RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 GOLT1AQ6ZVE7 132 aa15.4■□□□□ 0.06
VCPKMT-202ENST00000395860 TVP23CQ96ET8 276 aa15.4■□□□□ 0.06
VCPKMT-202ENST00000395860 MS4A6AQ9H2W1 248 aa15.4■□□□□ 0.06
VCPKMT-202ENST00000395860 TRAV34A0A0B4J273 112 aa15.39■□□□□ 0.05
VCPKMT-202ENST00000395860 DNASE2O00115 360 aaPredicted RBP15.39■□□□□ 0.05
VCPKMT-202ENST00000395860 SNAPINO95295 136 aa15.39■□□□□ 0.05
VCPKMT-202ENST00000395860 PRB4P10163 310 aaPredicted RBP15.39■□□□□ 0.05
VCPKMT-202ENST00000395860 LCN12Q6JVE5 192 aa15.39■□□□□ 0.05
VCPKMT-202ENST00000395860 WFDC3Q8IUB2 231 aa15.39■□□□□ 0.05
VCPKMT-202ENST00000395860 ARL6IP6Q8N6S5 226 aa15.39■□□□□ 0.05
VCPKMT-202ENST00000395860 WNK1Q9H4A3 2382 aa15.39■□□□□ 0.05
VCPKMT-202ENST00000395860 ZNF705FA8MVS1 300 aaPredicted RBP15.39■□□□□ 0.05
VCPKMT-202ENST00000395860 M0R036 132 aa15.39■□□□□ 0.05
VCPKMT-202ENST00000395860 TFPI2P48307 235 aa15.39■□□□□ 0.05
VCPKMT-202ENST00000395860 SAMD13Q5VXD3 122 aa15.39■□□□□ 0.05
VCPKMT-202ENST00000395860 SDF2L1Q9HCN8 221 aa15.39■□□□□ 0.05
VCPKMT-202ENST00000395860 ISLRO14498 428 aa15.38■□□□□ 0.05
VCPKMT-202ENST00000395860 ID1P41134 155 aa15.38■□□□□ 0.05
VCPKMT-202ENST00000395860 GNG4P50150 75 aa15.38■□□□□ 0.05
VCPKMT-202ENST00000395860 TAS2R60P59551 318 aa15.38■□□□□ 0.05
VCPKMT-202ENST00000395860 PAFAH1B2P68402 229 aa15.38■□□□□ 0.05
VCPKMT-202ENST00000395860 TMEM183BQ1AE95 376 aa15.38■□□□□ 0.05
VCPKMT-202ENST00000395860 RBPMS2Q6ZRY4 209 aaKnown RBP15.38■□□□□ 0.05
VCPKMT-202ENST00000395860 DCANP1Q8TF63 244 aa15.38■□□□□ 0.05
VCPKMT-202ENST00000395860 MRPL53Q96EL3 112 aaKnown RBP15.38■□□□□ 0.05
VCPKMT-202ENST00000395860 FMC1Q96HJ9 113 aa15.38■□□□□ 0.05
VCPKMT-202ENST00000395860 SGK494Q96LW2 274 aa15.38■□□□□ 0.05
VCPKMT-202ENST00000395860 SIGLEC8Q9NYZ4 499 aa15.38■□□□□ 0.05
VCPKMT-202ENST00000395860 TRBV20OR9-2A0A075B6H5 130 aa15.37■□□□□ 0.05
VCPKMT-202ENST00000395860 SERTM2A0A1B0GWG4 89 aa15.37■□□□□ 0.05
VCPKMT-202ENST00000395860 C9JCJ5 164 aa15.37■□□□□ 0.05
VCPKMT-202ENST00000395860 S100A9P06702 114 aaKnown RBP15.37■□□□□ 0.05
VCPKMT-202ENST00000395860 PSG3Q16557 428 aa15.37■□□□□ 0.05
VCPKMT-202ENST00000395860 DEFB114Q30KQ6 69 aa15.37■□□□□ 0.05
VCPKMT-202ENST00000395860 CENPWQ5EE01 88 aa15.37■□□□□ 0.05
VCPKMT-202ENST00000395860 CLRN3Q8NCR9 226 aa15.37■□□□□ 0.05
VCPKMT-202ENST00000395860 KLF12Q9Y4X4 402 aa15.37■□□□□ 0.05
VCPKMT-202ENST00000395860 PGPEP1LA6NFU8 196 aa15.36■□□□□ 0.05
VCPKMT-202ENST00000395860 PNRC1Q12796 327 aaPredicted RBP15.36■□□□□ 0.05
VCPKMT-202ENST00000395860 TMEM158Q8WZ71 300 aa15.36■□□□□ 0.05
VCPKMT-202ENST00000395860 C20orf173Q96LM9 149 aa15.36■□□□□ 0.05
VCPKMT-202ENST00000395860 SAP30O75446 220 aa15.36■□□□□ 0.05
VCPKMT-202ENST00000395860 ADIRFQ15847 76 aa15.36■□□□□ 0.05
VCPKMT-202ENST00000395860 TMEM61Q8N0U2 210 aa15.36■□□□□ 0.05
VCPKMT-202ENST00000395860 LINC00482Q8N8I6 264 aa15.36■□□□□ 0.05
VCPKMT-202ENST00000395860 TMEM75Q8N9X5 138 aa15.36■□□□□ 0.05
VCPKMT-202ENST00000395860 ZNF738Q8NE65 137 aa15.36■□□□□ 0.05
VCPKMT-202ENST00000395860 IGF2BP2-AS1Q96M15 143 aa15.36■□□□□ 0.05
VCPKMT-202ENST00000395860 IGKV2-40A0A087WW87 121 aaPredicted RBP15.35■□□□□ 0.05
VCPKMT-202ENST00000395860 TRAV8-1A0A0A6YYK1 113 aa15.35■□□□□ 0.05
VCPKMT-202ENST00000395860 K7EQG2 157 aa15.35■□□□□ 0.05
VCPKMT-202ENST00000395860 IGKV2D-40P01614 121 aaPredicted RBP15.35■□□□□ 0.05
VCPKMT-202ENST00000395860 RPL23P62829 140 aaKnown RBP15.35■□□□□ 0.05
VCPKMT-202ENST00000395860 ZNF747Q9BV97 191 aa15.35■□□□□ 0.05
VCPKMT-202ENST00000395860 CD300EQ496F6 205 aaPredicted RBP15.34■□□□□ 0.05
VCPKMT-202ENST00000395860 C3orf56Q8N813 242 aa15.34■□□□□ 0.05
VCPKMT-202ENST00000395860 AURKAIP1Q9NWT8 199 aaPredicted RBP15.34■□□□□ 0.05
VCPKMT-202ENST00000395860 PRAC2D3DTV9 90 aa15.34■□□□□ 0.05
VCPKMT-202ENST00000395860 TSPAN4O14817 238 aa15.34■□□□□ 0.05
VCPKMT-202ENST00000395860 FLI1Q01543 452 aaPredicted RBP15.34■□□□□ 0.05
VCPKMT-202ENST00000395860 ATRAIDQ6UW56 229 aa15.34■□□□□ 0.05
VCPKMT-202ENST00000395860 C12orf54Q6X4T0 127 aa15.34■□□□□ 0.05
VCPKMT-202ENST00000395860 LINC01551Q86U37 167 aa15.34■□□□□ 0.05
VCPKMT-202ENST00000395860 BAGE2Q86Y30 109 aa15.34■□□□□ 0.05
VCPKMT-202ENST00000395860 OCC1Q8TAD7 63 aa15.34■□□□□ 0.05
VCPKMT-202ENST00000395860 LY96Q9Y6Y9 160 aa15.34■□□□□ 0.05
VCPKMT-202ENST00000395860 IGLV2-11P01706 119 aa15.33■□□□□ 0.04
VCPKMT-202ENST00000395860 SNRPD3P62318 126 aaKnown RBP15.33■□□□□ 0.04
VCPKMT-202ENST00000395860 PRNTQ86SH4 94 aa15.33■□□□□ 0.04
VCPKMT-202ENST00000395860 Q86TA4 180 aa15.33■□□□□ 0.04
VCPKMT-202ENST00000395860 PSG8Q9UQ74 426 aa15.32■□□□□ 0.04
VCPKMT-202ENST00000395860 TRAV25A0A0B4J276 109 aa15.31■□□□□ 0.04
VCPKMT-202ENST00000395860 TRBV6-1A0A0K0K1D8 114 aa15.31■□□□□ 0.04
VCPKMT-202ENST00000395860 RBAKDNA6NC62 111 aa15.31■□□□□ 0.04
VCPKMT-202ENST00000395860 LTAP01374 205 aa15.31■□□□□ 0.04
VCPKMT-202ENST00000395860 ZNF688P0C7X2 276 aa15.31■□□□□ 0.04
VCPKMT-202ENST00000395860 FAM24BQ8N5W8 94 aa15.31■□□□□ 0.04
VCPKMT-202ENST00000395860 NHLRC2Q8NBF2 726 aa15.31■□□□□ 0.04
VCPKMT-202ENST00000395860 TRAV2A0A0B4J234 112 aa15.31■□□□□ 0.04
VCPKMT-202ENST00000395860 FBLL1A6NHQ2 334 aaKnown RBP15.31■□□□□ 0.04
VCPKMT-202ENST00000395860 RHEBQ15382 184 aa15.31■□□□□ 0.04
VCPKMT-202ENST00000395860 VGLL1Q99990 258 aa15.31■□□□□ 0.04
VCPKMT-202ENST00000395860 RPS10P5Q9NQ39 176 aa15.31■□□□□ 0.04
VCPKMT-202ENST00000395860 C7orf77A4D0Y5 90 aa15.3■□□□□ 0.04
VCPKMT-202ENST00000395860 B4DEV8 164 aa15.3■□□□□ 0.04
VCPKMT-202ENST00000395860 IGLV2-8P01709 118 aa15.3■□□□□ 0.04
VCPKMT-202ENST00000395860 MGST1P10620 155 aaKnown RBP15.3■□□□□ 0.04
VCPKMT-202ENST00000395860 PSMG4Q5JS54 123 aa15.3■□□□□ 0.04
VCPKMT-202ENST00000395860 SPAG8Q99932 426 aaPredicted RBP15.3■□□□□ 0.04
VCPKMT-202ENST00000395860 K7EN84 100 aa15.29■□□□□ 0.04
VCPKMT-202ENST00000395860 ERCC8Q13216 396 aa15.29■□□□□ 0.04
VCPKMT-202ENST00000395860 SMIM12Q96EX1 92 aa15.29■□□□□ 0.04
VCPKMT-202ENST00000395860 IZUMO1RA6ND01 250 aa15.29■□□□□ 0.04
VCPKMT-202ENST00000395860 SCO1O75880 301 aa15.29■□□□□ 0.04
VCPKMT-202ENST00000395860 SHISA2Q6UWI4 295 aa15.29■□□□□ 0.04
VCPKMT-202ENST00000395860 OR10J6PQ8NGY7 276 aa15.29■□□□□ 0.04
VCPKMT-202ENST00000395860 ISOC2Q96AB3 205 aa15.29■□□□□ 0.04
VCPKMT-202ENST00000395860 ZFP30Q9Y2G7 519 aa15.29■□□□□ 0.04
VCPKMT-202ENST00000395860 ATRQ13535 2644 aa15.29■□□□□ 0.04
VCPKMT-202ENST00000395860 TENM1Q9UKZ4 2725 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms