RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 DEFB113Q30KQ7 82 aa12.48□□□□□ -0.41
SNX6-202ENST00000396526 A0A1B0GUS0 222 aa12.47□□□□□ -0.41
SNX6-202ENST00000396526 RNF223E7ERA6 249 aa12.47□□□□□ -0.41
SNX6-202ENST00000396526 PPIFP30405 207 aaKnown RBP12.47□□□□□ -0.41
SNX6-202ENST00000396526 LRRK2Q5S007 2527 aa12.47□□□□□ -0.41
SNX6-202ENST00000396526 IGHV3-66A0A0C4DH42 116 aa12.47□□□□□ -0.41
SNX6-202ENST00000396526 A0A1B0GXF2 115 aa12.47□□□□□ -0.41
SNX6-202ENST00000396526 ZNF207O43670 478 aaKnown RBP12.47□□□□□ -0.41
SNX6-202ENST00000396526 GZMBP10144 247 aa12.47□□□□□ -0.41
SNX6-202ENST00000396526 FOXA3P55318 350 aaPredicted RBP12.47□□□□□ -0.41
SNX6-202ENST00000396526 SLAQ13239 276 aa12.47□□□□□ -0.41
SNX6-202ENST00000396526 GTSF1Q8WW33 167 aa12.47□□□□□ -0.41
SNX6-202ENST00000396526 PRR25Q96S07 402 aa12.47□□□□□ -0.41
SNX6-202ENST00000396526 IGHV3OR16-13A0A075B7E8 117 aa12.47□□□□□ -0.41
SNX6-202ENST00000396526 IGHV3-74A0A0B4J1X5 117 aa12.47□□□□□ -0.41
SNX6-202ENST00000396526 SRSF1Q07955 248 aaKnown RBP eCLIP12.47□□□□□ -0.419e-12■■□□□ 14
SNX6-202ENST00000396526 DEFB112Q30KQ8 113 aa12.47□□□□□ -0.41
SNX6-202ENST00000396526 FLNCQ14315 2725 aa12.46□□□□□ -0.41
SNX6-202ENST00000396526 AMTP48728 403 aa12.46□□□□□ -0.41
SNX6-202ENST00000396526 COL12A1Q99715 3063 aa12.46□□□□□ -0.41
SNX6-202ENST00000396526 IGHV3-49A0A0A0MS15 119 aa12.46□□□□□ -0.42
SNX6-202ENST00000396526 RBAKDNA6NC62 111 aa12.46□□□□□ -0.42
SNX6-202ENST00000396526 HAX1O00165 279 aa12.46□□□□□ -0.42
SNX6-202ENST00000396526 PKIAP61925 76 aa12.46□□□□□ -0.42
SNX6-202ENST00000396526 MRPL53Q96EL3 112 aaKnown RBP12.46□□□□□ -0.42
SNX6-202ENST00000396526 TPPP3Q9BW30 176 aa12.46□□□□□ -0.42
SNX6-202ENST00000396526 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.45□□□□□ -0.42
SNX6-202ENST00000396526 CLPSL1A2RUU4 121 aa12.45□□□□□ -0.42
SNX6-202ENST00000396526 HSBP1O75506 76 aa12.45□□□□□ -0.42
SNX6-202ENST00000396526 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.45□□□□□ -0.42
SNX6-202ENST00000396526 OR4X2Q8NGF9 303 aa12.45□□□□□ -0.42
SNX6-202ENST00000396526 KCNS1Q96KK3 526 aa12.45□□□□□ -0.42
SNX6-202ENST00000396526 ZNF580Q9UK33 172 aa12.45□□□□□ -0.42
SNX6-202ENST00000396526 NUPR1O60356 82 aa12.45□□□□□ -0.42
SNX6-202ENST00000396526 TMEM78Q5T7P6 136 aa12.45□□□□□ -0.42
SNX6-202ENST00000396526 C16orf92Q96LL3 132 aa12.45□□□□□ -0.42
SNX6-202ENST00000396526 SSBP4Q9BWG4 385 aaPredicted RBP12.45□□□□□ -0.42
SNX6-202ENST00000396526 NPFFR1Q9GZQ6 430 aa12.45□□□□□ -0.42
SNX6-202ENST00000396526 U3KQE9 123 aa12.45□□□□□ -0.42
SNX6-202ENST00000396526 ZNF705FA8MVS1 300 aaPredicted RBP12.44□□□□□ -0.42
SNX6-202ENST00000396526 IGHV3-11P01762 117 aa12.44□□□□□ -0.42
SNX6-202ENST00000396526 ZNF705DP0CH99 300 aaPredicted RBP12.44□□□□□ -0.42
SNX6-202ENST00000396526 ZNF705BP0CI00 300 aaPredicted RBP12.44□□□□□ -0.42
SNX6-202ENST00000396526 Q5PR19 223 aa12.44□□□□□ -0.42
SNX6-202ENST00000396526 C16orf54Q6UWD8 224 aa12.44□□□□□ -0.42
SNX6-202ENST00000396526 C8orf49Q96NF6 230 aa12.44□□□□□ -0.42
SNX6-202ENST00000396526 IGFL4Q6B9Z1 124 aa12.44□□□□□ -0.42
SNX6-202ENST00000396526 COX8CQ7Z4L0 72 aa12.44□□□□□ -0.42
SNX6-202ENST00000396526 TP53TG3Q9ULZ0 132 aa12.44□□□□□ -0.42
SNX6-202ENST00000396526 FABP5P3A8MUU1 101 aa12.44□□□□□ -0.42
SNX6-202ENST00000396526 IGHV4-59P01825 116 aa12.44□□□□□ -0.42
SNX6-202ENST00000396526 FAM106AQ4KMX7 169 aa12.44□□□□□ -0.42
SNX6-202ENST00000396526 SH2D1AO60880 128 aa12.43□□□□□ -0.42
SNX6-202ENST00000396526 MAPK1IP1LQ8NDC0 245 aa12.43□□□□□ -0.42
SNX6-202ENST00000396526 C18orf32Q8TCD1 76 aa12.43□□□□□ -0.42
SNX6-202ENST00000396526 USP9YO00507 2555 aaPredicted RBP12.43□□□□□ -0.42
SNX6-202ENST00000396526 GPX1P07203 203 aa12.43□□□□□ -0.42
SNX6-202ENST00000396526 C9orf139Q6ZV77 190 aa12.43□□□□□ -0.42
SNX6-202ENST00000396526 VGLL1Q99990 258 aa12.43□□□□□ -0.42
SNX6-202ENST00000396526 ALKBH7Q9BT30 221 aaPredicted RBP12.43□□□□□ -0.42
SNX6-202ENST00000396526 NAGKQ9UJ70 344 aa12.43□□□□□ -0.42
SNX6-202ENST00000396526 PMCHP20382 165 aa12.43□□□□□ -0.42
SNX6-202ENST00000396526 KLF5Q13887 457 aaPredicted RBP12.43□□□□□ -0.42
SNX6-202ENST00000396526 C8orf86Q6ZUL3 223 aa12.43□□□□□ -0.42
SNX6-202ENST00000396526 EPG5Q9HCE0 2579 aa12.42□□□□□ -0.42
SNX6-202ENST00000396526 A0A096LNT2 108 aa12.42□□□□□ -0.42
SNX6-202ENST00000396526 HLA-DMBP28068 263 aa12.42□□□□□ -0.42
SNX6-202ENST00000396526 GDF5OSQ5U4N7 250 aa12.42□□□□□ -0.42
SNX6-202ENST00000396526 TEX29Q8N6K0 151 aa12.42□□□□□ -0.42
SNX6-202ENST00000396526 ASCL2Q99929 193 aa12.42□□□□□ -0.42
SNX6-202ENST00000396526 ZNF324O75467 553 aaPredicted RBP12.42□□□□□ -0.42
SNX6-202ENST00000396526 IGLV1-40P01703 118 aa12.42□□□□□ -0.42
SNX6-202ENST00000396526 CRIP1P50238 77 aa12.42□□□□□ -0.42
SNX6-202ENST00000396526 RPL11P62913 178 aaKnown RBP12.42□□□□□ -0.42
SNX6-202ENST00000396526 TMEM89A2RUT3 159 aa12.41□□□□□ -0.42
SNX6-202ENST00000396526 APOHP02749 345 aaPredicted RBP12.41□□□□□ -0.42
SNX6-202ENST00000396526 ORM1P02763 201 aa12.41□□□□□ -0.42
SNX6-202ENST00000396526 PRB4P10163 310 aaPredicted RBP12.41□□□□□ -0.42
SNX6-202ENST00000396526 NTF3P20783 257 aa12.41□□□□□ -0.42
SNX6-202ENST00000396526 Q8TAT8 98 aa12.41□□□□□ -0.42
SNX6-202ENST00000396526 KLK15Q9H2R5 256 aa12.41□□□□□ -0.42
SNX6-202ENST00000396526 PRDM13Q9H4Q3 707 aa12.41□□□□□ -0.42
SNX6-202ENST00000396526 TMSB15BA0A087X1C1 80 aa12.41□□□□□ -0.42
SNX6-202ENST00000396526 IGHV4-31P0DP07 118 aa12.41□□□□□ -0.42
SNX6-202ENST00000396526 LINC00587B1AMM8 73 aa12.41□□□□□ -0.42
SNX6-202ENST00000396526 F2Z2F3 143 aa12.41□□□□□ -0.42
SNX6-202ENST00000396526 CYB5R2Q6BCY4 276 aa12.41□□□□□ -0.42
SNX6-202ENST00000396526 CDPF1Q6NVV7 123 aa12.41□□□□□ -0.42
SNX6-202ENST00000396526 PRSS57Q6UWY2 283 aa12.41□□□□□ -0.42
SNX6-202ENST00000396526 PEF1Q9UBV8 284 aaKnown RBP12.41□□□□□ -0.42
SNX6-202ENST00000396526 PTPN13Q12923 2485 aa12.4□□□□□ -0.42
SNX6-202ENST00000396526 NAV2Q8IVL1 2488 aa12.4□□□□□ -0.42
SNX6-202ENST00000396526 VPREB3Q9UKI3 123 aa12.4□□□□□ -0.42
SNX6-202ENST00000396526 ANKRD17O75179 2603 aaKnown RBP12.4□□□□□ -0.42
SNX6-202ENST00000396526 ZNF138P52744 262 aa12.4□□□□□ -0.42
SNX6-202ENST00000396526 RNASEKQ6P5S7 137 aaKnown RBP12.4□□□□□ -0.42
SNX6-202ENST00000396526 RNF182Q8N6D2 247 aa12.4□□□□□ -0.42
SNX6-202ENST00000396526 GLMPQ8WWB7 406 aa12.4□□□□□ -0.42
SNX6-202ENST00000396526 LOC102724200A0A096LPH7 203 aaPredicted RBP12.39□□□□□ -0.43
SNX6-202ENST00000396526 ARMS2P0C7Q2 107 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms