -0.28
TNFSF13-205ENST00000396545 V9GYV3 84 aa13.29□□□□□ -0.28
TNFSF13-205ENST00000396545 TRAV9-1A0A075B6T8 112 aa13.28□□□□□ -0.28
TNFSF13-205ENST00000396545 BMPR1BO00238 502 aa13.28□□□□□ -0.28
TNFSF13-205ENST00000396545 UBE2CO00762 179 aa13.28□□□□□ -0.28
TNFSF13-205ENST00000396545 S100A6P06703 90 aa13.28□□□□□ -0.28
TNFSF13-205ENST00000396545 SNRPEP62304 92 aaKnown RBP13.28□□□□□ -0.28
TNFSF13-205ENST00000396545 OR5I1Q13606 314 aa13.28□□□□□ -0.28
TNFSF13-205ENST00000396545 LYPD1Q8N2G4 141 aa13.28□□□□□ -0.28
TNFSF13-205ENST00000396545 PPP5D1E7EU14 171 aa13.28□□□□□ -0.28
TNFSF13-205ENST00000396545 TCRAP04437 139 aa13.28□□□□□ -0.28
TNFSF13-205ENST00000396545 FAM3BP58499 235 aaPredicted RBP13.28□□□□□ -0.28
TNFSF13-205ENST00000396545 ERVFC1-1P60608 527 aa13.28□□□□□ -0.28
TNFSF13-205ENST00000396545 SMUG1Q53HV7 270 aa13.28□□□□□ -0.28
TNFSF13-205ENST00000396545 H3BTX0 84 aa13.27□□□□□ -0.29
TNFSF13-205ENST00000396545 NHLRC4P0CG21 123 aaPredicted RBP13.27□□□□□ -0.29
TNFSF13-205ENST00000396545 BAGE2Q86Y30 109 aa13.27□□□□□ -0.29
TNFSF13-205ENST00000396545 KLK15Q9H2R5 256 aa13.27□□□□□ -0.29
TNFSF13-205ENST00000396545 ZFAND3Q9H8U3 227 aa13.27□□□□□ -0.29
TNFSF13-205ENST00000396545 RABAC1Q9UI14 185 aa13.27□□□□□ -0.29
TNFSF13-205ENST00000396545 TRAV34A0A0B4J273 112 aa13.26□□□□□ -0.29
TNFSF13-205ENST00000396545 SLC17A3O00476 420 aa13.26□□□□□ -0.29
TNFSF13-205ENST00000396545 HIST1H2BKO60814 126 aa13.26□□□□□ -0.29
TNFSF13-205ENST00000396545 HIST1H2BJP06899 126 aa13.26□□□□□ -0.29
TNFSF13-205ENST00000396545 HIST1H2BOP23527 126 aa13.26□□□□□ -0.29
TNFSF13-205ENST00000396545 HIST1H2BBP33778 126 aa13.26□□□□□ -0.29
TNFSF13-205ENST00000396545 HIST1H2BDP58876 126 aa13.26□□□□□ -0.29
TNFSF13-205ENST00000396545 HIST1H2BCP62807 126 aa13.26□□□□□ -0.29
TNFSF13-205ENST00000396545 FHL3Q13643 280 aa13.26□□□□□ -0.29
TNFSF13-205ENST00000396545 PDE6HQ13956 83 aa13.26□□□□□ -0.29
TNFSF13-205ENST00000396545 HIST2H2BEQ16778 126 aa13.26□□□□□ -0.29
TNFSF13-205ENST00000396545 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.26□□□□□ -0.29
TNFSF13-205ENST00000396545 C9orf66Q5T8R8 295 aa13.26□□□□□ -0.29
TNFSF13-205ENST00000396545 SIGLEC15Q6ZMC9 328 aa13.26□□□□□ -0.29
TNFSF13-205ENST00000396545 FAM231DQ6ZW35 169 aa13.26□□□□□ -0.29
TNFSF13-205ENST00000396545 MYOZ3Q8TDC0 251 aa13.26□□□□□ -0.29
TNFSF13-205ENST00000396545 C4orf3Q8WVX3 66 aa13.26□□□□□ -0.29
TNFSF13-205ENST00000396545 FRZBQ92765 325 aa13.26□□□□□ -0.29
TNFSF13-205ENST00000396545 HIST1H2BHQ93079 126 aa13.26□□□□□ -0.29
TNFSF13-205ENST00000396545 FMC1Q96HJ9 113 aa13.26□□□□□ -0.29
TNFSF13-205ENST00000396545 HIST1H2BNQ99877 126 aa13.26□□□□□ -0.29
TNFSF13-205ENST00000396545 HIST1H2BMQ99879 126 aa13.26□□□□□ -0.29
TNFSF13-205ENST00000396545 TRBV6-1A0A0K0K1D8 114 aa13.25□□□□□ -0.29
TNFSF13-205ENST00000396545 ARL3P36405 182 aa13.25□□□□□ -0.29
TNFSF13-205ENST00000396545 UBE2G1P62253 170 aa13.25□□□□□ -0.29
TNFSF13-205ENST00000396545 TOMM20LQ6UXN7 152 aa13.25□□□□□ -0.29
TNFSF13-205ENST00000396545 PRR25Q96S07 402 aa13.25□□□□□ -0.29
TNFSF13-205ENST00000396545 MLST8Q9BVC4 326 aa13.25□□□□□ -0.29
TNFSF13-205ENST00000396545 GNB4Q9HAV0 340 aa13.25□□□□□ -0.29
TNFSF13-205ENST00000396545 U3KQK5 164 aa13.25□□□□□ -0.29
TNFSF13-205ENST00000396545 TRGC1P0CF51 173 aa13.24□□□□□ -0.29
TNFSF13-205ENST00000396545 MGST1P10620 155 aaKnown RBP13.24□□□□□ -0.29
TNFSF13-205ENST00000396545 EXOC3-AS1Q8N2X6 119 aa13.24□□□□□ -0.29
TNFSF13-205ENST00000396545 C17orf77Q96MU5 243 aa13.24□□□□□ -0.29
TNFSF13-205ENST00000396545 GPR82Q96P67 336 aa13.24□□□□□ -0.29
TNFSF13-205ENST00000396545 RNASE7Q9H1E1 156 aaKnown RBP13.24□□□□□ -0.29
TNFSF13-205ENST00000396545 NDUFA4O00483 81 aa13.24□□□□□ -0.29
TNFSF13-205ENST00000396545 LTAP01374 205 aa13.24□□□□□ -0.29
TNFSF13-205ENST00000396545 RPL7P18124 248 aaKnown RBP13.24□□□□□ -0.29
TNFSF13-205ENST00000396545 FABP9Q0Z7S8 132 aa13.24□□□□□ -0.29
TNFSF13-205ENST00000396545 RPEL1Q2QD12 228 aa13.24□□□□□ -0.29
TNFSF13-205ENST00000396545 ACTL10Q5JWF8 245 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms